KEGG   Clinocottus analis (woolly sculpin): 137779881
Entry
137779881         CDS       T10471                                 
Symbol
xpo1b
Name
(RefSeq) exportin-1 isoform X1
  KO
K14290  exportin-1
Organism
cana  Clinocottus analis (woolly sculpin)
Pathway
cana03008  Ribosome biogenesis in eukaryotes
cana03013  Nucleocytoplasmic transport
cana03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cana00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    137779881 (xpo1b)
   03008 Ribosome biogenesis in eukaryotes
    137779881 (xpo1b)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    137779881 (xpo1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cana03019]
    137779881 (xpo1b)
   03009 Ribosome biogenesis [BR:cana03009]
    137779881 (xpo1b)
   03016 Transfer RNA biogenesis [BR:cana03016]
    137779881 (xpo1b)
   03036 Chromosome and associated proteins [BR:cana03036]
    137779881 (xpo1b)
Messenger RNA biogenesis [BR:cana03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     137779881 (xpo1b)
Ribosome biogenesis [BR:cana03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    137779881 (xpo1b)
  Pre-60S particles
    137779881 (xpo1b)
Transfer RNA biogenesis [BR:cana03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    137779881 (xpo1b)
Chromosome and associated proteins [BR:cana03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     137779881 (xpo1b)
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat IBN_N mTOR_dom TPR_TNPO3_IPO13_2nd Hydrolase_3 BspA_v
Other DBs
NCBI-GeneID: 137779881
NCBI-ProteinID: XP_068424207
LinkDB
Position
Unknown
AA seq 1071 aa
MPAIMTMLADHAAQQLLDFNQKLDINLLDNVVNCLYHGVGPQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDASNV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVSQYEEQFVTLFTLTMCQLKQMLPL
NTNIRLAYANGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGNQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFI
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPL
LDAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITSEIPQIFDAVFECTLNMINKNFEE
FPEHRTHFFYLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKITT
VLNPSSATNNQGFIQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLV
QIKEFAGEDTSDLFLEEREASLRQAQEEKHKIQMSVPGILNPHEIPEEMCD
NT seq 3216 nt   +upstreamnt  +downstreamnt
atgccagcaattatgacaatgttagcagaccatgcagcacagcagctgctggacttcaac
cagaaattggatatcaacctgctggataatgtggtgaactgtctatatcatggggtggga
ccacagcaaagaatggcacaagaagtgttgacacacttaaaagagcacccggatgcctgg
acaagagtggacaccatcctcgagttttcccagaacatgaacaccaaatactatgctctt
cagattctggaaacggttatcaaaacaagatggaagattctccccaggaatcagtgtgaa
ggtataaaaaagtatgttgtcggcctcattatcaagacttcatcagatgcatcaaatgtg
gagaaagaaaaggtgtacatcgggaagctgaacatgatccttgttcagatcctgaagcag
gagtggcccaagcactggcccaccttcatcagtgacatcgtcggggcaagtcgcaccagt
gagagcctttgtcagaacaacatgatcattctgaagctgctcagcgaggaggtcttcgat
ttctcgagtggccagatgacccaggtcaaggccaagcacctaaaggacagcatgtgcaat
gaattctcccagatattccagctctgccagttcgtcatggaaaactcccagaacgccccc
ctggttcacgctactctggagaccctcctacgttttctcaactggattcctctggggtat
atctttgaaaccaaactgatcagcacattggtgtataagttcttgaacgtacccatgttc
cgtaatgtgacactgaagtgcctcaccgagatcgccggtgtgagcgtcagccagtacgag
gagcagttcgtcacgctcttcaccctgaccatgtgtcaactcaagcagatgctgcccctg
aacaccaacatccggctggcctacgccaacgggaaggacgatgaacagaacttcatccag
aacctcagtctgttcctctgcactttcctcaaagagcacgggcagctcattgagaagcgg
ctcaacctcagagaaacattaatggaggccctccactacatgctgctcgtgtctgaggtg
gaggagacggagatcttcaaaatttgtctggagtattggaaccacttggctgctgagctc
tacagagagagtcccttctctacgtctacgtccccgctgctctccggcaaccagcacttt
gacgttccaccacgcagacagctctacctccccgtactctccaaggtgcgtctgctcatg
gtgagtcggatggccaagccggaggaggtgctggtagtggaaaatgaccagggagaggtt
gtcagagagttcatgaaggacaccgattccatcaatctttacaagaacatgcgggaaacc
ctcgtgtacctgactcacttggactacgcagacacggaacgaataatgacggaaaagctt
cacaaccaggtgaacggcaccgagtggtcctggaaaaacctcaacacgttgtgctgggcc
attggctccatcagcggggccatgcacgaggaggacgagaagaggttcctggtcactgtc
atcaaggatctgctgggtctgtgcgagcagaagagagggaaggataacaaggccatcata
gcttccaacatcatgtacattgtcggccagtatccacgctttctcagagcccactggaag
ttcctcaaaacagtcgtcaacaaactctttgagttcatgcatgaaacccacgacggtgtt
caggacatggcctgtgacacgttcatcaagattgcccagaagtgccgccgccacttcatc
caggtgcaggtgggagaggtgatgcccttcatcgacgagatcctcaacaacatcaacacc
atcatctgtgaccttcaacctcagcaggtgcacacgttctatgaggcagtgggttacatg
attggcgcccagacagatcaggctgttcaagagcacctgatagaaaaatacatgctgctg
cctaaccaagtgtgggacagcatcattcagcaggctaccaaaaacgtggacatcttgaag
gacccggagacggtgaaacagctgggcagcatcctgaagaccaacgtccgagcctgcaag
gctgtgggacacccctttgtcatccagctggggcggatttatcttgacatgctcaacgtc
tacaagtgcctcagcgagaacatctctgctgccattcagacaaatggtgagatggtgacg
aagcagcccctgatccggagtatgcgaacggtgaaacgtgagacactaaaactgatctca
ggctgggtcagccgatcaaacgacccacagatggtcggggagaactttgttccgccgctg
ctggacgccgtcctcattgactatcaacgcaacgtccccgctgcccgcgagccagaggtc
ctcagcaccatggcgaccatcgtcaataagctggggggacacatcaccagcgagataccc
cagatctttgatgccgtcttcgagtgcaccctaaacatgatcaacaagaactttgaggag
ttcccagagcacaggacacacttcttctacttactgcaggcggtgaactctcactgcttc
cccgcattcctcgccatcccccctgcccagttcaagctggtgctggactccatcatctgg
gccttcaaacacactatgaggaacgtggctgatactggtctgcagattctgtacacgctg
ctgcagaatgtggcccaggaggaagcagccgcgcagagtttctaccagacatacttctgc
gatatcttacaacacatcttctctgtggtcaccgacacgtcgcatactgctggcctgacg
atgcacgcgtccatcctggcctacatgttcaacctggtggaggaggggaagatcaccacg
gtgctgaacccttctagcgccaccaacaaccagggcttcatccaggagtacgtggccaac
ctgctcaagaccgctttccctcacctacaagatgcccaggtgaaggtgtttgtgaccggg
ctgttcagcttaaaccaggatattcctgccttcaaggagcaccttagggatttcctcgtc
caaataaaggagtttgccggcgaggacacctcagacctgttcctggaggagagggaggcg
tcgcttcgtcaggcccaggaagagaaacacaagatccagatgtccgtcccaggcatcctc
aacccgcacgagatccccgaggagatgtgtgactga

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