Clinocottus analis (woolly sculpin): 137779881
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Entry
137779881 CDS
T10471
Symbol
xpo1b
Name
(RefSeq) exportin-1 isoform X1
KO
K14290
exportin-1
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03008
Ribosome biogenesis in eukaryotes
cana03013
Nucleocytoplasmic transport
cana03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
137779881 (xpo1b)
03008 Ribosome biogenesis in eukaryotes
137779881 (xpo1b)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
137779881 (xpo1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cana03019
]
137779881 (xpo1b)
03009 Ribosome biogenesis [BR:
cana03009
]
137779881 (xpo1b)
03016 Transfer RNA biogenesis [BR:
cana03016
]
137779881 (xpo1b)
03036 Chromosome and associated proteins [BR:
cana03036
]
137779881 (xpo1b)
Messenger RNA biogenesis [BR:
cana03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
137779881 (xpo1b)
Ribosome biogenesis [BR:
cana03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
137779881 (xpo1b)
Pre-60S particles
137779881 (xpo1b)
Transfer RNA biogenesis [BR:
cana03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
137779881 (xpo1b)
Chromosome and associated proteins [BR:
cana03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
137779881 (xpo1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
mTOR_dom
TPR_TNPO3_IPO13_2nd
Hydrolase_3
BspA_v
Motif
Other DBs
NCBI-GeneID:
137779881
NCBI-ProteinID:
XP_068424207
LinkDB
All DBs
Position
Unknown
AA seq
1071 aa
AA seq
DB search
MPAIMTMLADHAAQQLLDFNQKLDINLLDNVVNCLYHGVGPQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDASNV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVSQYEEQFVTLFTLTMCQLKQMLPL
NTNIRLAYANGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGNQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFI
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPL
LDAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITSEIPQIFDAVFECTLNMINKNFEE
FPEHRTHFFYLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKITT
VLNPSSATNNQGFIQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLV
QIKEFAGEDTSDLFLEEREASLRQAQEEKHKIQMSVPGILNPHEIPEEMCD
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaattatgacaatgttagcagaccatgcagcacagcagctgctggacttcaac
cagaaattggatatcaacctgctggataatgtggtgaactgtctatatcatggggtggga
ccacagcaaagaatggcacaagaagtgttgacacacttaaaagagcacccggatgcctgg
acaagagtggacaccatcctcgagttttcccagaacatgaacaccaaatactatgctctt
cagattctggaaacggttatcaaaacaagatggaagattctccccaggaatcagtgtgaa
ggtataaaaaagtatgttgtcggcctcattatcaagacttcatcagatgcatcaaatgtg
gagaaagaaaaggtgtacatcgggaagctgaacatgatccttgttcagatcctgaagcag
gagtggcccaagcactggcccaccttcatcagtgacatcgtcggggcaagtcgcaccagt
gagagcctttgtcagaacaacatgatcattctgaagctgctcagcgaggaggtcttcgat
ttctcgagtggccagatgacccaggtcaaggccaagcacctaaaggacagcatgtgcaat
gaattctcccagatattccagctctgccagttcgtcatggaaaactcccagaacgccccc
ctggttcacgctactctggagaccctcctacgttttctcaactggattcctctggggtat
atctttgaaaccaaactgatcagcacattggtgtataagttcttgaacgtacccatgttc
cgtaatgtgacactgaagtgcctcaccgagatcgccggtgtgagcgtcagccagtacgag
gagcagttcgtcacgctcttcaccctgaccatgtgtcaactcaagcagatgctgcccctg
aacaccaacatccggctggcctacgccaacgggaaggacgatgaacagaacttcatccag
aacctcagtctgttcctctgcactttcctcaaagagcacgggcagctcattgagaagcgg
ctcaacctcagagaaacattaatggaggccctccactacatgctgctcgtgtctgaggtg
gaggagacggagatcttcaaaatttgtctggagtattggaaccacttggctgctgagctc
tacagagagagtcccttctctacgtctacgtccccgctgctctccggcaaccagcacttt
gacgttccaccacgcagacagctctacctccccgtactctccaaggtgcgtctgctcatg
gtgagtcggatggccaagccggaggaggtgctggtagtggaaaatgaccagggagaggtt
gtcagagagttcatgaaggacaccgattccatcaatctttacaagaacatgcgggaaacc
ctcgtgtacctgactcacttggactacgcagacacggaacgaataatgacggaaaagctt
cacaaccaggtgaacggcaccgagtggtcctggaaaaacctcaacacgttgtgctgggcc
attggctccatcagcggggccatgcacgaggaggacgagaagaggttcctggtcactgtc
atcaaggatctgctgggtctgtgcgagcagaagagagggaaggataacaaggccatcata
gcttccaacatcatgtacattgtcggccagtatccacgctttctcagagcccactggaag
ttcctcaaaacagtcgtcaacaaactctttgagttcatgcatgaaacccacgacggtgtt
caggacatggcctgtgacacgttcatcaagattgcccagaagtgccgccgccacttcatc
caggtgcaggtgggagaggtgatgcccttcatcgacgagatcctcaacaacatcaacacc
atcatctgtgaccttcaacctcagcaggtgcacacgttctatgaggcagtgggttacatg
attggcgcccagacagatcaggctgttcaagagcacctgatagaaaaatacatgctgctg
cctaaccaagtgtgggacagcatcattcagcaggctaccaaaaacgtggacatcttgaag
gacccggagacggtgaaacagctgggcagcatcctgaagaccaacgtccgagcctgcaag
gctgtgggacacccctttgtcatccagctggggcggatttatcttgacatgctcaacgtc
tacaagtgcctcagcgagaacatctctgctgccattcagacaaatggtgagatggtgacg
aagcagcccctgatccggagtatgcgaacggtgaaacgtgagacactaaaactgatctca
ggctgggtcagccgatcaaacgacccacagatggtcggggagaactttgttccgccgctg
ctggacgccgtcctcattgactatcaacgcaacgtccccgctgcccgcgagccagaggtc
ctcagcaccatggcgaccatcgtcaataagctggggggacacatcaccagcgagataccc
cagatctttgatgccgtcttcgagtgcaccctaaacatgatcaacaagaactttgaggag
ttcccagagcacaggacacacttcttctacttactgcaggcggtgaactctcactgcttc
cccgcattcctcgccatcccccctgcccagttcaagctggtgctggactccatcatctgg
gccttcaaacacactatgaggaacgtggctgatactggtctgcagattctgtacacgctg
ctgcagaatgtggcccaggaggaagcagccgcgcagagtttctaccagacatacttctgc
gatatcttacaacacatcttctctgtggtcaccgacacgtcgcatactgctggcctgacg
atgcacgcgtccatcctggcctacatgttcaacctggtggaggaggggaagatcaccacg
gtgctgaacccttctagcgccaccaacaaccagggcttcatccaggagtacgtggccaac
ctgctcaagaccgctttccctcacctacaagatgcccaggtgaaggtgtttgtgaccggg
ctgttcagcttaaaccaggatattcctgccttcaaggagcaccttagggatttcctcgtc
caaataaaggagtttgccggcgaggacacctcagacctgttcctggaggagagggaggcg
tcgcttcgtcaggcccaggaagagaaacacaagatccagatgtccgtcccaggcatcctc
aacccgcacgagatccccgaggagatgtgtgactga
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integrated database retrieval system