Campylobacter vicugnae: CVIC12175_0919
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Entry
CVIC12175_0919 CDS
T05727
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase I
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
camz
Campylobacter vicugnae
Brite
KEGG Orthology (KO) [BR:
camz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
camz03016
]
CVIC12175_0919 (truA)
Enzymes [BR:
camz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CVIC12175_0919 (truA)
Transfer RNA biogenesis [BR:
camz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CVIC12175_0919 (truA)
Prokaryotic type
CVIC12175_0919 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ARR04046
LinkDB
All DBs
Position
881627..882388
Genome browser
AA seq
253 aa
AA seq
DB search
MKIALKYSYDGSKFSGSQTQPNVQAVEDAINEALNHVGIYEPVLSGSRTDKGVHALNQIS
TVHCGDFWNLNRLKDQISRHLNPYINLKDIWIVDQDFHPRFSAVAREYRYIIYHGDKSPF
LSDFVYFYPNLDLKRLNLALACFIGKQDFKPYYKVGSGEKSTIREIYKAYAYQIQKSAFS
INRYSDKPNLTIIKFRANGFLRAQVRLMVANSIKAATSDEKLEEFIEFHKAQKPLTKMPA
PPNGLYLKKVFFK
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgctctaaaatatagctatgatggatctaaatttagcggttctcaaactcaa
ccaaatgtccaagccgtagaagatgctataaatgaagcattaaatcatgtaggaatttat
gaaccagtactatcaggctctagaaccgataaaggcgttcatgcattaaaccaaatatca
accgtacattgcggtgatttttggaatttaaatagattaaaagatcaaattagccgtcat
cttaacccatatattaatcttaaggatatatggattgtagatcaagattttcatcctaga
tttagtgcagtagctagagagtatagatatataatctatcacggtgataaatcaccattt
ttgagtgattttgtatatttttatccaaatttagacctaaaaaggttaaatttagcactt
gcttgctttattggtaagcaagattttaaaccatattataaggttggaagtggtgaaaaa
tcaactattagagagatttataaagcctatgcatatcagattcaaaaatctgcatttagt
ataaataggtatagtgataagccaaatttaactattattaaatttagagccaatggcttt
ttaagagctcaagttaggctaatggttgcaaactctataaaagctgcaactagcgatgaa
aagctagaggagtttatagagtttcacaaagctcaaaaaccattaactaaaatgccagcc
ccaccaaatggattatatttaaaaaaggtgttttttaagtag
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