Cyanobacterium aponinum: Cyan10605_0041
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Entry
Cyan10605_0041 CDS
T02376
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
can
Cyanobacterium aponinum
Pathway
can03420
Nucleotide excision repair
can03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
can00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Cyan10605_0041
03430 Mismatch repair
Cyan10605_0041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
can03400
]
Cyan10605_0041
Enzymes [BR:
can01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cyan10605_0041
DNA repair and recombination proteins [BR:
can03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cyan10605_0041
MMR (mismatch excision repair)
Other MMR factors
Cyan10605_0041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
Ter
Dredd_2nd
Motif
Other DBs
NCBI-ProteinID:
AFZ52202
UniProt:
K9Z0G6
LinkDB
All DBs
Position
complement(47284..49485)
Genome browser
AA seq
733 aa
AA seq
DB search
MNNHRRIEETIAQFRQKLRPGQIELSQWQGGKMAVSAVPGSGKSFSLAVAGAILVCQEKL
NPNRYLLIVTYTRSAAASIKDKMRTILTEEFKMPPVGFMVQTIHALASSIVNRYPFLSGL
NLETSNLVDVSSNHPLILETVENWMSLHSPAFDALLRGENEKSFNYEESEVLRRESVLRT
EVLPKFTHTVISTLKSSGWNIDNLDNLANLDNSGIYPLGTVASELYQEYQKLIHKYQVID
YDDLIIGALNVLNNEDARQTLQQEIAGVFEDEAQDSTPLQGDLISILAQDKDCSEPNLVR
VGDPNQAINSTYTASDPFYFHQFCEDCRQKNRLFLMEQAGRSNENIINYANETLAWMAEK
VEANLIEKQEIKIVGENDSQPDSNPLAEGKGVEFYEPETFEQVLDLMSERIIHLFDKKEQ
EINTNCAILVRANKQGSFIFQELQKRLSAYDIPLKLIGDRISYSDIVKDILGVLQFIAFP
HSSKFVYNILKILAQQEIISNQDFDQLSIYPEKFLYPTPLDDALTPEQEKARKFCLKFLQ
ASIELSSYQLIPFICSVLNYDQLALATAQKLCDRIQKENQGKMSLKAMIETLTNINNTER
FEGVETENEDIYTKKGQITIMTMHKSKGLEWDYVFLPFYDKENIFSEKKINGSLKFLGKC
DLNDIIRTQLRQEIHQQRLGKKIEPLSLHQAHEKAIQEKQAEELRLLYVAITRAKKLLWM
SKSKDNFQNWRYS
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaccataggagaatagaagaaacaatcgcccaattcagacaaaaactgcgtccg
ggtcaaatagaattaagtcaatggcagggtggcaaaatggcagtctctgctgtgccgggt
tcaggaaaatctttttcgttagccgttgccggtgcaatattggtttgtcaagaaaaacta
aatccgaatcgctatctattaatcgtaacttatactcgttccgccgccgctagtattaaa
gacaaaatgaggacgattttaactgaagaatttaagatgcctcctgtgggttttatggta
caaacaattcatgctttagcgtcaagtattgtcaatcgttatccttttttgtcgggatta
aatttagaaaccagtaatttagtcgatgtgtctagcaatcatcccttaatcctagaaacg
gtggaaaattggatgtctcttcattctcctgcttttgatgccttgttaaggggggaaaat
gaaaagtcatttaattatgaagaaagcgaagttttgcgtagagaatcggtactgcgtacg
gaagttttacccaaatttactcatactgtcattagtacccttaaaagttctggttggaat
attgataaccttgacaatctagcaaatttagataattccggtatttatcctttaggcacg
gtagcctctgaactatatcaagaatatcaaaaactaattcataaatatcaggtaatagac
tatgatgacttaattattggggcattaaacgttctgaataatgaagatgcaagacaaaca
ctacaacaagaaattgcaggagtatttgaagatgaagcccaagactctacaccgttgcag
ggtgatttaatcagtatcttagcccaagataaggattgtagcgaacctaatttagtgagg
gtgggggaccccaatcaagcaattaattccacttataccgcttcagaccccttttatttt
catcaattttgtgaggattgtcgccaaaaaaatcgattatttttaatggaacaagcagga
agaagtaatgaaaatattattaactatgctaatgaaactttggcttggatggcggaaaag
gtagaagcaaatttaattgaaaaacaggagataaaaattgttggagaaaatgattctcaa
ccagactctaatcctttggcagaggggaaaggggtagaattttatgaacctgaaaccttt
gagcaagttttagatttaatgagtgaaagaatcattcatttatttgacaaaaaagaacaa
gaaattaatactaattgtgccattttagtcagagctaataagcagggaagttttattttt
caagaattacaaaaaagattatctgcctatgatattcccttaaaactaataggcgatcgc
atctcttacagtgatatagtgaaagatatactaggagttttacagtttattgcttttcct
cattcttccaaatttgtctataatattttgaaaattttggcacaacaggaaattattagt
aaccaagattttgatcaattaagtatctatcctgaaaaatttttatatccaacaccttta
gatgatgccctaactcctgagcaggaaaaagctcgaaaattttgcctcaaatttctccaa
gccagtattgaattatcttcctatcaactaattccttttatttgctctgttttaaattat
gatcaattagcccttgctactgctcaaaaattgtgcgatcgcatccaaaaagaaaatcaa
ggaaaaatgtccttaaaagcaatgatagagacattaactaatattaataatacagaaagg
tttgaaggagtagaaacagagaatgaagatatttatacaaaaaaaggtcaaattaccatt
atgaccatgcacaaatctaaaggtttagaatgggattatgtctttttaccgttttatgac
aaagaaaatattttctcagaaaaaaaaattaacggaagtcttaaatttttgggcaaatgt
gacttaaatgatattattcgcacacaactaagacaagaaatccatcaacaaagattaggt
aaaaaaatagaacccttatcccttcatcaagcccatgaaaaagccatccaagaaaaacaa
gcagaagaattaagattactatatgtagccataactagagccaaaaaactattatggatg
agtaaatcaaaagataacttccaaaattggcgttattcttga
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