Cyanobacterium aponinum: Cyan10605_0232
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Entry
Cyan10605_0232 CDS
T02376
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
can
Cyanobacterium aponinum
Pathway
can03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
can00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Cyan10605_0232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
can03400
]
Cyan10605_0232
Enzymes [BR:
can01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Cyan10605_0232
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Cyan10605_0232
DNA repair and recombination proteins [BR:
can03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Cyan10605_0232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AFZ52386
UniProt:
K9YZK9
LinkDB
All DBs
Position
complement(291935..292768)
Genome browser
AA seq
277 aa
AA seq
DB search
MPELPEVETVCRGLNYVTSGLVIMGADVLLSRSVAFPDSDSTFVQEVKSQKILQWHRRGK
YLLAQLSEGYLGVHLRMTGQLLWVKQDSPLQKHTRVRFFFADNQELRFVDTRTFGKVWLV
NQDVAPDSIITGLQKLGYEPFDAQFSVTYFQDKLKRCRRPIKTVLLDQGIVAGIGNIYAD
EALFVSNIHPQTLACDLSSSQIERLHSAILEVLETAIASGGTTFSDFLHITGVNGNYGGK
AWVYGRKGQPCRICSNIIEKIKLGGRSSHFCPQCQKG
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacctgaagtagaaactgtgtgtcggggtctcaattatgtgacctcggga
cttgttattatgggggcagatgtcttgctgtctcgtagtgtggcttttcctgattctgac
tctacatttgtacaggaagttaagtcacaaaagattttacaatggcatcggagaggaaag
tatttattagcccaattatccgaaggttacttaggagtccatttgaggatgacagggcag
ttattatgggttaaacaagattctcctttgcagaaacatacaagggtaagattctttttt
gctgataatcaagagttacgttttgtggatacgaggacttttggcaaggtgtggttagtt
aatcaagatgttgcccccgattctattatcactggtttgcaaaagttgggttatgagcct
tttgacgctcaattttccgttacttattttcaggataaattaaaacggtgtcgtcgcccg
attaaaacggtgcttttagatcaaggtattgtagcgggtattggtaatatttatgctgat
gaggcgttatttgtcagtaatattcatcctcaaacccttgcctgtgatttgtcttcatcc
caaatagaaaggttacactctgctattttggaggtgttagaaactgcgatcgcatctggg
ggaacaacatttagtgattttctccacattactggggttaacggtaactatggcggaaaa
gcatgggtttatggtcgtaaagggcaaccctgccgtatatgttctaatataatcgaaaaa
ataaaattaggagggcgatcgagtcatttttgccctcaatgtcaaaagggataa
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