Cyanobacterium aponinum: Cyan10605_1234
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Entry
Cyan10605_1234 CDS
T02376
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
can
Cyanobacterium aponinum
Pathway
can03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
can00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Cyan10605_1234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
can03400
]
Cyan10605_1234
DNA repair and recombination proteins [BR:
can03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cyan10605_1234
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Cyan10605_1234
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
RsgA_GTPase
AAA_29
AAA_16
AAA_21
nSTAND1
AAA_23
nSTAND3
AAA_22
AAA_18
AAA_33
NACHT
Say1_Mug180
DnaJ_CXXCXGXG
Viral_helicase1
ATPase
MeaB
cobW
DUF8260
HHV_U21
DUF3788
Motif
Other DBs
NCBI-ProteinID:
AFZ53353
UniProt:
K9Z4M9
LinkDB
All DBs
Position
1489188..1492076
Genome browser
AA seq
962 aa
AA seq
DB search
MSSKIVIRGARQHNLKNIDLELPRNKLIVFTGVSGSGKSSLAFDTIFAEGQRRYVESLSA
YARQFLGQLDKPDVDSIEGLSPAISIDQKSTSHNPRSTVGTVTEIYDYLRLLYGRAGVPH
CPHCGHSIAPETIDQMCDRILSLPEKTKIHLLAPVVRGKKGNHHQLLSSLRSQGFVRVKI
NGEIRELGDNIELKPQSKHNISVVVDRLVVKASIQERLADSLSTCLKLAEGIAIVEILDK
GNAQNTIDNFNIAENDPSQSPLIRGEFSESDLIRGEFPDEIVFSENFACPTHGAVMEELS
PRLFSFNSPYGACSHCHGLGSLRQFSPDLVIPDPNAPVKDAIAPWAEKDNPYYASLLEYL
AKEYKFKLTQSWSSLTEKQQHIILYGDQEILQVQYGYYRGVIPMLEKTYQETNSDLIKQK
LEQYLEYQTCEVCHGKRLKPEALAVKLGQYSIYDLTSVSIAEALQRIDKIQLTPKQAQIG
ELALKEIKDRLKFLLDVGLDYLSLDRTAMTLSGGEAQRIRLATQIGSGLTGVLYVLDEPS
IGLHQRDNDRLLATLKKLRDLQNTLIIVEHDEDTIKSADHIVDIGPKAGIHGGDIVCQGN
LKQLVNSKESLTGAYLSGRRKIEIPSTRREGNGKSLILKNCHRNNLKNIDVEIPLGKFVC
VTGVSGSGKSTLVNELLYPSLQHYLSRRVPFPKQLDSLEGIEAVDKVIVIDQSPIGRTPR
SNPATYTGVFDVIRELFAQTIEAKARGYKAGRFSFNVKGGRCEACGGQGVNVISMNFLPD
VYVQCDVCKGARYNRETLQVKYKGNSIADVLNMTVEEALKVFENIPRAVNRLQTLVDVGL
TYVKLGQSAPTLSGGEAQRVKLATELSRRATGKTIYLIDEPTTGLSFYDVHHLLNVLQKL
ADKGNSIIVIEHNLDVIKCADWIIDLGLEGGDKGGEIVAIGIPEDIAKSKKSYLAKYLKK
LL
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcaaaaatagttattcgtggcgcaaggcaacataatcttaaaaatattgattta
gaattaccccgcaataagttaatcgtattcactggggtatctggtagtggcaaatcatcc
cttgcttttgataccatttttgcagaaggacaacgcagatatgttgagtcactcagtgcc
tatgctcgtcaatttctaggacaattagataaacccgatgtggatagtattgaaggctta
tcccctgctatttccattgatcaaaaatccacttcccataatcctcgctcaacggtaggc
acagttacggaaatttatgactatctacggttactctatggtagagcaggagtacctcat
tgcccccattgtggtcattctatcgctcctgaaaccattgaccaaatgtgcgatcgcatc
ttaagtttacctgagaagacaaagatacatctattagcccctgttgtcagaggaaagaaa
gggaatcatcaccaattattatctagtttacgctctcagggcttcgtgagggtgaaaatc
aatggagaaattagggaattaggagataatatcgagttaaagccccaatcaaagcataat
atcagtgttgtggttgaccgtctcgtagttaaggctagtattcaagaaagactcgctgat
tctctttctacttgtttgaagttagcggaaggaattgccatagtcgagattttggacaaa
ggaaatgcccagaataccattgataacttcaatatagcagaaaatgatccctcccagtcc
cctttaataaggggggagttttcggagagtgacttaataagaggagaatttcctgatgag
attgttttttcagaaaactttgcttgtcctactcatggagcggtaatggaggagttatct
ccccgtcttttttcctttaattctccctatggtgcttgtagtcattgtcatggtttgggt
agtttaaggcagttttctcctgatttagtcataccagatcccaatgctcctgtcaaagat
gccattgcaccttgggcggaaaaagataatccctattatgcgtctctattggaatactta
gcaaaggaatataagtttaaactgactcaatcttggtcaagtttaacagaaaagcaacag
catatcattctctatggtgatcaagaaattttacaggtacaatatggctactatcgggga
gttattcccatgctcgaaaaaacctatcaggaaaccaactcagatttaattaaacaaaaa
ttagagcagtatttagagtatcaaacctgtgaagtgtgtcacggtaaaagacttaaaccc
gaagcccttgccgttaaattaggacaatattccatctatgatttaaccagtgtttctatc
gccgaagccctacaacgtatcgacaagattcaactcactcccaaacaagctcaaatcggc
gaattagccctcaaagaaatcaaagaccgtttaaaatttctccttgacgtaggtttggat
tacctaagtctcgatcgcactgccatgactttatcaggaggagaagcccaacgcatccgt
ttagccactcaaattggttcaggcttaacaggagtattgtatgtattagatgaacctagt
atcggtttgcatcaacgggacaatgatcgcctcttagctaccctgaaaaaattaagagat
cttcagaatacacttataattgtagaacatgatgaggatacgatcaagagtgcagaccac
atcgtcgatattggaccaaaagcaggtattcacggaggagatattgtctgtcaaggcaat
ttaaaacaactagttaacagtaaagaatccctaactggggcgtatttatcgggcagaaga
aagattgaaattccctccactcgcagagaaggtaacggtaaatctcttattttgaaaaac
tgtcatcgtaacaacctcaaaaatattgatgtagagatacctttaggtaaatttgtctgt
gtcacgggggtatctggtagtggtaaatctaccctcgtcaatgagttactctatccctct
ttgcaacattatctcagtcgtcgtgtgccttttcctaaacagttagactccttagaaggc
atcgaagcagtcgataaagttattgtaatcgatcaatctcccattggacgcacacctcga
tcgaatcctgctacttatacaggagtttttgatgtgattcgggaattatttgctcaaacc
atcgaagccaaagcaaggggatataaagcaggaagattctcttttaatgtcaaaggtggt
aggtgtgaagcctgcggtgggcaaggagttaacgttatctctatgaatttcttacctgat
gtttatgtccaatgtgatgtgtgtaaaggtgcaagatataaccgtgaaactctccaagtt
aagtataagggaaattcgatcgccgatgtcttaaatatgaccgtagaggaagccttaaaa
gtatttgagaatattccccgcgcggtaaatcgtttacaaacccttgtggatgtaggctta
acttatgtcaaattagggcagtctgcacccactttatcaggaggagaagcccaacgggta
aaattggcaacggaattatctcgccgcgctacaggtaaaaccatttatttgatcgatgag
ccgactactggtttatcattttatgatgttcaccacttattaaatgtcttgcaaaaattg
gcagacaaaggtaattctatcattgttattgagcataatttagatgtgattaaatgtgcg
gattggattattgatttaggcttggaagggggagataaaggaggggaaatagtcgctatt
gggatacctgaagatattgcaaaatcgaaaaaatcttacctcgcaaaatatcttaaaaaa
ttattgtaa
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