Campylobacter vicugnae: CVIC12175_0790
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Entry
CVIC12175_0790 CDS
T05727
Name
(GenBank) UvrD/REP family helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
camz
Campylobacter vicugnae
Pathway
camz03420
Nucleotide excision repair
camz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
camz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CVIC12175_0790
03430 Mismatch repair
CVIC12175_0790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
camz03400
]
CVIC12175_0790
Enzymes [BR:
camz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CVIC12175_0790
DNA repair and recombination proteins [BR:
camz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CVIC12175_0790
MMR (mismatch excision repair)
Other MMR factors
CVIC12175_0790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
eIF3_p135
CarD_TRCF_RID
PDCD9
DUF7295
Nop5_N
Motif
Other DBs
NCBI-ProteinID:
ARR03919
LinkDB
All DBs
Position
complement(756993..759041)
Genome browser
AA seq
682 aa
AA seq
DB search
MNNLLNSLNENQKIAATHIDGPMLILAGAGSGKTKTITSRLAYLISQVGIDPLNTLTLTF
TNKAASTMKQRAMAMLGNYNANPLLCTFHKFGLLFLKFHINELGRSNNFIIIDTDDKKKI
IKEIESEVQTAIVANEISKYKNMLLSVEAVMDSSKLDTQYSKTNYEKIAKAYKLYEEYLK
SNNLVDFDDLLCLTYNILANNPTLSSQISDRYKYIMVDEYQDTNDLQYKLLRQLCYNHQN
LVVVGDDDQSIYGWRGARIENILNFKDQFNDVKLIKLETNYRSTPSILKAANELIDHNRS
RLGKSLVSQLLDENPIEILEHSDENAEAKNIATKINKLLASGVSASQIAILYRVNALSRS
LEDGLNKARIPYKMVGGVKFYERAEIKDVISYLRLILNPNDDFSLTRIINRPKRGLGKVS
LAKLEKFAFDNKASLYNAIYMASEDVLSKKLSQTLIQLADSIKELSTLAPYDLISKFDST
FGIKAYYESLPDGAERVINIDEFYALLKDHILNTPEFDLEEFLNELALESEQDRISDDAI
SIMSVHASKGLEFEHLFVIGLEEGFFPLLGDGSDIEEERRLAYVAITRAKKGLNLSYSNS
RFYKGQRTKLNRSRFLSEAGLCEGSLKIESQNEFKKGDLIKHKIFGIGRVIEVTKIKNEF
KLKINFGGNIKDIMSSFVEKVI
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatttattaaattcacttaatgaaaatcaaaagatagccgccactcatatagat
ggtccaatgctaatcctagctggggctggaagcggcaagacaaaaactataacctcgcgt
ctagcttatttaataagccaagtaggcatagatccactaaacactctaacacttactttt
actaataaagcagcctctactatgaagcagcgtgctatggctatgcttggcaattataat
gctaatcctttgctttgcacatttcataaatttggcttattgtttttgaaatttcatatt
aatgaactaggtagaagtaataactttataataatcgatactgatgataaaaaaaagatt
ataaaagagatagaaagtgaagtccaaacagctatagtagcaaatgagatctcaaaatat
aaaaatatgcttttgagtgtagaggctgtgatggatagctcaaaactagatactcaatac
tcaaaaacaaattatgaaaaaattgctaaagcctataagctatatgaggagtatctaaag
agtaataatttagttgattttgatgatcttttatgcttgacatataatattttagctaat
aatcctactttaagtagtcaaatttcagatagatataaatatataatggttgatgagtat
caagatactaatgatttacaatacaagttacttcgccaactatgctataatcatcaaaac
ttagtagtagtaggagatgatgaccaaagtatctatggctggagaggtgcaaggatagaa
aatatattaaatttcaaagatcaatttaatgatgttaaattgattaaattagagactaac
tatcgctctactccttcaatcttaaaagcagccaatgagctaatagatcacaacagatca
aggctaggcaaaagcttagtaagtcagttgctagatgagaatcctatagagattttagag
catagcgatgaaaatgcagaagctaaaaacattgctacaaaaataaataaacttcttgca
agtggagtatcagcaagtcaaattgcaattttatatagagtaaatgcgctctcaagaagc
ttagaagatggattaaataaggctagaattccatataaaatggttggcggggtcaaattc
tacgaaagagctgagataaaagatgttataagctatctaaggctgattttaaatccaaat
gatgatttttcactcactcgcattattaatcgtccaaaacgaggcctaggcaaggtaagt
ttagctaaactagaaaaatttgcttttgataacaaagcttcgctatacaatgcaatatat
atggctagtgaagatgtattaagcaaaaagctaagccaaacattaatccagctagcagat
agcatcaaagagctttctactttagctccatatgatttaataagcaaatttgattctaca
tttgggattaaggcatattatgagagtttgccagatggtgctgaaagagtaattaatata
gatgagttttatgctttattaaaagatcatatattaaatactcctgaatttgatttagag
gagtttttaaacgagcttgcacttgagagcgaacaagatagaattagtgatgatgctata
tctattatgagcgttcatgctagcaagggacttgagtttgaacatctttttgttattggg
cttgaggagggattttttccattgcttggcgatggaagcgatatagaagaagaaagacgc
ctagcatatgtagctattacaagggctaaaaaaggattaaatttatcatactcaaattca
agattttataaaggtcaaagaaccaagttaaatagatcaagatttttaagcgaagctgga
ttgtgtgaaggttcgcttaaaattgaaagccaaaatgagtttaaaaaaggggatttaatc
aagcataaaatatttggcataggacgcgtaatagaagtaacaaagattaaaaatgaattt
aaattaaaaataaattttggtggaaatataaaagatataatgtcatcatttgtagagaaa
gttatatga
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