Campylobacter porcelli: CSUIS_0089
Help
Entry
CSUIS_0089 CDS
T05900
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
camy
Campylobacter porcelli
Pathway
camy03030
DNA replication
camy03430
Mismatch repair
camy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
camy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CSUIS_0089 (dnaE)
03430 Mismatch repair
CSUIS_0089 (dnaE)
03440 Homologous recombination
CSUIS_0089 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
camy03032
]
CSUIS_0089 (dnaE)
03400 DNA repair and recombination proteins [BR:
camy03400
]
CSUIS_0089 (dnaE)
Enzymes [BR:
camy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CSUIS_0089 (dnaE)
DNA replication proteins [BR:
camy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CSUIS_0089 (dnaE)
DNA repair and recombination proteins [BR:
camy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CSUIS_0089 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ARQ99945
UniProt:
A0A1X9SUT6
LinkDB
All DBs
Position
94270..98256
Genome browser
AA seq
1328 aa
AA seq
DB search
MSLDFTHLHLHTEYSLLDGANKIKTLAKRLKEINIKSCAITDHGNMFGAIEFYKGMKAEG
IKPIIGLEAYIHNSDDIASKESRYRFHLCLFAKDEIGYQNLMYLSSMSYIKGYYYYPRIN
KKLLREHSQGLVCSSACLAGEVNFHLNLSERNIKRGAGGYEAAKAAALEYKDIFGDDFYL
EIMRHGIFDQQRIDSDIIRLSKETGIKLIATNDAHYTNKDSAIAQKIFVYISANKNFDES
VREQVLSEFYAKSPEQMSEIFADIPEVVSNTQEIVNKCNLEIKLGNATPPNFKFTQEYAK
NRDLPLPNPDMEYDLDNDGVLFEYECKEGLKKRLEFIDPSKHQIYKDRLELEISTIKNMK
FPGYMLIVADFINEAKKRGIPVGPGRGSAAGSLVAYALRITDLDPIPYNLLFERFLNPER
ISMPDIDVDFCQNRRGEVIDYVIQKYGQYNVAQVATFGKLLAKGVIRDVARVMGMPYAEA
DAMAKLIPDELGIALQGYTNKKGEFEPGAFEKEPKIGELIQNNELARSVWKYACELEGLN
RNPGMHAAGIVISNEELWKKAPLWRQSNAEDGHYVTQYAKDYLEEVDLIKFDFLGLKTLT
VIDNAIKLVKARFNQDILWEKIDFNDPKTYETIQSGNTLGIFQIESSGMQKLAAKLRPDC
FEDVIAMIALYRPGPLNSGMVDDFIDIKHGKKSVEYAFDALRPILEPTYGVIVYQEQVMQ
VVQTVGGFSLGGADLVRRAMSKKKEDEMLRLKTQYLDGASKNGFDRDKADVLFELIMKFA
EYGFNKSHSAAYALITFQTAYLKTYYPAEFMAALLTSEENNADKITKYIEEIRRLNIELL
PPSVSKSKSEFSVINSDGNDAIIYGLGAIKGVGGSAVDDIIAFRETGLDSLEDLVSKSDC
TAVNKRVYEALIKSGALDEFGYSRKTLMQNLEYITDQSKKSSDIKREAEFSLFGDDESMN
NIKLSLNLAQDEFSQRELLGFEQEFLGVYISGHPLDEFRSSIEAISHTNSSEFDSIDDGS
EIIVIGKIEDISVKITKSGNKMGIIAILDMQGSMEATVFSHMQKIEALPKDELNKPLVFK
MLLNKDEQQIRLKVNEIYTLEEAQNTKITLKSSKITAEEISENKEYFDSIKHSSIVDILK
SAKGGEHLIIAKINNISIKDTKSGGKMAVLSVADKSSNADMFAFDVACMQASEISDTSRL
YALKITPPRDANSKMIINQIIDIDEAKNGDIALRNAPKKRAQKQDEVEKEPSFNIVGKLE
IDLKLSSLNRSKINQIYELASRYNATNGNKKSLILRVVDENRAQIMQFVTEFSVTDEFQN
ELNTLLAG
NT seq
3987 nt
NT seq
+upstream
nt +downstream
nt
atgagcttggattttacccatttgcatttgcataccgaatactctttattagatggtgct
aataagattaaaaccttagccaaacgattaaaagagataaatatcaaatcttgtgctatt
accgaccacggaaatatgtttggtgcgattgagttttataagggtatgaaggctgaaggg
ataaagccaattatcggacttgaggcatatatacacaatagcgatgatatagcctctaaa
gagagtagatatagatttcacctttgcttatttgctaaagatgagataggctatcaaaat
ttaatgtatctaagctcaatgagctatataaagggatattactactatccaaggataaat
aaaaagcttttaagagagcatagtcaggggttagtttgtagctcagcgtgcttagctgga
gaggtaaatttccatctaaatttaagtgagagaaatatcaaaagaggcgctggtggatat
gaagctgccaaggctgcagcactagagtataaagatatatttggcgatgatttttatctt
gaaattatgcgtcatgggatatttgaccagcaacgaatagatagcgatattatcagatta
tccaaagaaacaggcataaaactaatcgccacaaatgacgctcactacaccaataaagat
agcgccatagctcaaaaaatctttgtctatatctcagcgaataaaaattttgatgagagt
gtaagagagcaagttttgagcgaattttatgctaaatctcctgagcagatgagcgagatt
tttgctgatattccagaggttgtatccaacactcaagagatagtaaataagtgtaatttg
gagataaaattaggcaatgccactccgccaaatttcaaatttacccaagaatacgctaaa
aatagagatctaccattgccaaatccagatatggagtatgatttggataatgatggggtt
ttgtttgagtatgagtgtaaagaggggcttaagaagcgtttagagtttattgatcctagc
aaacatcaaatttacaaagataggcttgagctagagatttcaactattaaaaatatgaaa
ttcccgggctacatgctaatcgtggctgattttatcaatgaggctaaaaagcgtggcatt
ccagtaggccctgggcgtggctcagcagctggaagcttggtggcttatgcgcttcgcatt
actgaccttgatccaatcccatataatttgctatttgagagatttttaaatccagagcgt
attagtatgcctgatattgatgtggatttttgtcaaaatcgcagaggtgaagttattgat
tatgtgatacaaaagtatggtcagtataatgtcgctcaagtggctacttttggtaagctt
ttagccaaaggcgttataagagatgtggctagagtaatgggtatgccatatgctgaagct
gatgcgatggcaaagctcattccagacgagctaggtattgccttacaaggctatactaat
aaaaagggtgaatttgagcctggagcatttgaaaaagagcctaaaataggggagttaata
caaaacaacgagctagcaagaagcgtgtggaagtatgcttgcgagcttgaagggttaaat
agaaacccaggtatgcacgctgctggtatcgtaattagcaatgaagaattatggaaaaaa
gccccactatggagacaaagcaacgctgaagatggtcattatgtaacgcagtatgccaag
gactatcttgaagaggtggatctaatcaaatttgactttttagggcttaaaactttaacc
gtaatcgacaatgcaattaagctagtcaaagctagatttaatcaagatatattgtgggaa
aagatcgattttaacgaccctaaaacctatgaaaccatacaaagtggcaatacccttgga
attttccaaatagaatcaagtggtatgcaaaagctagctgcaaagctaagaccagactgc
tttgaagatgttattgctatgattgctctttatcgcccagggcctttaaattcaggaatg
gtggatgattttatagatattaaacatggcaaaaagagtgtagaatacgcctttgatgcc
ttgcgaccgatactagagcctacatatggggttatagtctatcaagagcaagttatgcaa
gtagttcaaaccgtgggtggatttagccttggtggagcggatttagtgcgtagggctatg
agtaagaaaaaagaagatgagatgctaaggctaaaaactcagtatctagatggtgcttct
aaaaatggatttgatagggataaggctgatgtgctttttgagttgattatgaaatttgca
gagtatgggtttaataaatcccactcagcagcttacgcacttatcacattccaaacggca
tatttaaagacatattatccggctgaatttatggcagctcttcttactagtgaagagaat
aacgctgataaaatcactaaatatatagaggagattcgccgtttaaatatcgagctactt
ccccctagcgttagcaagagcaaaagtgaatttagcgttattaatagtgatggtaatgac
gctattatctatggtctaggagccattaagggtgttggtggctcagcggttgatgatatt
atagcatttagagaaaccggattagatagcttagaagatttagtatctaaaagcgattgc
accgctgtaaataagcgtgtttatgaggcactcataaaatcgggtgctttagatgaattt
ggctattctagaaagaccttaatgcaaaatcttgagtatataacagaccaatctaaaaaa
agctctgatattaaaagagaggctgagttttcactatttggcgatgatgagagtatgaat
aatataaagctaagcttaaatttagctcaagatgaatttagccaaagggagcttttaggc
tttgaacaggagtttttaggcgtttatattagcggacatccgcttgatgagtttagaagt
agtattgaagcgatttcgcatacgaattcatcagaatttgatagcattgatgatggaagt
gagattatcgttataggtaagattgaagatatatctgtaaagataactaaatctggcaat
aaaatgggtataatcgccattcttgatatgcaaggaagtatggaagcaacggtgttttct
catatgcaaaagatcgaagccttgccaaaagatgagctaaataaaccacttgtatttaaa
atgcttttaaataaagatgagcaacaaatcagactaaaagtaaatgaaatttacaccctt
gaagaggcacaaaacactaaaataacgctaaaatctagcaaaatcactgctgaagagata
agtgagaataaagagtattttgatagcattaagcactctagtatcgtggatatattaaaa
agtgctaaaggtggtgagcaccttataattgctaagataaataatatctctattaaggat
actaaatctggcggcaaaatggcggtgctaagcgtagcagataaaagctcaaatgccgat
atgttcgcctttgatgtggcgtgtatgcaagctagtgagataagcgatacaagtagatta
tatgcgttaaaaatcacgccaccaagagatgcgaattctaagatgattataaatcaaata
atcgatatagatgaggcaaaaaatggagatatagcccttagaaacgcaccaaaaaagaga
gctcaaaagcaagacgaggtagaaaaagagcctagctttaatatagttggcaagctagag
attgatttgaaattaagcagtttaaataggagtaaaattaatcaaatttatgaattagct
agtagatataatgctacaaatgggaataaaaagagcttgattttaagggttgtggatgaa
aatagggctcagattatgcagtttgtaactgaatttagcgtaactgatgaatttcaaaat
gagctaaatactcttttggctgggtag
DBGET
integrated database retrieval system
