Clinocottus analis (woolly sculpin): 137779392
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Entry
137779392 CDS
T10471
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04120
Ubiquitin mediated proteolysis
cana04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
137779392 (syvn1)
04120 Ubiquitin mediated proteolysis
137779392 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cana04121
]
137779392 (syvn1)
Enzymes [BR:
cana01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137779392 (syvn1)
Ubiquitin system [BR:
cana04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
137779392 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
Prok-RING_4
FANCL_C
Motif
Other DBs
NCBI-GeneID:
137779392
NCBI-ProteinID:
XP_068423190
LinkDB
All DBs
Position
Unknown
AA seq
660 aa
AA seq
DB search
MVRSALVTATSLALTGAVVAHAYLLKNQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWIFHFRVLSLMGLLAILDFLFVNHACHSIITRGASVQLVFGFEYAI
LMTMVLTTFIKYLLHTVDLQSENPWDNKAVYMLYTELFTGFIKVLLYIAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLLASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRATNNNQAPAAAQAPPPAPAAPANAP
AAPPANLAPGMLPGFPPGVFPFWGPFPGVPPPAAAGAAAPGGTDAPQTEAAQAAGSSQAA
SSTADAAAAPGSAIPGFPFSFPPPPFHTAPWLMPPPPPFVSSMPPPPPSLSRLSEEELRE
MEADGRRGLEARLQCLQNIHTLLDAAMLNIHHYLSTVTTLAPPRAEGGGGAGAAGGAGAA
GGAGAAGGAGAAGGAGAAGGTNAGGTNAGGAASPPAASSSTDSRSQEKESSSSSTEQVDG
AAVSPQPADSTSTASDTERKEELDEGVAGDEDGEPNAAELRRRRLRKLETTPSSSPPPDN
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgatcagccttggtgactgccaccagtctggccctgactggggccgtggtggca
cacgcctacctcctgaaaaaccagttctacccgactgtggtctacctcaccaagagcagc
cccagcatggcggtgttgtacattcaggcctttgtgttggtgttcctgctgggaaagttc
atgaggaaggtcttttttggacagctacgggctgcagaaatggagcatctcatagagcgc
tcctggtacgctgtgaccgagacgtgcctggcgttcactgtgttcagggacgacttctcc
cctcgctttgtcgcccttttcacacttctgctcttccttaagtgcttccactggctggcg
gaggaccgggtggactttatggaacgaagtccaaacatatcttggatttttcacttcaga
gtgttatctctcatgggactgctggctatcctggacttcctgtttgtcaaccacgcctgt
cacagcatcatcacccgaggagcctcggtgcagctcgtgtttggattcgagtatgccatc
ctgatgaccatggtgctgacgaccttcatcaagtaccttctgcacaccgtcgacttgcag
agtgagaatccctgggacaacaaggccgtctacatgctgtacaccgagctcttcacaggt
ttcatcaaagtgctcctgtacattgccttcatgaccatcatgataaaggtccacaccttc
cctctgttcgccatccggcccatgtatctggctatgaggcagtttaagaaagccgtaaca
gacgccataatgtcccggagagccatccgcaacatgaatacgctgtaccccgacgctact
cctgaagatctgctggcctccgacaacgtctgtatcatctgtcgagaggaaatggtgacc
ggagccaagaaactgccttgtaatcacattttccactccagctgcctgcgctcctggttc
cagaggcagcagacctgcccgacctgccgcatggacgtcctccgcgcgactaacaacaat
caggcgccagctgcggcccaggccccgccccctgcgcccgcggcccccgccaacgccccc
gcggcgccgcccgccaacttggcccccggcatgttacctggcttccctcccggcgtcttc
cccttctggggtcccttccctggggtgcctccgcccgccgccgcaggggccgcggctccg
ggtggcaccgacgcaccgcagacagaggccgcgcaggccgccggctccagccaggccgcc
tcgtcgaccgcagacgccgccgcggctccgggatcggcgatcccgggcttccccttctcc
ttccccccgcctcccttccacacggcgccgtggctcatgcctccaccgcctcccttcgtg
tcgtccatgcctcctcctcctccctctctgtcccggctgtccgaggaggagctgagggag
atggaggcggacggtcggcggggcctcgaggcccggctccagtgtctccagaacatccac
accctgctggacgccgccatgctcaacatccaccactacctcagcaccgtcaccacgcta
gctcctccgagggccgagggtgggggcggggccggagccgccggcggggccggagccgcc
ggcggggccggagccgccggcggggccggagccgccggcggggccggagccgccggcggg
accaacgccggcgggaccaacgccggcggggccgcttcccctccggcagcgagcagcagc
acggacagtcgcagccaggagaaggagtccagctcctccagcactgagcaggtggacggc
gccgcagtctcccctcagccagcggactctacttccaccgcctcggacacggagagaaaa
gaagagctggacgagggcgtggcgggggatgaggacggagagcccaacgccgccgagctg
aggcgccgccgcctccgcaagctggagacgacgccgtcgtcctcgccgcctcccgacaac
tga
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