Clinocottus analis (woolly sculpin): 137779008
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Entry
137779008 CDS
T10471
Symbol
smarcad1a
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
cana Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cana03036
]
137779008 (smarcad1a)
Chromosome and associated proteins [BR:
cana03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
137779008 (smarcad1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
CUE
ERCC3_RAD25_C
HDA2-3
DEAD
HHH_3
T2SSK
UBA_N4BP1_C
Motif
Other DBs
NCBI-GeneID:
137779008
NCBI-ProteinID:
XP_068422535
LinkDB
All DBs
Position
Unknown
AA seq
1062 aa
AA seq
DB search
MFNLDRFRFDNKATTTTDKDQNSGSKSPESEKENKPAQMKPINATPKSHARGVVFEEVLT
IDLEEDELLSETMAKTPLNRKSKNPIEKSSKNVASDQTDDEDNELDEKMNVILEMFPQLT
RTELLDVIESTSTLDGAVAACLLRFGDKEAPDQGRKRKQDGSSSSQDSGAVRTSKRSKTI
VISDEDDREPSWEKQEAMVRKLQKRFPDQDKEELRLVLQEHDWNVEDALQVLQMFSDPDN
SSFSSPDTEEKKSSKSKNKDKSSQDHRKSKHHKDHRDNKSGRNRKVHRYASETEEESKDD
TDSTKDSEDSESDTLQGAENKSSTSTLSSWLKKSSDSVSSASSVMKTTTSSSLKPPSSSS
STVQMLSRFASGTSIAKKQAVERKRKALASNEHVSSEEEDDVEEEAVSSEFEDSDDELDS
KGGMTDVKKEILHFFGDASIDELSLIAGCSVKKAQKILELRPFESWQNLVDIFTKQNGLS
DSLLLGCRVVLKERKVVVGLMSKCKTISSKMVKQVTEVVERGTGSMQQPSLLNSQNQLKP
YQLIGLKWLLLLHEHKLSGILADEMGLGKTIQAIAFLAELFENGIDGPHLITVPASTLDN
WVRELKLWCPCLKVLVYCGSVEDRRYLRHDLLNNDADCNVIVTTYNMAIGNDSDRALFRK
LPLKYAVFDEGHMLKNMNSLRYRHLMAINAEHRLLLTGTPLQNNLLELMSLLNFIMPSMF
SSSTTQLSKMFSMKSHEEQSRFERDRISQAKLIMKPFILRRVKSEVLKQLPAKEDMVESC
PMSDKQQALYQTLFNKLKASPNGEKRELCNVMMQLRKMANHPLLHRQYFTTEKLKAMSKL
MLKEPTHFDASAALIQEDMEVMSDFELNRLCQQYSSISSYQLEKNLLLDSGKFHHLTELL
ASHKNKGDRVVLFSQFTMMLDIVEVLMKHLKHRYVRLDGSTPIADRIGLIDEYNTDPDIF
VFLLSTRAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKIVKVIKLISKGSI
EDCMLQLSQKKLKLEQDMTAAEGGEGSIPEDMASLLKASLGL
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacttggaccgttttcgctttgacaacaaggcaacaacaaccacagataaagac
cagaacagcgggtccaaaagcccagagtctgagaaggagaacaagccagcgcaaatgaaa
ccgatcaatgccacaccaaagtcccatgcccgaggagtggtttttgaggaggtccttaca
attgacttggaggaagatgagctcctctctgaaacaatggccaaaacaccattaaacagg
aagtccaagaatcctatagaaaagtcatccaaaaatgtggcatcggatcagacggatgac
gaggacaacgaattggatgagaaaatgaacgtaatactggagatgtttcctcagttgacc
aggacggagctcctggatgtcattgagagcaccagcacattggatggcgctgttgctgca
tgccttttaaggtttggtgataaagaagcccccgaccaaggcaggaagagaaagcaggat
ggatccagcagttcccaggacagtggtgcggttcgaaccagcaagagaagcaagacaata
gtgatttctgatgaggacgacagagagccgagctgggagaagcaggaagccatggtccga
aagctgcagaaaaggtttcctgaccaggacaaggaggagctgaggttggtgctgcaggaa
cacgactggaatgttgaggatgccctgcaggttctacaaatgttctcagatccagataat
tccagtttcagctcacctgacacagaagaaaagaaatcgagtaaatcgaagaataaagac
aagtcaagccaagaccacaggaaatcgaagcaccacaaagatcatagagacaataaaagt
gggcgaaatcgaaaggtccacagatatgcgagtgaaacagaggaggagagtaaagatgac
acagactctacaaaggatagtgaagattcagaatcagacacccttcaaggtgcagaaaac
aaaagtagcacttccactttgtcttcatggcttaaaaaaagttctgactcggtgtcctca
gcctcttctgtcatgaaaacaactacctcttcttccctgaagccaccatcctcctcttcc
tccactgttcagatgctgtccagatttgccagtgggaccagtatagctaagaagcaggca
gtagagagaaagaggaaagcacttgcctctaacgaacatgtcagttctgaagaggaagat
gacgtggaagaggaagcggtgagcagtgagtttgaggactccgatgacgagctggattct
aaaggtggcatgacagatgtgaagaaagagatactccatttctttggagatgcgtcgatt
gatgagctgtcgctaatcgctgggtgctctgttaaaaaggcccagaagatcttggaactg
aggccctttgaatcctggcaaaatttggttgatatcttcacgaagcagaatggattgtca
gactctttactgctgggctgcagagttgtcctcaaagagcggaaggtcgtcgtggggcta
atgtccaaatgtaaaaccatttcctcaaaaatggttaaacaggtcactgaggtggtggag
aggggcacaggatccatgcaacagcccagtctgctcaatagccaaaatcagctgaaaccc
tatcagctgattggtctaaagtggctgctgcttctgcatgagcacaaactgagcggtatc
cttgctgatgaaatgggtttggggaaaactatccaggctatagcgtttctggccgagctt
ttcgagaacggaatagacggtcctcatctcatcactgttccggcatcaacgttggataac
tgggtcagggagctgaagctgtggtgcccgtgcctcaaagttctcgtctactgtggatct
gtggaggaccgtcgctacctcagacacgacctcctcaataatgatgcggattgcaacgtt
attgtgaccacgtataacatggccataggaaatgatagcgaccgcgcccttttccgtaag
ctgcctctgaagtatgctgtgtttgatgaaggtcacatgctgaagaacatgaactctctg
cgctaccgtcacctcatggctattaacgcagagcatcggttgctgctgacaggaactcct
ttacagaacaacctcttggagctgatgtcgctcctgaacttcatcatgccttctatgttc
tccagctccactacacagctctccaaaatgttttctatgaaatcccatgaggagcagagc
cgctttgagagggatcgtatttctcaggccaaactcatcatgaaaccttttatcctcaga
agagtcaagagcgaggtcctcaagcagctgccagccaaggaagatatggtagagtcctgc
ccaatgagtgataaacagcaggctctctaccagaccctctttaataagctcaaggcttct
ccgaatggcgagaaacgtgagttgtgcaatgtgatgatgcagttgaggaagatggccaat
cacccgctgcttcatcgacagtactttaccacagaaaagctcaaagcaatgagcaaactc
atgctcaaggagccaactcactttgacgcaagcgctgctctgatccaggaggacatggaa
gtgatgtcagactttgagctgaaccgtctgtgccagcagtactcctccatcagctcctac
cagctagaaaagaatctcctgcttgactctggcaaattccaccatctcacggagctgctg
gcctcacataaaaacaaaggggaccgagtggtgttgttcagtcagttcaccatgatgctg
gacattgtggaggtgctgatgaaacatctaaagcatcgctatgtcagactggatggatcc
acgcccatagcggacaggattgggttgattgatgagtacaacacggatcctgacatattt
gtgttcctgttgtcaacgcgtgctggtggcctgggcatcaacctcacttcagccaacgtc
gtcatcctacatgacatcgactgcaatccctacaacgacaaacaggcagaggacaggtgt
caccgtgtaggccagaccaagatagtaaaggtgattaagctgatcagtaagggcagcata
gaggactgcatgctgcagctgagccagaagaaactaaagctggagcaggacatgactgct
gctgaaggtggtgaaggaagcatacccgaagatatggcatctttgctcaaagcctcgctg
ggactgtga
DBGET
integrated database retrieval system
