Clinocottus analis (woolly sculpin): 137779517
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Entry
137779517 CDS
T10471
Symbol
sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04517
IgSF CAM signaling
cana04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
137779517 (sptbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
137779517 (sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cana04812
]
137779517 (sptbn1)
Cytoskeleton proteins [BR:
cana04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
137779517 (sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
137779517 (sptbn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
DYH2-5-8_CC
BORCS6
CH_2
Motif
Other DBs
NCBI-GeneID:
137779517
NCBI-ProteinID:
XP_068423433
LinkDB
All DBs
Position
Unknown
AA seq
2353 aa
AA seq
DB search
MELQSATGGLPGPLSPSLDYGGPLSPGPSHAAGPGLSPGFTGQAAFNYNQLEGRFKQLQD
EREAVQKKTFVKWVNSHLSRSSCRITDLYMDLRDGRMLIKLLEVLSGEKLPKPTKGRMRI
HCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNK
EKKSAKDALLLWCQMKTAGYPNVNIHNFSTSWRDGMAFNAIIHKHRPDLIDFDKLKKSNA
HHNLQNAFNLAEQHLGLTKLLDAEDISVDHPDEKSIITYVVTYYHYFSKMKALKVEGKRI
GKVLDNAIETEKMVEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTA
EKPPKFTEKGNLEVLLFTIQSKMRANNQKVYTPREGKLISDINKAWERLEKAEHERELAL
RTELIRQEKLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETD
IAAYEERVQAVVSVAREMESENYHDIKRITARKDNVIRLWEYLLELLKARRLRLELTLGL
QKVFQEMLYIMDWMDEMKMMLLSQDYGKHLLGVEDLLQKHALVEADISIQADRVRNVNRN
AQKFADDMDGYKPCDPQIIRDRVAHMDFCYQELSQLAAERRARLEESRRLWKFFWEMAEE
EGWIREKEQILSSEDYGKDLTGALRLLSQHKAFEDEMSGRAAHLQQTIKQGEELVANDHF
GADKIKERNQDIQEQWAALERLSAVRKARLEEACNQHQFQADADDIDTWMLDVLRIVSSV
DVGHDEFSTQALVKKHKDVAEEIGSYRPLIEALHEQSRTLPPEKADSEEVQARLAGIEER
YKEVVELTRLRKQALQDALALYRMLSEACACEVWIDEKEQWLNSMDIPEKLEDLEVVQHR
FESLEPEMNNQASRVAVVNQVARQLIHCGHPSEKEIKTQQDKLNTRWSQFRDLVDQKKDS
LSSALGVQNYHLECNETKSWIKEKTKVIESTQELGNDLAGVMALQRKLTGMERDLAAIED
KLGDLGKEADRLASEHPDQSDAIKGRLDGITGVWGEMKDTMKNREESLGEASKLQQFLRD
LDDFQSWLSRTQTAIASEDMPNAPAEAEKLLTQHENIKNEIRNYEEDYQKMRDMGETVTR
GQTDAQHMFLRQRLQALDTGWNELHKMWENRQNLLSQSHAHQLFLRDTKQAEAFLNNQEY
VLAHTEMPATLEAAEAAIKKQEDFMTTMDANEEKIGGVLDTGRRLVTDGNINAERAQEKV
DSIDQRHKKNRAAASDLLSRLKDNRDLQRFLQDCQELSLWINEKMLTAQDMSYDEARNLH
SKWLKHQAFMAELQSNKEWLDKIDKDGQALMAEKPETEAMVKEKLASLKAMWEELESTTQ
TKAKCLFDANKAELFTQSCADLDKWLAGLDGQLQSDDYGKDLTSVNILLKKQQILESQVE
VRQKEVGELRGQSQALSQEGKGSEEVDGQRIGVEKKFQSLQDPLQRRRDNLMASREIHQF
NRDVEDEILWVEERMALATSTDHGNNLQTVQLLIKKNQTLQKEIQGHQPRYDDIFERSQH
VLRENGPTADAIRRRLAELQALWEQIRKETEKRHTRLSEAHEAQQYYFDAAEAEAWMSEQ
ELYMMSEEKAKDEQSSVAMLKKHHILEQAVEDYADTVHQLSGTSRGLVAAEHPDSERIGM
RQSQVDKLYAGLKDLSEERRGKLDERLRLFQLNREVDDLEQWIAEREVVAGSHELGQDYE
HVTMLQERFREFARDTGNIGQERVDTVNQQADELINTGHGDAATIAEWKDGLNEAWADLL
ELIDTRTQILAASFELHKFYHDAKEILNRILDKHKKLPEELGRDQNTVETLQRMHTTFEH
DIQALGTQVRQLQEDAVRLQSAYAGDKADDIQKREGEVLEAWKNLLEAAEGRRVKLVETG
DKFRFFSMVRDLMLWMEDVIRLIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTASI
ELGKALLARKHYASEEIKEKLLQLTDKRKDMIDKWEDRWEWLRLVLEVHQFSRDAGVAEA
WLLGQDPYLCSREIGQNVDEVEKLIKRHEAFEKSAATWEERFSALERLTTMELLEVRRMQ
EEEEKSRQPPPTEAQPGDAAAQHREGELVSQNGLPSDQESPRDAEGGDVVNGVSEPSPTG
SPGAARKGKPSQAATLPAKSQQDAPTSQLESFLHRKHEWEGHNKKASSRSWHNVYCVINQ
QEMGFYKDQKSASQGIPYHSEIPVSLKDAVCEVALDYKKKKHVFKLKITDGNEYLFQAKD
DEEMNLWISAISTAMTGDKAAEVTPSGHSTPAPAARAQTLPASVAATASAPESSPGKRDK
DKEKRFSLFSKKK
NT seq
7062 nt
NT seq
+upstream
nt +downstream
nt
atggagctccagagcgccaccggcggcctccccgggcccctctccccgtctttggactac
ggcggcccgctgtcgcccggcccgtctcacgccgccggccccggcctcagccccgggttc
accggccaggccgccttcaactacaaccagctggagggcaggtttaaacagcttcaagat
gagcgtgaggcggtccagaagaagaccttcgtcaagtgggtgaactcccacctgtcccgg
tcctcgtgccggatcacggacctgtacatggacctgagggacggacgcatgctcatcaag
ctgctggaggtcctgtcgggggagaagctgcccaaacccaccaagggccggatgaggatc
cactgtctggagaacgtggacaaggctctgcagttcctgaaggagcagagggtccacctg
gagaacatgggctcccacgacatcgtggacggaaaccaccgcctcaccctggggctcatc
tggaccatcatcctccgcttccagatccaggacatcagcgtggagacggaggacaacaag
gagaagaagtcggctaaagatgctctgctgctctggtgtcagatgaagacggcgggatat
ccaaacgtcaacatccacaacttcagcaccagctggagggacgggatggccttcaacgcc
atcatccacaaacacagaccggacctgatcgactttgataagctgaagaaatcaaacgct
caccacaacctgcagaatgcgttcaacctggccgagcaacacctgggcctcaccaagctg
ctggatgccgaggacatcagcgtggaccaccctgacgagaagtccatcatcacctacgtg
gtgacctactaccactacttctccaagatgaaggcgctgaaggtggagggcaagagaatc
ggcaaggtcctggacaacgccatcgagacggagaagatggtggagaagtacgagtccctg
gcgtcggacctgctggagtggatcgagcagaccatcatcatcctcaacaacaggaagttt
gccaactccctggtgggcgtccagcagcagctgcaggccttcaacacgtaccgcacggcg
gagaaaccaccgaagttcacagagaaggggaacctggaggttcttctgttcaccatccag
agtaagatgagagccaacaaccagaaggtttacactcctcgagagggaaaactcatctcc
gacatcaacaaggcgtgggagcgtctggagaaggcggagcacgagcgcgagctggccctg
aggacggagctcatccgccaggagaagctggagcagctggcgcggcgcttcgaccgcaaa
gccgccatgagggagacgtggctgagcgagaaccagcggctcgtctcccaggataacttt
ggatttgaccttcaggccgtagaagctgcgactaagaagcacgaagccatcgagacggac
atcgccgcctacgaggagcgagttcaggcggtggtttccgtggcgagggagatggagtcc
gagaattaccacgacatcaaacgcatcacggccaggaaggacaacgtgatccggctgtgg
gaatacctgctggagctgctgaaggcgcggcggctgcgcctggagctgacgctcggcctg
cagaaggtcttccaggagatgctgtacatcatggactggatggacgagatgaagatgatg
ctgctctctcaggactatgggaagcacctgctgggcgtggaggacctgctgcagaaacac
gccctggtggaggccgacatcagcatccaggccgaccgcgtccgcaacgtcaaccgcaac
gctcagaagttcgccgacgacatggacggttacaagccctgcgaccctcagatcatcagg
gatcgcgtcgctcacatggatttctgctaccaggagctgagtcagctggcggctgagcgg
cgagctcgcctggaggagtcccgccgcctctggaagttcttctgggaaatggccgaagag
gagggctggatccgggagaaggagcagatcctgtcctcggaggattacgggaaggacctg
acgggggcgctgcggctgctgagtcagcacaaagccttcgaggacgagatgagcgggcgc
gccgcccacctgcagcagaccatcaagcagggcgaggagctggtggccaacgaccacttc
ggagccgacaagatcaaagagcgcaaccaggacatccaggagcaatgggcggctttggag
cgtctgtccgccgtccgcaaagctcgcctggaggaggcctgcaaccagcaccagttccag
gccgatgccgacgacatcgacacctggatgctggacgtgctgcgcatcgtctccagcgtg
gacgtgggccacgacgagttctccacccaggcgctggtgaagaagcacaaggacgtggcg
gaggagatcggcagctaccggccgctcatcgaggcgctgcacgagcagtcgcgcacgctg
ccgccggagaaggccgactccgaggaggttcaggcgcggctggcgggcatcgaggagcgc
tacaaggaggtggtggagctcacgcggctgcgcaagcaggcgctgcaggacgcgctggcg
ctctacaggatgctgagcgaggcctgcgcctgcgaggtgtggatcgacgagaaggagcag
tggctcaacagcatggacatccccgagaagctggaggacttggaggtcgtccagcaccgg
ttcgagagtctggagccggagatgaacaaccaggcgtcccgggtcgccgtggtgaaccag
gtcgctaggcaactaatccactgcggacatcccagcgagaaggagatcaaaacccagcag
gacaaactcaacaccaggtggagtcagttcagagacctggtggaccagaagaaggacagc
ctgagctccgccctgggagtccagaactaccacctggagtgcaacgagaccaagtcctgg
attaaagagaagaccaaggtgatcgagtccacgcaggagctgggcaacgacctggccggc
gtcatggcgctgcagaggaagctgacgggcatggagcgcgacctggccgccatcgaggac
aagctgggcgacctgggcaaggaggcggaccgcctggcctcggagcacccggaccagtcc
gacgccatcaagggccgcctggacgggatcaccggcgtctggggcgagatgaaggacacc
atgaagaaccgtgaggagtccctcggcgaggccagcaagctgcagcagttcctgcgcgac
ctggacgacttccagtcgtggctgtcgcggacgcagacggccatcgcctcggaggacatg
cccaacgcgccggccgaggccgagaagctgctgacgcagcacgagaacatcaagaacgag
atccgaaactacgaggaggactaccagaagatgcgcgacatgggcgagacggtgacgcgg
ggccagacggacgcgcagcacatgttcctgcggcagcggctgcaggcgctcgacaccggc
tggaacgagctgcacaagatgtgggagaaccggcagaacctgctgtcccagtcccacgcg
caccagctgttcctcagggacaccaagcaggccgaggccttcctcaacaaccaggagtac
gtgctggctcacacggagatgcccgccactctggaggcggccgaggccgccatcaagaag
caggaggacttcatgaccaccatggacgccaacgaggagaagatcggcggcgtgctggac
accgggcgccgcctggtgaccgacggcaacatcaacgcggagcgcgctcaggagaaggtg
gactccatcgaccagaggcacaagaagaaccgagcggccgccagcgacctgctgtcgagg
ctgaaggacaacagagacctgcagaggttcctgcaggactgccaggagctgtcgctgtgg
atcaacgagaagatgctgacggctcaggacatgtcgtacgacgaggccaggaacctccac
agcaagtggctgaagcaccaggccttcatggccgagctgcagtccaacaaggagtggctg
gacaagatcgacaaggacgggcaggcgctgatggcggagaagccggagacggaggccatg
gtgaaggagaagctggcgtccctgaaggccatgtgggaggagctggagtccaccacccag
accaaggccaagtgtctgtttgacgccaacaaggcggagctcttcacccagagctgcgcc
gacctggacaagtggctggccggcctggacgggcagctgcagtccgacgactacggcaaa
gacctcacctccgtcaacatcctgctgaagaagcagcagatcctggagagccaggtggag
gtgcgtcagaaggaggtgggcgagctgcgcggccagtcgcaggccctcagccaggagggc
aagggctccgaggaggtggacggccagaggatcggcgtggagaagaagttccagtcgctc
caggacccgctgcagaggaggcgggacaacctcatggcgtcccgcgagatccaccagttc
aaccgggacgtggaggacgagatcctgtgggtggaggagcgcatggctctggccacgtcc
accgaccacgggaacaacctgcagacggtgcagctgctcatcaagaagaaccagaccctg
cagaaggagatccagggccaccagccgcgctacgacgacatcttcgagcgcagccagcac
gtcctccgggagaacggcccgacggccgacgccatccggcggcgcctcgccgagctgcag
gcgctctgggagcagatccgcaaggagacggagaagcggcacacgcgcctcagcgaggcc
cacgaggcccagcagtactactttgacgccgccgaggccgaggcctggatgagcgagcag
gagctctacatgatgtcggaggagaaggccaaggacgagcagagttcggtggcgatgctg
aagaagcatcacatcctggagcaggcggtggaggactacgccgacaccgtgcaccagctg
tccggcaccagccgaggcctggtggccgccgagcaccccgacagcgagcggatcggcatg
cgtcagtctcaggtggacaagctgtacgccgggctgaaggacctgtcggaggagcgccgg
gggaagctggacgagcggctgcgtctcttccagctgaaccgggaggtggacgacctggag
cagtggatcgccgagcgcgaggtggtggccgggtcccacgagctggggcaggactacgag
cacgtcacgatgctgcaggagcgcttcagagagttcgcccgcgacaccggcaacatcggc
caggagcgcgtggacaccgtcaaccagcaggcggacgagctgatcaacaccggccacggc
gacgccgccaccatcgccgagtggaaggacggcctgaacgaggcctgggccgacctgctg
gagctcatcgacacccgcacgcagatcctcgccgcctccttcgagctccacaagttctac
cacgacgccaaggagatcctcaaccgcatcctggacaaacacaagaagctgcccgaggag
ctgggccgcgaccagaacacggtggagacgctgcagaggatgcacaccaccttcgagcac
gacatccaggcgctgggaacacaggtgcggcagcttcaggaggacgccgttcgcctgcag
tcggcgtacgccggagacaaagccgacgacatccagaagagagaaggagaggtcctcgag
gcctggaagaacctgctggaggcggcggagggccggcgggtgaagctggtcgagaccgga
gacaagttccgcttcttcagcatggtgcgcgacctgatgctgtggatggaggacgtcatc
cggctgatcgaggcccaggagaagccccgcgacgtgtcgtcggtggagctgctgatgaac
aaccaccagggcatcaaggcggagatcgacgcccgaaacgacagcttcacggcctccatc
gagctgggcaaagctctgctggccaggaagcactacgcgtcagaggagattaaagaaaag
ttgctacagttgacggacaagaggaaagacatgattgacaagtgggaggaccggtgggag
tggctgagactggtcctggaggtgcaccagttctcccgggacgcgggcgtggccgaggcc
tggctgctgggtcaggatccgtacctgtgcagcagggagatcggccagaacgtggacgag
gtggagaaactcatcaagcgccacgaggccttcgagaagtcggccgccacctgggaggag
cgcttctccgccctggagaggctgaccacgatggagttattggaagtgcgaagaatgcaa
gaggaagaagagaagagcagacaacccccgcccactgaggcgcagccgggcgacgctgca
gctcagcacagggagggcgagctggtgtctcagaacgggctgccgtccgatcaggagtct
cccagggacgcggaaggcggcgatgtggtgaacggggtgtcggagcccagccccacgggg
tctcccggggcggctcgcaagggcaaacccagccaggcggcgaccctgccggccaagtcg
cagcaggacgctcccacgtcccagctggagagcttcctgcaccgcaaacacgagtgggag
ggacacaacaagaaggcttccagcaggtcgtggcacaacgtgtactgtgtgatcaaccag
caggagatgggcttctacaaggaccagaagagcgccagtcagggcatcccctaccacagc
gagatccccgtcagcctgaaggacgccgtctgcgaggtggcgctggactacaagaagaag
aagcacgtcttcaagctcaagattactgacgggaatgagtatctcttccaagccaaagat
gacgaggagatgaacctgtggatctcggccatctcgacggccatgacgggcgacaaggcg
gcggaggtgacgcccagcggccacagcacgccggcgccggccgcgcgcgcccagacgctg
ccggcctccgtcgccgccaccgcgtcggcgccggagtccagcccgggcaaacgggacaaa
gacaaggagaaacgcttcagtctgttcagcaagaagaaataa
DBGET
integrated database retrieval system
