Campylobacter porcelli: CSUIS_0250
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Entry
CSUIS_0250 CDS
T05900
Symbol
rho
Name
(GenBank) transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
camy
Campylobacter porcelli
Pathway
camy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
camy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CSUIS_0250 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
camy03021
]
CSUIS_0250 (rho)
03019 Messenger RNA biogenesis [BR:
camy03019
]
CSUIS_0250 (rho)
Transcription machinery [BR:
camy03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CSUIS_0250 (rho)
Messenger RNA biogenesis [BR:
camy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CSUIS_0250 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
AAA_25
ATPase_2
Ploopntkinase3
AAA
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
ARR00095
UniProt:
A0A1X9SV21
LinkDB
All DBs
Position
248641..249957
Genome browser
AA seq
438 aa
AA seq
DB search
MESKETTQQTKKQHTRTHTPVDGYKIEELRLQDLDSLVAIAEEVGVQNPREFRRQELVFE
ILKAQTKQGGFILFTGILEIVEGGYGFLRSTDANLSDSANDTYVSLSQIKKFALRVGDII
TGQVREPREQEKYYALLKIEAINYKSIAEAKERPLFDNLTPLFPNQKIQLEYDPMKLTGR
VLDLFTPIGKGQRGLIVAPPRTGKTELMKELAHGITRNHPEVELIVLLIDERPEEVTDMQ
RSVRGEVFSSTFDLPASNHVRVAELVIEKAKRLVEMGKDVVILLDSITRLARAYNTVTPS
SGKVLSGGVDANALHKPKRFFGAARNIENGGSLTIVATALIDTGSRMDDVIFEEFKGTGN
SEIILDRTISDRRIYPAVNILKSGTRKDELLQGSDDLGKIWAIRNIIATMDDIEALKFLY
SKMLKTKNNKELLGIMNE
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcaaggaaactactcaacaaaccaaaaaacagcacactcgcacccatacacca
gttgatggctataagatagaagagcttagacttcaagatttagatagcttagtagcaatc
gctgaagaagtaggtgtgcaaaatcctagagaatttcgtcgccaagagcttgtatttgaa
attttaaaagcacaaaccaagcaaggtggatttatcttatttactggaattttagagatt
gtagagggcggatatggctttttacgctctactgatgcgaatttgagcgattcggcaaat
gatacttatgtcagcctaagccagattaaaaaatttgccctaagagttggcgatattatc
acagggcaggtgcgagaaccaagagagcaagagaagtattatgctctattaaaaatagaa
gctataaattataaatccatagccgaagccaaagagcggccattatttgataacctaact
ccattatttccaaatcaaaaaattcaattagagtatgatccgatgaagcttacaggtcgt
gtgcttgatctttttactccaattggtaaggggcaacgaggtctaatagtagcaccacct
agaaccggtaaaaccgagcttatgaaagagttagctcacggcattactagaaatcatcca
gaagttgagctaatagtgcttttaatagatgagcgtccagaagaggttacagatatgcaa
cgcagcgtacgtggcgaggtctttagctctacttttgatttaccagcgtcaaatcatgta
agggtagctgaattggtaatcgaaaaggccaaaaggctagtagagatgggtaaagatgta
gtaatcttgctagatagtataacccgccttgcaagggcgtataacacagtaacgccaagt
agcggtaaagttttaagcggtggcgtggacgcaaatgcactgcataaaccaaagagattt
tttggtgcagctagaaatatagaaaatggcggaagtctaaccatagtagcaaccgcattg
atagatacgggttctagaatggatgatgtgatatttgaagagtttaaaggcactggtaat
agcgagattatactagatcgcaccatttcagatcgtagaatttacccagctgtaaatata
ctcaaatcaggcactagaaaagatgagctactacaaggtagcgatgatctaggtaaaatc
tgggctataagaaatattatagctacgatggatgatatagaggctcttaaattcctatac
tctaaaatgctaaaaaccaaaaacaataaagagcttttgggtataatgaacgaataa
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