Campylobacter vicugnae: CVIC12175_0278
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Entry
CVIC12175_0278 CDS
T05727
Symbol
rho
Name
(GenBank) transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
camz
Campylobacter vicugnae
Pathway
camz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
camz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CVIC12175_0278 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
camz03021
]
CVIC12175_0278 (rho)
03019 Messenger RNA biogenesis [BR:
camz03019
]
CVIC12175_0278 (rho)
Transcription machinery [BR:
camz03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CVIC12175_0278 (rho)
Messenger RNA biogenesis [BR:
camz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CVIC12175_0278 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
AAA_25
ATPase_2
Ploopntkinase3
AAA
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
ARR03427
UniProt:
A0A1X9SZP9
LinkDB
All DBs
Position
265463..266782
Genome browser
AA seq
439 aa
AA seq
DB search
MESKETAQQTKKQHTRTHTPVDGYKIEELRLQDLDSLVAIAEEVGVQNPREFRRQELVFE
ILKAQTKQGGFILFTGILEIVEGGYGFLRSTDANLSDSANDTYVSLSQIKKFALRVGDII
TGQVREPREQEKYYALLKIEAINYKSIAEAKERPLFDNLTPLFPNQKIQLEYDPMKLTGR
VLDLFTPIGKGQRGLIVAPPRTGKTELMKELAHGITRNHPEVELIVLLIDERPEEVTDMQ
RSVRGEVFSSTFDLPASNHVRVAELVIEKAKRLVEMGKDVVILLDSITRLARAYNTVTPS
SGKVLSGGVDANALHKPKRFFGAARNIENGGSLTIVATALIDTGSRMDDVIFEEFKGTGN
SEIILDRTISDRRIYPAVNILKSGTRKDELLQGSDDLGKIWAIRNIIATMDDIEALKFLY
SKMLKTKNNKELLSIMNEG
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtaaggaaactgctcaacagactaaaaaacagcacacacgcactcatacgcca
gttgatggttataaaatagaagagcttagacttcaagatttagatagcttagttgccatc
gctgaagaggtcggggtacaaaatcctagagaatttcgtcgtcaagagcttgtatttgag
attttaaaagctcaaactaagcaaggcgggtttatcttatttactggaattttggagatt
gtagagggtggttatggatttttaagatccactgatgccaacctaagcgactcagcaaat
gatacttatgtaagtttaagccagattaaaaaatttgctctaagagttggtgatattatc
acaggtcaagtacgagaaccaagggagcaagagaagtattatgctcttttaaaaatagag
gcaatcaattataaatctatagccgaagcaaaagaaagaccgctatttgataatttaact
ccactatttccaaatcaaaaaattcaactagaatatgatccgatgaagcttactggtagg
gtacttgatctatttactccaattggtaagggtcagcgtggcttgattgttgctccacct
cgcactggtaaaactgagctaatgaaagagttagctcacggtattacaagaaatcatcca
gaagttgagctaatagtcttgttaattgatgagcgtcccgaagaggttactgatatgcag
cgcagcgtacgcggagaggtatttagctctacatttgatctgcctgcttcaaaccatgta
agggtagctgagttagttatagaaaaagctaaaagattagtagaaatgggtaaagatgtt
gttatcttgcttgatagtattactcgtcttgcaagagcctataatacagtaactccaagt
agtggtaaggtattaagtggtggcgttgatgcaaatgccttacataagccaaagagattt
tttggtgcagctagaaatatagaaaatggtggaagtttaaccatagtagctactgctctt
atagatactggttcgcgtatggatgatgtgatatttgaagagtttaaaggtactggaaat
agcgagattatcctagatcgtactatctcagatcgtagaatttatccagctgttaatatc
ttaaaatcaggcacaagaaaagatgagcttttacaaggcagtgatgatctgggcaaaatt
tgggcgatacgcaatattatagctacaatggatgatattgaggctcttaaattcttatac
tcaaaaatgttaaaaacaaaaaacaataaagagcttctaagtataatgaacgagggctaa
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