Clinocottus analis (woolly sculpin): 137779679
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Entry
137779679 CDS
T10471
Symbol
pnpt1
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137779679 (pnpt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cana03019
]
137779679 (pnpt1)
03016 Transfer RNA biogenesis [BR:
cana03016
]
137779679 (pnpt1)
Enzymes [BR:
cana01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
137779679 (pnpt1)
Messenger RNA biogenesis [BR:
cana03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
137779679 (pnpt1)
Transfer RNA biogenesis [BR:
cana03016
]
Prokaryotic type
tRNA degradation factors
137779679 (pnpt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
Motif
Other DBs
NCBI-GeneID:
137779679
NCBI-ProteinID:
XP_068423899
LinkDB
All DBs
Position
Unknown
AA seq
768 aa
AA seq
DB search
MRYLLRLGHSFARLHVRLCHKSVYSNHANPRKLAVNLGDKKLEISSGRFARFADGSAVVQ
LGETSVMVTAVSKTKPSPSQFMPLVVDYRQKAAAAGRIPTNHLRRERGNTDDEILTSRLI
DRAIRPLFPHGYFYDTQVLCNLLAVDGVNDPDVLAINAASAALALSDIPWNGPIGAVRVG
MVGGEMLINPTRREMASSILNLIVAGAPSSQVVMIEAAAENVLQQDFCHAVKVGVKHTQQ
IILAIQQMAREQKVTKRTPVKIFSAPADMVEYVRQSASKKIYVVFTDYTYDKISRDEAIN
KVRLETEEDLKERFPQSEHFEIMESFNTVSKEVFRNLVMNEYRRCDGRALTDLRDISCDV
DLFKPLHGSALFQRGQTQVLSSVTFDSLESSIKADIITTALSGIKSKNFMLHYEFPPYAT
NEIGKMGGINRRELGHGALAEKALRPVIPKDFPFTIRVTAEVLESNGSSSMASACAGSLA
LMDAGVPISSAVAGVAVGLISKPIPEKPTELQDYRLLTDILGIEDYLGDMDFKLAGTSKG
ITALQADVKIPGLPLKVVMEAIQQATVAKREILGIMNKCIAKPSEPRKDNGPVIENVRVP
VSRRAHFVGPGGYNLRRLQAQTGVTISQVDEETFSVFAPTPGAMHEAQEFISEVCKDDQE
QQLEFGAIYTATIIEIRDIGVMVKLYPNMSAVLLHNSQLDHKRIKHPSALGLEVGQQIQV
KYYGRDPTDGRMRISRKVLQSPAATVVKTLSEKMSISMGSSNSTGTDL
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgaggtatctactccgactggggcactcgttcgcccgccttcacgtccgtttatgtcac
aagagtgtttacagcaaccacgcgaatccacgaaagctggcagtgaaccttggggacaag
aaacttgagatctcttcgggaaggtttgctagatttgctgatggatctgctgtagtacag
ctgggcgaaacctccgtgatggtgacggctgtgagcaaaaccaaaccttctccgtctcag
ttcatgcctcttgtggtggactacagacagaaagcagcggccgctggtcgaatccccacg
aaccatttgaggcgagagcggggcaacaccgacgacgagatcctcaccagcagactcata
gaccgggcgatcagaccactgttccctcacggctacttttacgacactcaggtcctctgt
aacctgctggcagttgacggtgtcaatgatccagatgtgctggctattaatgcagcttct
gcagctctggccctgtctgacatcccctggaatggacccataggtgctgtgcgcgtgggc
atggtcggtggagagatgctgatcaaccccaccaggagggagatggcgtccagcattctg
aacctcattgtggccggagctcccagcagtcaagtggtgatgattgaggcggcggctgag
aacgtgctgcagcaggacttttgccatgcggtgaaggtgggagtcaaacacacgcagcag
atcatactggccatccagcagatggcgcgagaacagaaggtcactaagcgcaccccggtc
aagatcttctcagccccggctgacatggtggaatatgttcggcagtcagcttccaagaag
atctacgtcgtttttactgattacacttacgataagatttcaagagacgaagcaatcaac
aaagtccgactagaaacggaagaggacctaaaagaacgattccctcagtctgagcacttt
gaaatcatggagtccttcaacaccgtgagcaaagaagtcttccgcaatttagtgatgaac
gagtacaggagatgtgatgggagggcgctgactgatttaagggacatttcatgcgacgtg
gacctctttaaaccgctgcatggctccgctctgttccagagaggacaaacgcaggtgttg
tccagtgtcacatttgattccctggaatccagtatcaaagcagatattatcaccacagct
ttgagtggcatcaaatccaaaaatttcatgcttcattatgagttccctccttatgcgacc
aatgagattggaaagatgggaggcatcaaccggagagagctcggacatggggccctggct
gagaaagctctgaggccagtcattcctaaagacttccctttcactatccgggtcaccgct
gaggtgcttgagtcaaacggatcctcctcaatggcttcagcgtgtgcaggcagcctcgct
ctaatggatgcaggtgttcccatctcttctgctgtggccggcgtagcagttggcctcatc
tccaagcccatcccagagaaacccactgagctccaagactacagattactcactgatata
ctgggaatcgaagattaccttggagacatggacttcaaattggcaggaacaagcaaaggc
atcactgctttacaggctgacgtgaagatcccaggcttgcctctgaaggtggtcatggag
gctatccagcaggccacagtggcaaagagggagatcctgggcatcatgaacaaatgtata
gcaaaacccagcgagccaaggaaagacaatggacccgttattgaaaatgtccgggtgccc
gtttccagacgagcacactttgttggtccgggtggctataatctccgcaggttgcaagct
caaacgggcgtgacaataagtcaagtggacgaggagaccttctctgtgttcgctccaacg
ccaggagccatgcatgaagctcaggagttcatcagtgaagtctgcaaagatgatcaagag
cagcagctggagtttggtgcaatctacactgccaccattatcgagataagggacattggt
gtgatggtgaaactttatcccaacatgagtgccgttctgctgcacaactcgcaactggac
cacaaacggattaaacacccaagtgctttgggtttagaggtgggccagcagatacaggtc
aagtactatggacgggacccaacagacggcagaatgagaatttcgcggaaggtgctccag
tctcctgctgcaaccgttgtcaagactctaagtgagaaaatgagcatctccatgggttca
agcaactccacgggcaccgatttgtga
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