Campylobacter porcelli: CSUIS_1486
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Entry
CSUIS_1486 CDS
T05900
Symbol
recJ
Name
(GenBank) single-stranded DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
camy
Campylobacter porcelli
Pathway
camy03410
Base excision repair
camy03430
Mismatch repair
camy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
camy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CSUIS_1486 (recJ)
03430 Mismatch repair
CSUIS_1486 (recJ)
03440 Homologous recombination
CSUIS_1486 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
camy03400
]
CSUIS_1486 (recJ)
DNA repair and recombination proteins [BR:
camy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CSUIS_1486 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CSUIS_1486 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CSUIS_1486 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ARR01273
UniProt:
A0A1X9SYJ1
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All DBs
Position
1463502..1465088
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AA seq
528 aa
AA seq
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MLDKEAIKELLSSRFSNDIHTKLSQIPLPCELKDTFKAAKRIKEAIQNDELIAVVGDYDV
DGIVSTAIMDEFLSDMSANYTIKIPNRFKDGYGLNEEIIKELDNTTLIITVDNGISAIEA
AKICKQKGIDLIITDHHMPLPTLPDAYAIINPKQETCPFPNIEICGAQVAWYLIGALKDV
CNLKSYDMAKFLDLLTLAIIADMMELRDLNRILVRLGLVRINSSKRACFEAIKNYYNKDK
FEFDDIGFLIAPLINSAGRMDDATISFKFLRSKSLGEANEYLDIISRFNASRKEQEKALF
ESSQNEINENEDIIVTWGDEWHEGVIGIVAGRLAKKYKKPAIVFSIDGNKAKGSARSVGK
FDILSLIASQESLLCGYGGHKGAAGLVIESANLSKFKTAINQSCFLQELYDFSVNDEILG
EIDPAAIDYELLEILEFFEPYGQKNPRPLFELKKAMVKSAKKIGKDETHLKIILQKNNKT
LEAIFFNYDYLPKNGENIDILVTISKNSFRGLITPQLLIKEIIKQEQK
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgctagataaagaagctattaaggagttattaagcagtcgttttagcaacgatatccat
actaaattatctcaaattccattgccttgtgaattaaaagatacattcaaagcagccaaa
aggataaaagaggcgatacaaaatgatgagctaatcgcagttgtgggggattatgatgta
gatgggattgtaagcacggctattatggatgaatttttaagcgatatgtcagcaaactac
acgataaaaattccaaatagatttaaagatggttatggcttaaatgaggagattatcaaa
gaactagataacaccactttaatcattaccgttgataatggtataagtgctatagaagca
gcaaaaatctgtaagcaaaagggcattgatctaatcatcacagatcatcatatgccactt
cctacacttccagatgcatacgctataataaatccaaagcaagagacctgccccttccca
aatatcgaaatttgcggtgctcaggtggcttggtatttgattggagctttaaaagatgta
tgtaatctaaaaagctatgatatggctaaatttcttgatcttttaaccttagcaattatc
gctgatatgatggaattaagggatttaaatagaattttagtccgccttgggctggtgcgt
ataaactctagcaaaagagcctgttttgaagcgatcaaaaactactataataaggataaa
tttgaatttgatgatattggatttttgatagctccgcttataaattccgctggtagaatg
gacgatgctaccatatcatttaaatttttaaggtctaaaagcttgggcgaggcaaatgag
tatttagatatcattagcagatttaacgcctcacgcaaagagcaagaaaaagcactattt
gaatctagccaaaatgagataaatgaaaatgaggatattatcgttacttggggcgatgag
tggcatgagggcgtaatagggattgtcgctggaagattagctaaaaagtataaaaaacca
gccattgtctttagcatagatggcaacaaagccaaagggagcgctagaagtgttggcaaa
tttgatattttatctctaattgcctctcaagagagcctattatgcggatatggcggacat
aaaggggcagctgggctagttatagagagtgctaatttaagcaaatttaaaacagccata
aatcaatcttgctttttacaagaactatatgattttagcgtaaatgatgagattttaggc
gagattgacccagcagcgattgattatgagcttttagagattttggagtttttcgaacca
tatggtcaaaaaaatccacgcccactctttgaacttaaaaaagccatggtaaaatcagct
aaaaaaataggcaaagatgaaacgcacctaaaaatcatcttacaaaaaaacaataaaacc
ctagaagcgatatttttcaactacgattatttaccaaaaaatggcgaaaatatagatatt
ttagttacaatttctaaaaattcattccgtgggctaatcaccccacaactactaataaaa
gagattataaaacaggagcaaaaatga
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