Campylobacter vicugnae: CVIC12175_1166
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Entry
CVIC12175_1166 CDS
T05727
Symbol
uvrB
Name
(GenBank) UvrABC nucleotide excision repair complex, subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
camz
Campylobacter vicugnae
Pathway
camz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
camz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CVIC12175_1166 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
camz03400
]
CVIC12175_1166 (uvrB)
DNA repair and recombination proteins [BR:
camz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CVIC12175_1166 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CVIC12175_1166 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
Kinesin
UB2H
SWI2_SNF2
HAAS
AAA_22
Microtub_bd
MG185_MG260
PIF1
AAA_7
DUF87
Motif
Other DBs
NCBI-ProteinID:
ARR04277
LinkDB
All DBs
Position
complement(1128940..1130916)
Genome browser
AA seq
658 aa
AA seq
DB search
MDKFDLNSKFTPSKDQQNAIDNIVNAFNNGAKYSVLLGVTGSGKTFTMANVIKQLNIPTL
IMTHNKSLAAQLYSEFKGFFPNNHVEYFISYYDYYQPEAYIPRQDLFIEKDSAINDELER
LRLSATANLLEHDDTIVIASVSANYGLGNPAEYKGMIITLERGMQISQKELLLKLVDMGY
KRNDSYFDRADFRVNGDVIDIYPAYFNDEAIRLEFFGDEIEEIYHFNALENKKTKNLNRF
ILYATSQFVVGENRLKEAIKGIEAELEDRLKFYESQGRLVEYQRLKQRVEFDLEMLATTG
STKGVENYARYLTGQKPGETPYSMFDYFEMSGQDYLIIVDESHVSLPQFRGMYAGDRSRK
EILVEYGFRLPSALDNRPLKFDEFIAKKGKFLFVSATPNEYEIQLANNHIYEQILRPTGL
LDPEIEVISSDNQVEVLYDRAKAVIERGERVLITTLTKKMAEELTRYYLELGLKIKYMHS
DIDAVERNELIRGLRRGDYDILVGINLLREGLDLPEVSLVAVMDADKEGFLRSKTSLIQT
MGRAARNVNGKVILFANKITNSMQQAIDITTARRKYQDEYNKANGIIPKSASRNIEDSLK
EEEAPALYTKAKKLEKMPANERAKMVKELRAMMLEAAKNLEFEKAATLRDEIAKLRQI
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggacaaattcgatttaaatagtaaatttacaccaagcaaagatcagcaaaatgctatt
gataatattgtaaatgcttttaataatggagcaaaatatagcgttcttttgggggttaca
ggtagtggtaaaacttttactatggcaaatgtaataaagcagttaaatatcccaacgcta
ataatgacacacaataaatctttagcagcgcaattatatagtgaatttaaaggatttttt
cctaataatcatgtggagtattttattagctattatgattattatcagcctgaggcatat
atcccaagacaagatttatttatagaaaaagatagcgctataaatgatgaattagagcgc
ctaaggctctcagctacggcaaatttgcttgaacacgatgatactatcgtgatagctagt
gtatcagcaaattatggtctaggtaatccagctgagtataagggtatgattattacttta
gagcgtggtatgcaaattagccaaaaagagctacttttaaagctagttgatatggggtat
aaaagaaatgatagctactttgatagggctgattttagagttaatggagatgtgatagat
atctatccggcttactttaatgatgaggcgataaggcttgagttttttggtgatgagata
gaagaaatttatcactttaacgcactagagaataaaaaaactaaaaatttaaatcgcttt
atactatatgcaacaagtcagtttgtagtgggcgaaaatagacttaaagaggcgataaag
ggaattgaggctgaattagaagataggcttaaattttatgagagtcaaggaagattagta
gagtatcaaaggctaaaacaaagggtggaatttgatctagaaatgctagctaccactgga
agtacaaagggcgtggagaattatgcaagatatctaacaggtcaaaagccaggagaaacg
ccatactcgatgtttgattattttgagatgagtgggcaggattatctaattatagttgat
gagagtcatgtgagtttgccacagtttcgtggaatgtatgcaggtgatagaagtagaaaa
gagatcttagtagagtatggatttagattgcctagtgcgttagataatagaccgcttaaa
tttgatgagtttatagctaaaaaggggaaatttctatttgtatctgctactccaaatgag
tatgaaattcagctagcaaacaatcatatatatgagcaaattttacgcccaactgggctt
ttagaccctgagatagaggtgataagtagtgataatcaagttgaagttctttatgataga
gcaaaagctgtaatagagcgaggcgagagagtgctaataactactttaactaaaaagatg
gctgaagaattaacaagatactatctagaactaggattaaaaattaaatatatgcactct
gatattgatgctgtggagcgaaatgagctaatacgcggcctaaggcgcggggattatgat
attttagttgggataaatttgcttcgtgaggggctagatttacctgaggtgagtctagtg
gcagtaatggacgcagataaggaggggtttttgcgttctaaaactagtcttattcaaact
atggggcgtgcagctagaaatgtaaatggtaaagttatactatttgctaataaaataact
aactcaatgcaacaagccatagatattacaacggctcgccgtaagtatcaagatgagtat
aataaagcaaatggaataatcccaaaaagtgctagcagaaacatagaagatagcctaaaa
gaagaggaggctccagcactatacaccaaagctaaaaaacttgaaaaaatgccagctaat
gagcgcgctaagatggtaaaagagctaagggctatgatgctagaagcggctaaaaatctt
gagtttgaaaaggcagctactcttcgtgatgagattgctaagctaagacaaatttaa
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integrated database retrieval system
