Cyanobacterium aponinum: Cyan10605_1472
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Entry
Cyan10605_1472 CDS
T02376
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
can
Cyanobacterium aponinum
Pathway
can03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
can00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Cyan10605_1472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
can03019
]
Cyan10605_1472
03400 DNA repair and recombination proteins [BR:
can03400
]
Cyan10605_1472
Enzymes [BR:
can01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cyan10605_1472
Messenger RNA biogenesis [BR:
can03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Cyan10605_1472
DNA repair and recombination proteins [BR:
can03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Cyan10605_1472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Cmr1_like_C
Motif
Other DBs
NCBI-ProteinID:
AFZ53583
UniProt:
K9Z596
LinkDB
All DBs
Position
1763765..1765249
Genome browser
AA seq
494 aa
AA seq
DB search
MNNSLQFLKYNLKKYWGYDNFRYPQKEIINSILSGKDCLVVMPTGGGKSLCFQLPALLQK
GLTIVISPLVALMENQVLELRQKNLPASILHSEMKKRDRTFTLNLLENQKLRLLYLSPET
LLSPPIWKIISHPNLIINALILDEAHCLSQWGDSFRPTYLRLGAIRSSLIKSKLNSSQMA
MKKESMILPIAAFTATADNNTQKIIQEYLQLSNPKKFLISPYRDNLRIKIKTIWTPRSRK
KQLINHIKNKNKQSGLIYVRTRKDSENISHLLNELGYQNKAYHGGLEASIRRNIEQDWLE
EKIKFVVCTSAFGMGINKPNLRWIFHYQTPLFLSEYIQEIGRGGRDGKLAEAITLISEKT
GFFNPEDKNIKKYFLQRRIKQYQEALKIIKKLPLQGNIENLSRDKQVYLSILNLSKQLYW
LDPFNYQINLKNPQENIKFLIQKQKKLVRLTEEYMGTKKCRWGFLLDAFGFPQGRDFSCG
KCDNCEVSIHNNFK
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaataattcgttacaattcttaaaatataatctaaaaaaatattggggatatgataat
tttcgttatcctcaaaaggaaattattaactcaattttatcaggtaaagattgcttagta
gtaatgcctacaggtgggggtaagtctctctgttttcagttacctgccctattacaaaaa
ggtttaactatagtgatttcgccccttgtggctttaatggaaaatcaagtattggagttg
cgacagaaaaatttacccgcttctattttacatagtgagatgaaaaagcgcgatcgcacc
tttactttaaacttattagaaaatcagaaattaaggttgctatatctttctccagaaact
ctcctttctccgcctatttggaaaataatttctcatcctaacttgattatcaatgctcta
attttagacgaagcccattgtcttagtcagtggggggatagttttcgcccgacatatcta
cgtttaggtgcaattcgttctagtttaattaaatctaaactaaattcttctcaaatggct
atgaaaaaagaatctatgattttacccatcgccgctttcaccgccacagccgataataat
actcaaaaaattattcaagaatatttgcaattatcgaatcctaaaaaatttttaattagt
ccttatcgagataatttacggataaaaattaaaactatttggactcctagaagtaggaaa
aaacaattaattaaccacataaaaaataaaaataaacaaagtggtttaatttatgtcaga
accagaaaagatagtgaaaatattagtcacttactaaatgaattaggttatcaaaataaa
gcatatcatggcggattagaagcaagtattcgcagaaacattgaacaagattggttagaa
gaaaaaatcaaatttgtggtatgtacatctgcttttggcatgggtattaataaacctaac
ctgcgatggatatttcactatcaaacccccctctttctttctgagtatattcaagaaata
ggtagaggtggtagagacggcaaactagcagaagcaataaccttaattagtgaaaaaacg
ggcttttttaatcccgaagataaaaatataaaaaaatactttctccaaagacgaattaaa
caatatcaagaagcacttaaaataattaaaaaattgccacttcaagggaatatagaaaat
ttatccagagataaacaagtatatctttcaattttaaatcttagtaaacaattatattgg
ttagacccatttaactatcaaattaatctcaaaaatcctcaagaaaatatcaaattttta
attcaaaaacaaaaaaaattagtcagattaaccgaagaatatatgggaacaaaaaaatgt
cgttggggttttctcctcgatgcttttggatttccacaaggtagggattttagttgtggt
aaatgcgataattgtgaagtcagtatccacaataattttaaatag
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