Cyanobacterium aponinum: Cyan10605_2409
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Entry
Cyan10605_2409 CDS
T02376
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
can
Cyanobacterium aponinum
Brite
KEGG Orthology (KO) [BR:
can00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
can03400
]
Cyan10605_2409
DNA repair and recombination proteins [BR:
can03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Cyan10605_2409
Archaeal homologous recombinant proteins
Cyan10605_2409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_15
Rad50_zn_hook
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
DUF5082
ABC_tran
RsgA_GTPase
ATG17_like
Motif
Other DBs
NCBI-ProteinID:
AFZ54491
UniProt:
K9Z5M4
LinkDB
All DBs
Position
2863986..2867009
Genome browser
AA seq
1007 aa
AA seq
DB search
MIPRKLTLKNFLSYRHAELDFTGLHTACICGANGAGKSSLLEAITWVVWGKTRTASDDDL
IHLGERETRVDFEFIYDEQHYRIIRTRQRKNGSTLDFQIINEQGYKSIGGKGLRDTENKI
KECLKIDYDTFTNSAYLRQGRADEFMLRSPSERRKILADLLKLDQYENLANEAKELARDF
KIKAEEISRNLEENKEKLEEKQSFHIAIDETEKELAYFQKKQTVNQEELQTIQLLNNQRS
SLKQRYDWQQNQVQTIAKKIQQLQQEKADLEQEIKKITVTLSQEEDINTNYEQWQKLREE
DEGLNIKFNQYQQFLEKKQTLEQSLQKESNDLILAIQREKTKLENLINQEKELEAIVNKT
SNLEADLEKLNICRQKLSQLDEIQVQANTLLQQKQSLETEINREEAMLLARLKQLENEEN
NIQTKLNQVPQIRQEFFTLETRLKEIENTKNYQKRVQEKGEQRNLLIQRYLDNQSNLENQ
IKKLNEKLETLNQDHAVCPLCERELDDTHLEYVINKTQNEQQQIVSQSSYYEIEIINCKR
ELDNLRKEYAQLNQELALEDSLKQDYARLENQLDSIDDTYNQYELILEEKADLQNKLDTG
NYAQDNQSKLREIIEQINNLNYSQENHALLRKEEANLRRVEFQQSRIKDAQNQLKKLAQQ
KPDLQTNIESLENRLENLRENSPLQLQLRQIEEEIKSLNYDRTYHQNIRKQGQQLQPYQL
LYGDLQQAKKQYPQLSTRQTQIETNLTQYNQEKETGEKELNSLQEQLSSLTDYSQELAKL
EQEASNCQENINRLLTAKGRLEQSLTNLKDRENDVKELENRLQETQKKYRIYQELTFAFG
RRGIQSLMIENILPQLQDEANHILNSLTGSQLSVQFLTQKPKASRSKKSSSQYIDTLEII
ISDAQGTRSYETYSGGEAFRINFAIRLALSRILAQRAGTRLQLLIVDEGFGTQDTDGCNR
LIGALNAIASEFACILTVTHVNQFKEAFQTRIEVYKTQEGSKIKLSS
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgatccctcgtaaattaactctcaaaaatttcttaagctatcgtcatgcagaattagac
tttaccggtttacacacagcctgtatttgtggtgctaatggtgcaggaaaatcatcttta
ctagaagcgataacttgggtagtttggggaaaaactcgcacagcctccgatgatgattta
attcatttgggagaaagagaaacaagggttgattttgaatttatttatgatgaacaacat
tatcgtattattcgcaccagacagagaaagaatggaagcactttagattttcaaattatt
aatgagcaaggctataaatccattggtggaaagggattaagagatacagaaaataagatt
aaagaatgtttaaaaattgattatgatacttttactaattctgcttatttaaggcagggt
agagcagatgagtttatgttaagaagtccgtcagaaagaaggaaaatactagcagattta
ttaaagttagatcaatatgaaaatttagccaatgaagcgaaagaattagctagagatttt
aaaattaaagcggaagaaattagtcgaaatttagaagaaaataaggaaaaattagaagaa
aaacaatcttttcatatagctattgatgaaacagaaaaggaattagcatatttccaaaaa
aaacagactgttaatcaagaagagttacagacaattcagcttcttaataatcagagaagt
agcttaaaacagagatacgattggcaacaaaatcaagttcaaactattgcaaaaaaaatt
cagcagttacaacaggaaaaagcagatttagaacaagaaatcaagaaaattactgttact
ttatctcaagaagaggatattaacactaattatgaacaatggcaaaaattgagagaagaa
gatgagggtttaaatattaagtttaatcaatatcaacaatttctagaaaaaaaacaaact
ttagaacagtccttgcaaaaggaaagtaatgatttaattttagcaattcaaagggaaaaa
acaaagttagaaaatttaattaatcaagaaaaagaattagaggcaatagttaataagaca
tctaacttagaggcagatttagaaaaacttaatatttgtcgtcaaaaactaagtcaatta
gatgaaattcaggtacaagctaatactctgttgcaacaaaaacagtctttagaaacggag
ataaatagagaagaagcgatgttattggctagattaaaacagttagaaaatgaagagaat
aatatacaaactaaattaaatcaagttcctcaaatacgacaagaattttttaccttagaa
acaaggttaaaagaaatagaaaataccaaaaattatcaaaaaagagtacaggaaaaagga
gagcaaagaaatcttttaattcaaagatatttagataatcaaagtaacttagaaaatcaa
attaaaaaactcaatgaaaagttagaaactttaaatcaagatcatgcggtttgcccttta
tgtgagagagaattagatgatactcatttagaatatgtaattaataaaactcaaaatgaa
caacaacaaatagtttcgcaatcatcttattatgaaatagagattatcaattgtaaacga
gaattagacaatttaagaaaagaatacgcccaattaaatcaagaattagccttagaagat
agtcttaaacaagattatgctagactagaaaatcaattagattctatcgatgatacttat
aatcaatatgaattaatattagaagaaaaagcagatttacaaaacaaattagatacaggt
aattacgctcaagataatcaaagcaaattaagagaaattatcgagcaaattaataactta
aactatagtcaagaaaaccatgctttattaagaaaagaagaggcaaatttacgtcgagta
gaatttcagcaaagtagaataaaagatgctcaaaatcaactaaaaaaactagctcaacaa
aagccagatttacaaacaaacatagaatctttagaaaaccgtttagaaaatctcagagaa
aattcccctttacaattacaattacgccaaattgaggaagaaataaaatctttaaattac
gatcgcacttatcatcaaaatattagaaaacaagggcaacaattgcaaccctatcagcta
ctttatggagatttacaacaggctaaaaaacagtatccccagttaagcacaagacaaact
caaattgagactaatttaacccaatataaccaagaaaaagagacgggagaaaaagaatta
aatagtcttcaagaacaactatcatcattaactgattatagtcaggagttagcgaaacta
gaacaagaagcaagtaattgtcaggaaaatatcaatagattactaacagctaaaggaaga
ttagaacaatctttaactaatttaaaagatagagagaatgatgttaaagaattagaaaat
cgtttacaagaaacccagaaaaaatatcgtatttatcaggaattaacatttgcttttggc
agaagaggtattcagtctttaatgattgaaaatattttaccccaattacaagacgaggca
aatcacattttaaatagtcttacaggtagtcaattaagtgtacaattccttacccaaaaa
ccaaaagctagtcgcagtaaaaaatcatcatctcagtatatagatactttagagattatc
atttctgatgcacaaggaacaaggtcttatgagacttattcggggggggaagccttccgt
atcaattttgccattcgccttgctttatcccgtattctcgcccaaagagcaggtactcgt
ttacaattattaattgtcgatgaaggatttggtactcaagatactgatggttgtaatcgt
ctcattggagctttaaatgcgatcgcatctgaatttgcttgtattttaacagtaactcac
gttaatcaatttaaagaagccttccaaaccagaattgaagtatataaaactcaggaaggc
tcaaaaattaaactttctagttag
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