KEGG   Clinocottus analis (woolly sculpin): 137779712
Entry
137779712         CDS       T10471                                 
Symbol
pdlim1
Name
(RefSeq) PDZ and LIM domain protein 1
  KO
K23353  PDZ and LIM domain protein 1/2/3/4
Organism
cana  Clinocottus analis (woolly sculpin)
Pathway
cana04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cana00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    137779712 (pdlim1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:cana04990]
    137779712 (pdlim1)
Domain-containing proteins not elsewhere classified [BR:cana04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   137779712 (pdlim1)
SSDB
Motif
Pfam: DUF4749 PDZ LIM PDZ_6 PDZ_2
Other DBs
NCBI-GeneID: 137779712
NCBI-ProteinID: XP_068423965
LinkDB
Position
Unknown
AA seq 322 aa
MPLRVVVQGPGPWGFRLVGGKDFEQPLTISRVTPGSKAAQANLCIGDMILAIDGEPTENM
THLAAQNKIKGCIEEMVLSVDRSETKMWSPLSTEEGKTHPYKMNLSSEPKEVRHIGSTHN
RSALPFAGFGPKVVTNQYNSPSGLYSSENIKDFNSVVDEVKTIAAANEPNNKAPSDPSQA
GKLPPVVANSEVYKMLQENQESDEPPRQSASFKVLQEILETGDPDKPSGFRSVKAPASKM
GSSVGNTDKLPSCDKCGSGIVGLVVKLRDKFRHPECYTCTDCDVNLKQKGHFFVEEQIYC
EKHARERMTPPEGYDVVTVFPK
NT seq 969 nt   +upstreamnt  +downstreamnt
atgcctctgcgggtggtagtgcagggccctgggccatggggcttcaggctggtcggggga
aaggacttcgagcagccgctgactatttcccgggtcacccccgggagcaaagcggctcag
gccaacctgtgtatcggagacatgatcttggctatcgacggagaaccgacagagaacatg
actcacttggcggcgcagaacaagatcaaggggtgcatagaggagatggtgctctctgtc
gacaggtcagaaactaaaatgtggtcaccgctttcaactgaggaagggaagacacatccg
tacaagatgaatctttcatcggaaccaaaggaagtgagacacataggctccacccacaac
aggagcgctctccccttcgctgggttcggccccaaagtcgtgaccaaccagtacaacagt
ccctccggcctctactcctcagagaacatcaaggacttcaactcagtcgtggacgaagtc
aaaaccatcgccgccgctaacgagcccaacaacaaagctccatcagatccatcgcaagcg
ggcaagctgccgcccgtcgtagccaattctgaggtttacaagatgcttcaggagaaccag
gagtccgatgagcctccgcgccagtcggcttcattcaaagtgcttcaggagatccttgag
acgggtgacccggataaaccgtcagggttcaggagtgtgaaagcacccgcctcgaagatg
ggctcatcggtggggaacacggacaagttgccctcctgtgacaaatgtggatccgggatt
gtggggctggtggtgaagctgagggacaagttccgccacccggagtgctacacctgcaca
gactgcgacgtcaacctcaaacagaagggacatttctttgtggaggagcaaatttattgc
gagaagcacgctcgcgagcgaatgactcccccagagggctacgacgtggtcactgtcttc
cccaagtag

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