Clinocottus analis (woolly sculpin): 137779574
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Entry
137779574 CDS
T10471
Symbol
gbf1
Name
(RefSeq) Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
137779574 (gbf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cana04131
]
137779574 (gbf1)
Membrane trafficking [BR:
cana04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
137779574 (gbf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
TPR_28
Sec7-like_HUS
DUF758
CYTL1
Motif
Other DBs
NCBI-GeneID:
137779574
NCBI-ProteinID:
XP_068423603
LinkDB
All DBs
Position
Unknown
AA seq
1891 aa
AA seq
DB search
MVDKNIYIVQGEIGTVVGAIKRNSRWNTHTPLDEEQDPLLNSFGQLKDILNHIQELSDVE
PNVFLRPFLEVVRSEDTTGPITGLALTSVNKFLSYGLIGRPSFKGTVVSSPSADANHEAA
AEAIENMADAVTHARFVGTDPASDEVVLMKILQVLRTLLLTPVGAHLTNESVCEIMQSCF
RICFETRLSELLRKSAEHTLVDMVQLLFSRLPQFKEEAKSFVGANMKKAYNIMWKNKRVQ
LKMRAGGMSESSKWKKQKRSPRPPRHMVRSPSGQMDSSQSSTLSNNNLSGGVPFIEQGSG
LPASDSAASSVSSPTATDSGLDTCSKATSREDLSDLEQCNSSASTPCTAGTLPGSEPGSP
DAHVGSDAQSASVESIPEVLEDKDSVTEQSDGGSIHDMDYVNPRGVRFTQSTQRDGASII
PYGLPCLRELFRFLISLTNPQDRHNTDAMMHMGLQLLTVALESAHITNYQSLLGLVKDEL
CRHLFQLLSVDRMNLYTSSIRCCFLLFESMRVHLKFQLEMYLKKLMDIVTSENIKMPYEM
KELALEALVQLWRIPSFVTELYINYDCDFYFSNLFEDLTKLLSKNAFPVSGQLYTTHLLS
LEALLTVIDSTEAHCQAKVLNSSAQQDQSETLLAEGDASTTSNGTDATADVSTLDSTSDP
SLPPPESAAPCPPTSGHLMAEKMKLGRQDQGENDSAEKRAVKKPQRFSSCLPDSQELVDI
RAKKKLLITGTEQFNQKPKKGIQFLQEKGLLSSPLDNNQVAQWLRENPRLDKKMIGEYVS
DRKNMELLDSFVNTFGFQGLRIDEALRLYLEAFRLPGEAPVIQRLLETFTDNWHKVNGSP
FVTNDAGFALAYAVIMLNTDQHNHNVRKQNIPMTIEQFKKNLKGVNGNIDFDQDMLEDLY
NAIKNEEIVMPDEQSGLVKDNYVWSVLLHRGATPEGVFLHLPPGSYDHDLFTMSWGPTIA
ALSYVFDKSLDDVILQKAITGFRKCAMIAAHYGFSDVFDNLIISLCKFTTLSSESVENLP
TVFGSNSKAQTAAKTVFDLAHRHGDILREGWKNIMDAMLQLFRAELLPKAMVEVEDFVEP
NGKISLQREETPSNRGESAVLSFVNWLTLSGAEQSGLRGPSTENQEAKQAAVLCIKQCDP
EKLITESKFLQLESLQDLMKALISVTPDEETYDEEDAAFCLEMLLRIILENRDRVSCVWQ
TVRDHLYHLCVHPNESCFLVERAVVGLLRLAIRLLRREDISSQVLLSLRLLLMMKPPVLS
RVSREVAFGLHELLKTNAANIHSTNDWFTLFSLLECIGAGVKPPASFQLSSTSTDTETGA
LSDSELPSHHVSEVSLDRGYTSDSGIYTEHSKTRMPRSTTDVDAASSGWLVVGKDDLEMS
KSPPVMNSKAQLNHPLVNQYSLTLGQDLGQHDTKSLIKCVETLSFIVRDAAHVTPDNFEL
CVRAIRVFVEASLNGGYRNHDKKKSHKYYDSKSRMKKKAGGRDKEGGGGARRGGSRASNQ
RPPRSHSDDEEDEAVPASYHTVSLQVSQDLLDLMHTLHTRAANIYSSWAEEQRHLEAAGR
KIEADSQTLWTSCWCPLLQGIAWLCCDARRQVRMQALTYLQRALLVHDLQTLDAAEWESC
FNKVLFPLLTKLLDNISPADVGGMEETRMRACTLLSKVFLQHLSPLLSLPTFAALWVTIL
DFMDKYMHAGSSDLLLEAIPESLKNMLLVMDTAGIFHSADSRTGYSNLWEITWERIVCFL
PHLREELFKQTIIPDPVPSPPATPSAGRPSSPPVSQPPSPVPVTPAETRTSSRPASPLEP
QPGSDRSSPVPPSVPAVPLTTPPALSPSPLSHSPSPLSHAPFILQPLASPLQVGVPPMSL
PIILNPALIEATSPVPLLPGPGPTSPSGEVK
NT seq
5676 nt
NT seq
+upstream
nt +downstream
nt
atggtggacaagaacatctacatcgtccaaggggaaattggcaccgttgtcggagctatc
aagagaaactccagatggaacacacacactccactggacgaagaacaggacccattactc
aacagcttcggccaactcaaggacatactcaaccacatacaagagctctctgacgtggag
ccaaacgtcttcctgaggcccttcctggaagtggtccgctccgaggacaccaccggacca
atcacaggcctcgccctcacctccgtcaacaagttcctttcctacggccttataggtcgg
ccttcttttaaaggaaccgttgtctcctctccgtctgcagacgctaaccatgaagccgcg
gcggaggccatcgagaacatggccgacgccgtcacgcacgccaggtttgtggggacggac
cccgccagcgatgaagtggtcctgatgaagatcctccaggtcctgaggactctgctgctg
acgcccgtcggagcccacctgaccaacgagtccgtgtgtgagatcatgcagtcctgcttc
aggatctgcttcgagacgcgcctcagcgagctcctcaggaagtcagctgaacacacactg
gtggacatggtgcagctcctgttctccagacttccacagttcaaagaggaggccaagagt
tttgtgggcgccaacatgaagaaggcttacaatatcatgtggaaaaacaaacgagtgcag
ttgaagatgcgcgccggcggcatgagcgagtcgtccaagtggaagaagcagaagcgctcg
ccgaggccgcctcgccacatggtccgaagcccctccggccagatggactcgagccagtcc
agcacgctcagcaacaacaacctctcaggcggcgtcccgttcatcgagcagggctcgggc
ctcccggcgtcggacagcgcggcttcgtccgtctccagccccacggccaccgacagcggc
ctggacacctgctccaaagccacgtccagggaggacctgtccgacctggagcagtgcaac
tcctccgcctccaccccctgcaccgccggcacgctccccgggtccgagcccggctctccg
gatgcacacgtagggtctgacgcccagtcggcctcggtggagtccatccccgaggtcctg
gaggacaaagactcggtgacggagcagtcggacggcggctccatccacgacatggactac
gtcaaccccagaggtgtgcgcttcacacagtccacccagagagacggagcgtccatcatc
ccttacggcctgccctgcctgagggagctcttccgcttcctgatctcgctgaccaacccg
caggaccgccacaacacggacgccatgatgcacatgggcctgcagctgctgaccgtcgcc
ctggagtcggcgcacatcaccaactaccagtcgttgctcgggctggtgaaagacgagctg
tgcagacatcttttccagttgctgagcgtggaccggatgaacctctacacttcctccata
cgctgttgcttcctgcttttcgagagcatgagagtgcatctgaagttccagctggagatg
tacctgaagaagctgatggacatcgtcacgtcggagaacattaagatgccctacgagatg
aaggagctggctctggaggcgctggtgcagctctggaggatccccagcttcgtcacggag
ctgtacatcaactacgactgcgacttctacttctccaacctgttcgaggacctcaccaag
ctgctgtccaagaacgcgttcccggtgtcggggcagctctacaccacccacctgctgtcg
ctggaggcgctgctcacggtgatcgacagcaccgaggcccactgccaggccaaggtgctc
aatagcagcgcccagcaggaccagtctgagacgctgctggcggagggagacgcctccacc
acctccaacgggacggacgccacagccgacgtgagcacactggacagcaccagtgatccc
agtcttccgccaccggagagcgcggcgccgtgcccgccgaccagcggccacctgatggcg
gagaagatgaagctgggtcgacaggaccaaggggagaacgactccgcggagaagcgagcc
gtgaagaagcctcagcgcttctcctcctgcttacccgattcccaagagttggtggatatt
cgagcgaagaaaaagctgctgatcaccggcacggagcagttcaaccagaagcccaagaag
gggatccagttcctgcaggagaaaggcctgctcagcagccctctggacaacaaccaggtg
gcccagtggctccgcgaaaacccccgactggacaagaagatgatcggcgagtacgtcagc
gatcgcaagaacatggagctcctggacagctttgtgaacacgttcggcttccaggggctt
cgtatcgacgaggccctgcggctctacctggaggccttcaggctccccggagaggctccc
gtcatccagagactcctggaaacgttcacagacaactggcataaggtgaacggctctccc
ttcgtgaccaacgacgccggcttcgccctggcatacgccgtcataatgctgaacactgac
cagcacaaccacaacgtccgcaagcagaacatccccatgaccatcgagcaattcaagaaa
aatctgaagggcgtgaatggaaacatcgactttgaccaggacatgttggaggatctctac
aacgccatcaagaacgaggagatcgtgatgcccgacgagcagtccggcctggtgaaggat
aactacgtgtggagcgtgctgctgcaccgcggcgccacgcccgagggcgttttcctccac
ctgccgcccggcagctacgaccacgacctgttcaccatgagctgggggcccaccatcgcc
gccctgtcctacgtgttcgacaagagcctggacgacgtcatcctgcagaaggccatcacc
ggcttcaggaagtgcgccatgatagcagctcactacggcttcagtgacgtctttgacaac
ttgatcatctcactctgcaagttcaccaccctgagcagtgagtctgtagaaaacctcccc
acggtgttcggcagcaacagtaaagctcagacggcggccaagacggtgttcgacctcgcc
caccggcacggggacatcctgcgtgagggctggaagaacatcatggacgccatgctgcag
ctgttcagggccgagctgctgcccaaagccatggtggaggtggaggactttgtggagccc
aacgggaagatttctcttcagagggaggaaacgccatctaaccgcggcgagtcggccgtg
ttgagcttcgtgaactggctgacgctgagcggagccgagcagtccggactcagaggaccg
tccacggagaaccaggaggccaagcaggcggccgtcctctgcatcaagcaatgtgacccg
gagaagctgatcacggagagtaagttcctccagctggagtctctgcaggacctcatgaag
gctctgatatccgtcacccccgacgaagagacctacgatgaagaggacgccgccttctgc
ctggagatgctgctgcgcatcatcctggagaaccgggaccgcgtgtcgtgtgtgtggcag
acggtgagggaccacctctaccacctctgcgtccaccccaacgagagctgcttcctggtg
gagagggccgtggtgggactactgcggctcgccatccgcctgctgcgccgagaagacatc
agctctcaggtcctcctctcgctgcgcctcctgctgatgatgaagcctcccgtgttgtcg
cgggtcagcagggaggtggccttcggcctccacgagctgctgaagaccaacgcggccaac
atccacagcaccaacgactggttcacgctcttctccctgctggagtgcatcggggccggg
gtgaagccgcccgcctccttccagctctcctccacctccaccgacaccgagacaggagcg
ctgtcagacagcgagctgccgtctcatcacgtcagcgaggtgagtctggaccgaggctac
acgtccgactcggggatctacaccgagcacagcaagaccaggatgcctcgctccaccacg
gatgtggatgcagcaagcagcggctggctcgtggtcggtaaagacgaccttgagatgagc
aagagccctccggtgatgaactccaaggctcagctgaaccacccgctggtgaaccagtac
agcctgacgctgggccaggacctgggccagcacgacaccaagtccctcatcaagtgcgtg
gagacgctgtcgttcatcgtccgcgacgccgcccacgtcacgccggacaactttgagctg
tgcgtccgggccatccgagtgttcgtggaggccagcctcaacggaggttaccgcaaccac
gacaagaagaagagccacaagtactacgactccaagtcccgcatgaaaaagaaggcggga
gggcgggacaaggagggagggggcggggccaggcgaggcggcagccgggcgtccaatcag
cgcccgccgcgctcccacagcgacgacgaggaggacgaggccgtgccggccagctaccac
acggtgtcattacaggttagtcaggacctgctggacctcatgcacactctgcacacgcgg
gccgccaacatctacagctcctgggcagaggagcagcgccacctggaggctgcagggagg
aagatcgaggccgattcccagactctgtggaccagctgctggtgcccactgctgcagggc
atcgcgtggctgtgctgtgacgccaggcgtcaggtccggatgcaggcgctcacctacctg
cagagggcgctgctggtgcacgacctgcagacactggatgctgccgagtgggagtcctgc
ttcaacaaggtgcttttccccctgctgactaagctgctcgacaacataagcccagcagat
gtgggcggtatggaggagaccagaatgagagcctgcaccctgctgtctaaggtcttcctg
cagcatctgtctcctctgctctccttgccgacctttgccgccctctgggtcaccatcctg
gacttcatggacaagtacatgcacgccgggtccagcgacttactgctggaggccatcccc
gagtccctgaagaacatgctgctggtgatggacacagccggcatcttccacagcgccgac
tcccggaccggctactccaacctgtgggagatcacctgggagcgcatcgtgtgcttcctg
cctcacctgcgggaggagctcttcaagcagaccatcatacccgatccggtgccaagtcct
ccggcgacgccctcggccggccggccctcgtccccgccggtgtctcagccgccgtccccg
gtgccggtgacccccgcagagacccggacctccagccggccggcgtcccctctggagccc
cagccggggtcggaccgctcgtctccggtgccgccctccgtccccgccgtgccgctgacg
acgccccccgccctgtccccctcgcccttgagccactccccctcgcctttaagccacgcc
cccttcatcctgcagcccctcgcctcccccctgcaggtgggggtcccgcccatgtccctg
ccaatcattctgaaccccgccctcatagaggccacgtcgcccgtgccgctgcttcccggg
cccgggcccacgagcccgtctggcgaggtcaagtaa
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