KEGG   Campylobacter porcelli: CSUIS_0598
Entry
CSUIS_0598        CDS       T05900                                 
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
camy  Campylobacter porcelli
Pathway
camy03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:camy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CSUIS_0598 (rpoB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:camy03021]
    CSUIS_0598 (rpoB)
   03400 DNA repair and recombination proteins [BR:camy03400]
    CSUIS_0598 (rpoB)
Enzymes [BR:camy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CSUIS_0598 (rpoB)
Transcription machinery [BR:camy03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     CSUIS_0598 (rpoB)
DNA repair and recombination proteins [BR:camy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      CSUIS_0598 (rpoB)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1 RnfC_N
Other DBs
NCBI-ProteinID: ARR00419
UniProt: A0A1X9SWB8
LinkDB
Position
575982..580121
AA seq 1379 aa
MLNSLYSGNRLRVDFSNVAKEIDVPNLLQLQKKSFDHFLNLDNSQTESGIEKVFKSIFPI
HDPQNRLSLEYVSSEIGKPRYTIRECMERGLTYSVNLKIKIRLIVHDRDEKTGEKIGVKD
IKEQEIFVREIPLMTDRISFIINGVERVVVNQLHRSPGVIFKEEESPTVVNKLIYTAQII
PDRGSWLYFEYDTKDVLYVRINKRRKVPITILFRALGYKKQDIVKLFYPMQTLKIQNNKF
LVKFNPDDFTGRVDYDIKDENGNILHQAGKRLTRKKADKLIEDGLKFIEYPLETLVNRYL
ASPVIDKDSGEVLYDTLTQLDESKIAKIANEQDSIEIANDLANGVDDAIINSFLQDYETL
KLLKQTESVEDENDLAAIRIYKVMRPGEPVVKEAARSFVNDLFFNPERYDLTKVGRMKMN
HKLGLNAPDYVTVLTNEDIIKTAKYLIKVKNGQGYIDDRDHLGNRRIRSIGELLANELHL
GFVKMQKAIRDKFTSLSNNIDEIMPYDLVNPKMITTTIMEFFTGGQLSQFMDQTNPLSEI
THKRRLSALGEGGLVKERAGFEVRDVHPTHYGRICPVETPEGQNIGLINTLSTYAKVNDL
GFVESPYRKVENGKVTNEIVYLTATQEEGHIIAPASTILDENGVIAEDLIEVRQDGEMIL
AKRDDVTLIDLCSGMVMGVAASLIPFLEHDDANRALMGSNMQRQAVPLLKSTAPIVGTGM
EAIVARDAWEAIKAKRGGVIEKVDNKNIFILGEDENGPYIDQYTMEKNMRTNQNTTFNQH
PIVKKGQKVEAGQIIADGSSMDQGELAIGKNALIAFMPWNGYNYEDAIVMSERMIRTDAF
TSVHIYEKEIEARELKDGVEEITRDIPNMKEEEIEHLDESGIVKIGTHIKPGMILVGKVS
PKGEVKPTPEERLLRAIFGEKAGHVVNKSLYAPASMEGVVIDVKIFTKKGYEKDSRSFQA
YEDEKNILEKEHHDRLLMLDREEMLRVTALLASNELQSELEVGKTTYKKGQKIKKEDLAN
INRFTLNSYVKNFNKDVQKSYEDMKAYFQNEKKKLKDEHDAKLEILEKDDILPSGVVKLV
KVYVATKRKLKVGDKMAGRHGNKGIVSNIVPDVDMPYLPDGRSVDIVLNPLGVPSRMNIG
QILESHLGLVGMRLGEQIQEIFDRKSKEWIKELRSKMIEIASVSRLMDAKAMLEKIDDDK
LIEYARDWASGVRFATPIFEGVKPEEFNKLFEMAKIDMDGKTELYDGRTGSKMAERVNVG
CMYMLKLHHLVDEKVHARSTGPYSLVTQQPVGGKALSGGQRFGEMEVWALEAYGAAHTLR
EMLTVKSDDVEGRWLAYKALTKGENVPSTGIPETFFVLTNELKSLALDVEIYDEDSNNE
NT seq 4140 nt   +upstreamnt  +downstreamnt
atgttaaatagcctttattctggaaatcgtcttagagtagatttttctaatgttgctaaa
gagattgatgttccaaatttattacaattacaaaaaaagagttttgatcattttttaaat
cttgataattcacaaactgaaagcggaatcgaaaaagtatttaaatctatttttcctatc
cacgatccgcaaaatagactttcacttgagtatgtcagtagcgagataggtaagcctaga
tacacaattagagagtgtatggaaagaggtttgacatattctgtaaatttaaaaataaaa
attagattaatagttcatgatagagatgaaaaaacaggtgagaaaatcggggtaaaagat
ataaaagaacaagagatatttgttcgcgaaattcctttgatgactgatagaatctcattt
attattaatggtgttgaaagagttgtagtcaatcaattacacagaagtcctggtgttatt
ttcaaagaagaagagagccctacagttgtaaataaattgatatatacagctcaaattatt
ccagatcgtggctcttggttatattttgagtatgatactaaagatgtattatatgtccgt
attaataagcgtcgcaaggttcctataaccatcttatttagagctttagggtataaaaag
caagatatcgtcaaactattttatcctatgcaaactctaaaaattcaaaataataaattt
ttagtgaaatttaatccagatgatttcactggtagagttgattatgatataaaagatgaa
aatggtaatattttacatcaagctggtaaaagattaactagaaaaaaagctgataaatta
atagaagacggtcttaaattcatcgaatatccacttgaaacactggtaaatagatattta
gctagtccagttatagataaagatagtggcgaagttttatatgatactcttactcagctt
gatgagagtaaaatagctaaaatagccaatgagcaagatagtattgagattgctaatgat
ttggcaaatggcgtcgatgatgctattattaactcatttttacaagattatgagacttta
aagctacttaagcaaactgaaagtgtagaggatgaaaacgatctagccgcaattagaatt
tataaggtaatgcgccctggtgagcctgtggttaaagaggctgctagaagctttgttaat
gatctattttttaatccagagagatatgatttaaccaaagttggccgtatgaagatgaac
cataaattaggtttaaatgcacctgattatgttacagttttgacaaatgaggatattatc
aaaactgccaaatatctcatcaaagttaaaaatggtcaaggctatatcgatgatagagat
cacttaggtaatcgtcgtattcgctctattggtgagcttttggctaatgagcttcatctt
ggttttgtcaagatgcaaaaagctattagagataaattcacaagccttagcaataacatt
gatgagattatgccttatgatttagtaaatcctaagatgataactacaactattatggag
tttttcactggcggtcagttaagtcagtttatggatcagacaaatccgcttagcgagatt
acgcataaacgcagattatcagcacttggcgaaggaggcttggtaaaagagagagctgga
tttgaagttcgtgatgtccatccaactcactatggtagaatttgcccagttgagactcca
gaaggtcaaaatatcggtcttataaacactctttctacatatgcgaaggtaaatgatctt
ggctttgtagaatccccatatcgcaaggtagaaaatggtaaggttacaaatgagattgta
tatcttaccgcaactcaagaagaaggacatatcatagctccagcttctacaattttagat
gaaaatggtgtgatagctgaggatttaatagaggttagacaagatggcgagatgattctt
gctaagagagatgatgttactctaattgacctttgtagcgggatggtaatgggcgttgct
gcctctttaatcccatttttagaacacgatgatgctaaccgtgctttgatgggttcaaat
atgcagcgtcaagctgtgccgcttttaaaatctactgctcctattgttgggactggtatg
gaggctatagttgctcgtgatgcttgggaggctattaaagcaaaacgaggcggtgttatt
gaaaaagttgataataaaaatatatttattttaggcgaagatgagaatggtccatatata
gatcaatatactatggaaaaaaatatgcgtaccaaccaaaatacgacatttaaccaacat
ccaatcgttaaaaaaggacaaaaagtagaggctggtcaaataatagctgatggctctagt
atggatcaaggtgagttagcaataggtaaaaacgcactgatcgcatttatgccatggaat
ggatataactacgaagatgccatcgtaatgagcgaaagaatgattcgcactgacgctttt
actagcgttcatatttatgaaaaagagattgaagctagagagcttaaagatggtgtagag
gagattactagagatattcctaatatgaaagaagaggagatcgagcacttagatgagagt
ggtatcgtaaaaatcggaactcatataaaaccaggtatgatcttagtaggtaaggtatct
ccaaaaggtgaagtcaagccaaccccagaagagagacttctaagggctatatttggtgag
aaggccggtcatgtggtaaataaatctttatatgctccagctagtatggaaggggtggta
attgatgttaaaatctttactaaaaaagggtatgaaaaagactcaagatcatttcaagct
tatgaagatgaaaaaaatattttagaaaaagagcatcacgatagacttttaatgcttgat
cgtgaagagatgttaagagttactgccttgttagctagtaatgaacttcaaagtgagcta
gaagtaggtaaaactacatataaaaaaggtcaaaagatcaaaaaagaagatctagccaat
ataaatagatttaccttaaattcatatgtaaaaaacttcaataaagatgtgcaaaaaagc
tatgaggatatgaaggcttattttcaaaatgagaagaaaaagctaaaagatgaacatgat
gctaagcttgaaattttagaaaaagatgatattttaccaagtggtgtagtgaagcttgtg
aaggtgtatgtggctactaaacgaaagttaaaagtcggagataaaatggcgggtcgccat
ggtaataagggtattgtatcaaatatcgtccctgatgtggatatgccatatttgccagat
ggtagatcggttgatattgtattaaatccactaggcgttcctagccgtatgaatatcggt
caaattttagaaagccatctaggtcttgtaggtatgagacttggtgagcaaattcaagag
atttttgatagaaaatcaaaagagtggattaaagagttaagatctaaaatgattgagata
gctagcgtatcaagactaatggacgctaaagctatgttagaaaaaattgatgatgataag
ctaattgagtatgcaagggattgggctagtggtgtaaggtttgctactccgatatttgaa
ggggttaagccagaagaatttaataagctatttgagatggcaaaaatcgatatggatggc
aaaacagagctatatgatggtagaactggatctaagatggctgagcgtgtaaatgtcggt
tgtatgtatatgctaaaacttcatcacttagttgatgaaaaagtccatgctagaagcacg
ggaccatatagtttagtgacacagcaaccagtcggcggtaaagccttaagcggtggtcag
agatttggagagatggaagtttgggctttagaggcttatggtgctgctcatactctaaga
gagatgctaactgtcaaatctgatgatgttgagggtagatggttagcttataaggcatta
accaaaggagaaaatgtcccaagtactggtattccagagacattttttgttttaacaaat
gagctaaaatctctagcgttagatgttgaaatttacgatgaggatagtaataatgagtga

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