Clinocottus analis (woolly sculpin): 137779280
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Entry
137779280 CDS
T10471
Symbol
usp39
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 39
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137779280 (usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cana03041
]
137779280 (usp39)
Spliceosome [BR:
cana03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
137779280 (usp39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
137779280
NCBI-ProteinID:
XP_068423004
LinkDB
All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MMVSLKREREVEVEDEDDEGRVEAKIGRGRVTEDRRSRHCPYLDTINRSVLDFDFEKLCS
ISLSHINVYACLICGKYFQGRGLKSHAYTHSVQFTHHVFLNLHTLKFYCLPDNYEIIDSS
LEDITYVLKPTFTKQHIGGLDKQGKLYRAYDGTTYLPGIVGLNNIKANDYANVVLQAFSN
VPPLRNYFLEEENYRGIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVL
CSKKNFQITKQGDAVDFMTWFLNALHGALGGTKKKKSIIAKAFQGSMRIFSKKLPHPDLT
PEEKQALLVTEEYQEQMSESTFLFLTLDLPTAPLYKDEKEQLIIPQVPLFNILGKFNGNT
EKEYKTYKENFLKRFQLTKLPPYLVFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLTE
EAQLTEKHTTYDLVANVVHDGKPTEGAYRIHVLHHGTGKWYEMQDLQVTDILPQMITLSE
AYIQIWKRQESDDDKKIHTEV
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgatggtttctctgaagcgagaaagggaggttgaagtcgaggatgaggatgacgaaggc
agagtggaagccaaaataggccggggacgtgtgacggaagaccggagaagccgccactgt
ccttaccttgacactatcaacaggagtgtgttggactttgactttgagaaactctgctcc
atctctctctcccacatcaacgtctatgcgtgccttatatgtgggaaatatttccaaggt
agaggtttgaagtcccatgcctacactcacagtgtgcagttcacccatcatgtgttcctc
aatctgcacacgctcaagttttactgtctgccagacaactacgagatcattgactcttca
ctcgaagacatcacctatgtgctgaaaccaactttcaccaagcagcacattggagggcta
gacaagcagggtaaactataccgagcctacgatggtacgacttacctgccaggcattgta
gggctgaacaacatcaaagccaatgattacgccaatgtggtattacaggctttttccaat
gttccacccttgcgaaactacttcctggaggaggaaaactacaggggaatccgcaggcca
ccaggagacatcatgttcctcttggtgcagcggtttggtgagctgatgcgcaaactgtgg
aatccaagaaacttcaaggctcatgtgtctccacatgagatgctgcaggctgttgtgctg
tgcagcaagaagaacttccaaattacaaagcaaggagatgctgtggacttcatgacatgg
ttcttgaacgctctgcatggtgctcttggtggcacaaagaaaaaaaaatcaataattgca
aaagcatttcaaggctccatgcggatcttctccaagaaacttccacacccagatttaaca
ccagaggagaaacaggcattgctcgtgacagaggagtaccaggagcagatgtctgagtcc
accttcctgtttctaacccttgacctcccaacagctccattgtataaggatgagaaggag
cagcttattatcccgcaggtccctctcttcaacatcctgggcaagttcaacggcaacaca
gagaaggagtacaaaacctacaaagagaattttctcaaaaggttccagctgaccaaactg
cctccgtacctcgtcttttgcatcaaaagattcaccaagaacaacttctttgtggaaaag
aaccccacaatcgtcaatttccccatcacgaatgtagacctccgtgagtacttgacagaa
gaagctcaactcacagagaaacacacaacttatgaccttgttgccaacgtggtgcatgat
gggaaacccaccgaaggagcgtacagaatacatgttctgcatcatggaactgggaagtgg
tatgagatgcaggatctgcaggtgactgacattctcccccagatgattacgctgtcagag
gcttacatccagatctggaagagacaagagagtgacgatgacaaaaagatccacacggag
gtgtaa
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