Clinocottus analis (woolly sculpin): 137779650
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Entry
137779650 CDS
T10471
Symbol
vcpip1
Name
(RefSeq) deubiquitinating protein VCPIP1
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
cana Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cana01002
]
137779650 (vcpip1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cana04121
]
137779650 (vcpip1)
Enzymes [BR:
cana01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
137779650 (vcpip1)
Peptidases and inhibitors [BR:
cana01002
]
Cysteine peptidases
Family C64
137779650 (vcpip1)
Ubiquitin system [BR:
cana04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
137779650 (vcpip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
DUF5817
Motif
Other DBs
NCBI-GeneID:
137779650
NCBI-ProteinID:
XP_068423851
LinkDB
All DBs
Position
Unknown
AA seq
1190 aa
AA seq
DB search
MSLLQSSKKKDKRVLSGSCPDPRCQARLFFPAPHGSSASIECTECGQRHEQRSLVRVEEV
TDPDVVLHNLLRNALLGVTGAPKKGTELVKVMGLSNYHCKLLSPVLTRYGMDKQTGKAKL
LREMNQGEMFDCSLLGDRAFTIEPDRVSAAGYGRDRSGSLTYLHDTLEEVRKANGGGECL
IPVHVDGDGHCLVHAVSRALVGRELFWHALRENLKQNFKQNLDRYKALFQDFIDAAEWED
IINECDPLFVPPEGVPLGLRNIHIFGLANVLHRPIILLDSLSGMRSPGDYSATFLPGLVA
EERCRGKDGALHKPICIAWSSSGRNHYIPLVGIKDAAPPKLPARLLPKAWGVPQELIRKY
VELEPDGGCVIGGDRGLQDKYLLRLVNAMEEVFTERHGIHPSLVADVHQYVYRRTGVIGV
QPEEVTEAAKKSVTENRLHRCLICGALSELHVPPEWLVPGGKLYNLAKTTHGQLRPDKNY
SFPLNNVVCSYDPQRDVLAPDYKLSSLNACNWCHGTSVRHVLGDGAVVYLDGDRTNARSQ
GGKCGCGFKHFWEGKEYDNLPEAFPITLEWAGRVVRETVYWFQYEAAESALNSNVYDVAM
KLVTKHFPGEFGSETLVQKVVNTILHHTAKKNPDEYNPVSVAGAHDRRISDADGAETLPP
VAQPPTKIILTGQKTKTIHKEELTMSRAERGVQRSISEQASVTQRRRTDKLKQDQKVRDQ
KAPGGSPETAASSSSAPATPTKSSTSSSPSSSNQEKKIRVTTSDGRQAMLTLQARTTFSE
LQSRIAGQFGVPAARQCIRHGFPPRELPPPRDGEENEPAALQHGDRVTVEILKAPEDPGG
PAAALGAAGPHGALAASGCPPTMKTEDAVTSGRTSGRELQDSIDLEMSSLCLLATLMGED
VWSYAKKLPHLFLQSGVFYNIVKKDMGLMDGKHCTLPHLTGKTFVYSAAEERLELCVDAA
GHFPVGPDVEELVKEALVQLRSEAAATRGSREGSPSHGALRPGGGGVVRKKEQLQSVAAF
QGKGHSLGGAGGSSPPEQHRPITRQHSSGVDLSASASSRGPPDLPDLSDVPEDAAAAREL
VRVAPGFVTTKDGRGPDPGLMEQQRRKLQEMVSSIQASMERHLREQQSAAAGGGATNESG
ARGQAASTADDDKRPAVAAAGTPDGKREEPEEMDSQDGEQSNATEPMDHS
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgttgcagagctccaagaagaaagacaagcgcgtgctgtccggcagctgcccg
gacccgcggtgtcaggcgcggctgttcttcccggcgcctcacggctcctccgccagcatc
gagtgcacggagtgcggccagcggcacgagcagaggagcctggtgcgcgtggaggaggtg
acggacccggacgtggtgctgcacaacctgctgaggaacgccctgctgggggtcacgggg
gccccgaagaaaggcacggagctggtgaaggtgatgggtctgtccaactaccattgcaag
ctgctgtccccggtgctgacccgctacggcatggacaagcagaccggcaaggccaagctg
ctgcgggagatgaaccagggggagatgttcgactgctccctgctgggggaccgggccttc
accatcgagccggaccgagtctccgccgccggctacggcagggaccggtccggcagcctg
acgtacctgcacgacaccctggaggaggtgaggaaggccaacggcggcggcgagtgcctg
atcccggtccacgtggacggggacgggcactgcctggtgcacgccgtgtcccgggcgctg
gtgggccgggagctgttctggcacgccctgagggagaacctgaagcagaacttcaagcag
aacctggaccgctacaaggccctcttccaggacttcatcgacgcggcggagtgggaggac
atcatcaacgagtgcgaccccctgttcgtgccgccggagggcgtcccgctcggcctgcgc
aacatccacatcttcggcctggccaacgtgctccaccggcccatcatcctgctggactcg
ctgagcggcatgcgcagccccggggactactcggccaccttcctgccgggcctggtggcc
gaggagcggtgccgggggaaggacggcgcgctccacaagcccatctgcatcgcctggagc
agctcgggccggaaccactacatccccctggtggggatcaaggacgcggcgccgcccaag
ctgccggcgcgcctgctgccgaaggcctggggcgtcccgcaggagctcatccgcaagtac
gtggagctggagccggacggcggctgcgtgatcggcggcgaccgcggcctgcaagacaag
tacctgctgcgcctggtgaacgccatggaggaggtgttcacggagcggcacggcatccac
ccgtcgctggtggctgacgtgcaccagtacgtctaccggcgcaccggcgtgatcggggtc
cagcccgaggaggtgactgaggcggccaagaagtcggtgacggagaaccggctgcaccgc
tgcctgatctgcggcgcgctgtccgagctccacgtgccgccagagtggctggtccccggc
gggaagctctacaacctggccaagaccacgcacggccagctgcggccggacaagaactac
agcttccccctcaacaacgtggtctgctcctacgacccccagcgggacgtcctggcgccg
gattacaagctcagctccctcaacgcctgcaactggtgccacggcacgtcggtgcgccac
gtgctcggcgacggggcggtggtctacctggacggggaccggaccaacgcccggtcccag
ggcgggaagtgcgggtgcggcttcaagcacttctgggaggggaaggagtacgacaacctg
cccgaggccttccccatcacgctggagtgggcgggccgcgtggtgagggagacggtgtac
tggttccagtacgaggccgccgagtcggcgctgaacagcaacgtgtacgacgtggccatg
aagctggtgaccaagcactttcccggggagttcggcagcgagacgctggtgcagaaggtg
gtcaacaccatcctgcaccacaccgccaagaagaacccggacgagtacaaccccgtgtcc
gtcgccggggcgcacgaccgccggatctccgacgccgacggcgccgagacgttgccgccc
gtcgcccagccgcccaccaagatcatcctgaccggccagaagacgaagacgatccacaag
gaggagctgacgatgagccgggcggagcgcggcgtccagcggagcatcagcgagcaggcc
tccgtcacccagaggcgccgcaccgacaagctgaagcaggaccagaaggtccgggaccag
aaggcccccggcgggtctccggagaccgccgcctcctcttcctcggctccggccacgccc
accaaatcctccacctcctcgtccccgtcgtcgtccaatcaggagaagaagatccgggtg
accacgagcgacggccgacaggccatgctgaccctgcaggcccgcaccaccttctcggag
ctgcagagccgcatcgccgggcagttcggcgtgccggcggcgcggcagtgcatccgccac
ggcttcccgcccagagagctgccgccgccgagggacggcgaggagaacgagccggcggcg
ctgcagcacggcgaccgcgtgacggtggagatactgaaggcgcccgaggaccccgggggc
cccgccgccgcgctcggggccgcgggcccgcacggcgccctggcggcctccggctgcccc
cccaccatgaagaccgaggacgccgtgacgtccggcaggacgagcggccgcgagctccag
gacagcatcgaccttgagatgtcctccctctgtctcctagcaaccttgatgggtgaggac
gtgtggtcgtacgctaagaagctgccgcacctgttcctgcagagcggcgtcttctacaac
atcgtgaagaaggacatgggcctgatggacggtaagcactgcacgctgccccacctgacg
gggaagaccttcgtgtacagcgctgcagaggagcgcctggagctctgcgtggacgccgcg
ggccacttccccgtcggccccgacgtggaggagctggtgaaggaggcgctggtgcagctg
cgctccgaggcggcggccaccaggggcagcagagagggaagcccctcccacggcgcgctg
cggcccggcggcggcggcgtcgtccgcaagaaggagcagctgcagagcgtcgccgccttc
cagggcaaaggccactcgctgggcggcgccggcggctcctcccctcccgagcagcaccgg
cctatcacgcgccagcacagcagcggcgtggacctgagcgccagcgcgtcgtcccggggc
ccgccggacctgccggacctgtcggacgtccccgaggacgccgccgccgccagggagctg
gtccgcgtggcgccgggcttcgtcaccacgaaggacgggcgcggcccggaccccggcctg
atggagcagcagcgcaggaagctgcaggagatggtctcctccatccaggcctccatggag
cgccacctgcgggagcagcagagcgccgccgcgggcgggggcgcgactaacgagtcggga
gcccgcggccaagcggcgtccacggcagacgacgacaagcgtccggccgtggcggcggcc
ggcacaccggacgggaagagggaggagccggaggagatggacagtcaggacggcgagcag
agcaacgccaccgaacccatggatcactcctga
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