Cyanobacterium aponinum: Cyan10605_2808
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Entry
Cyan10605_2808 CDS
T02376
Name
(GenBank) ATP-dependent DNA helicase, Rep family
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
can
Cyanobacterium aponinum
Pathway
can03420
Nucleotide excision repair
can03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
can00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Cyan10605_2808
03430 Mismatch repair
Cyan10605_2808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
can03400
]
Cyan10605_2808
Enzymes [BR:
can01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cyan10605_2808
DNA repair and recombination proteins [BR:
can03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cyan10605_2808
MMR (mismatch excision repair)
Other MMR factors
Cyan10605_2808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
DEAD
AAA_11
Viral_helicase1
AAA_30
Arm_vescicular
ResIII
Vp24_capsid
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
AFZ54875
UniProt:
K9Z8G5
LinkDB
All DBs
Position
complement(3341590..3343914)
Genome browser
AA seq
774 aa
AA seq
DB search
MNSRIDFLSHLNLSQRQAVEHFCGPLLVVAGAGSGKTRALTYRIANLISTHKVAPENILA
VTFTNKAAREMKERIELIFAQQMAEEKYGNKLELLGELEQKQIKSKVYRRAIKDLWIGTF
HSLCAKILRYDINKYQDEKGRTWQKNFTILDESDVQSLFKQIVTKNLNLDDKKFEPRKIR
YTISNIKNLGFTPRQYALENPDYRGRVIAEIYEEYQNELAKNNALDFDDLLLIPVRIFQE
NESILGYWHNQFHHILVDEYQDTNQIQYNLIRLLSTNNETNKKYWNWNNRSVFVVGDADQ
SIYSFRMADFTILLNFQEDFGDNLPDQETQTMIKLEENYRSRENILQAANYLIEHNSQRI
DKVLKATRGEGESIYLYRGDNEREEATFVCRQIAQLVRENADLNWGDFAILYRINSQSRA
FEDELIKKNIPYNIVGGLKFYERKEVKDALAYLRLIVNPADTVSLLRIINTPRRGIGKTT
IDNLLTASVELGVPLWEILNDRTSVNTIAGRAAKRVNEFAQLILDCQEMMKESSAVEVLN
HILLASGYSQDLQQQNTDEAENRLENLNELANAMSQFQEDNEDSSLEGFLSSASLASDLD
NLNEDNQAVSLMTLHSAKGLEFPIVFLVGFEQGLLPHNRSLRDPLELEEERRLCYVGITR
AKEQLFITHARERYSWGNVDYCTPSQFLDELPPELLSSNIPPRKSFRHNIIEETPKKKSP
SQSWQEGDRLYHPTFGNGVVTHLLGLGSKNTLVVQFEVGRKIINPSHTKLEKIS
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgaattctcgtattgattttctcagtcaccttaatttatctcaacgtcaggcagtagaa
catttttgtggtcctttattggtcgttgcgggggctggttcgggaaaaacaagggcttta
acctatcgtattgccaaccttatttcaactcataaagtagcaccagaaaatatcttagcg
gttacttttacgaataaagccgcacgggaaatgaaagaaagaattgagttaatttttgct
caacaaatggcggaagaaaaatatggaaataaattagaactattaggagaattagaacaa
aaacagattaaatctaaggtttatagaagggcaataaaagatctttggattggtactttt
cacagtttatgtgctaaaatcttacgttatgatataaataaatatcaagatgaaaaagga
agaacttggcaaaaaaatttcacgattttagatgaatctgatgtgcagagtttgtttaag
caaattgtgactaaaaatcttaatttagatgataaaaaatttgagccaaggaaaatccgt
tatactattagtaatattaaaaatttaggttttactcctaggcaatatgctttagaaaat
cctgattatagaggcagagtaatagcggaaatttatgaggaatatcaaaatgaattggca
aaaaataatgcccttgattttgatgatttgctattaattcctgttagaatttttcaagaa
aatgagtcgattttaggttattggcataatcaatttcatcatattcttgttgacgaatat
caggatactaaccagattcaatacaatttaattaggcttttatctacgaataatgagact
aataaaaaatactggaattggaataacagatcagtttttgtggtaggagatgctgatcag
tcaatctattctttccgtatggcagattttactattttactcaattttcaggaagatttt
ggggataatttaccagatcaagaaactcaaactatgatcaaattagaagaaaattatcgc
tcaagggaaaacattttacaagcggctaattatttaattgaacataactcccaaagaatt
gacaaggtattaaaagccaccagaggagaaggagaaagtatttatctttatcggggagat
aatgaaagagaagaagctacttttgtttgtcggcaaatagcccaattagtgagagaaaat
gctgatttaaactggggtgattttgcaattttgtaccgcattaattctcaatctcgagcc
tttgaagatgagttaattaaaaagaatattccttacaatattgtggggggtttaaaattc
tatgaaaggaaggaagttaaagatgctttagcttatttgcgtttgattgttaatcctgcg
gataccgttagtttgctcagaatcatcaacacaccgagaagaggaatcggtaaaaccaca
attgataatctattgactgcttctgtagagttaggtgtaccattatgggaaatattaaac
gatcgcacctctgttaatactatagcaggaagggccgcaaaaagagtgaatgaatttgcc
caactcattctcgactgtcaggaaatgatgaaagaatcttcggcagtagaagtattgaat
catatcttattagcatcaggatatagtcaagatttgcaacaacaaaacaccgatgaggcg
gaaaatagactggaaaacctcaacgagttagcaaacgctatgtcacaatttcaggaagat
aatgaggatagcagtttggaaggttttttaagtagtgcgtctcttgcttcagatttggat
aatcttaatgaggataatcaggcggtttctttgatgacgttgcattctgcgaagggttta
gaatttcctattgtctttctggtaggatttgaacagggattattaccccataaccgtagt
ttacgagatccactagaattagaggaagaaagacggttatgttatgttggcataactcgg
gcaaaagagcaactgtttattacccatgccagagaaagatattcttggggtaatgtggac
tattgtacaccatctcagtttttggatgagttgccccctgagttactttctagcaatatc
cctcctcgtaaatctttccgtcataacattatcgaagagactcccaagaaaaaatctcct
tctcaatcgtggcaggagggcgatcgcctgtatcatcctactttcggtaatggggttgtg
actcatttattgggattgggaagtaaaaatactttagttgtgcagtttgaggtgggaaga
aaaattattaatcccagtcatacgaagttggagaaaatatcttga
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