KEGG   Clinocottus analis (woolly sculpin): 137780260
Entry
137780260         CDS       T10471                                 
Symbol
col13a1
Name
(RefSeq) collagen alpha-1(XIII) chain
  KO
K16617  collagen type XIII alpha
Organism
cana  Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:cana00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:cana00536]
    137780260 (col13a1)
Glycosaminoglycan binding proteins [BR:cana00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   137780260 (col13a1)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 137780260
NCBI-ProteinID: XP_068424827
LinkDB
Position
Unknown
AA seq 590 aa
MGIPGRMGLKGHAGEKGAPGEPGLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKSGQNGPK
GDMGQRGVKGVPGEPGPRGEKGVCGDYTHRMLPITVRNMPSISPLILKRLKQGEPGAQGP
PGPPGPPGLPGTTGLNGASGPMGKPGEPGKPGKDPRLLPGLKGEPGAPGQKGDQGDVGPL
GPEGSKGVNGEQGIKGDEGKRGFPGNRGEKGESGFPGASGFKGQPGLPGIPGIPGKRGYR
GERGEPSVAAQGIKGEPGSPGPPGLMGIKGDAGGDGEKGEAGQEGPAGPRGPPGPTGEPG
KAEIHNNENDIRNIPMMGPPGLPGPSGTPGLHGTKGDVGLPGPPGLDGDKGPRGKPGDHG
PAGPAGPEGPRGEPGVMGFSGPKGDKGDTGPSGSPGLDGPTGENGPPGAPGPIGLPGSMG
PKGEAGQGGRSEMIYGPPGPTGPSGPVGPAGSQGFAGPKGEPGIGVRGEKGASGHKGDKG
DRGHLGLPGAHGLDGRPGPVGLIGPAGVSGPAGPKGERAEKGDAGLPGPTGPQGIPGLVG
PQGLKGNRGERGKKGNRGTKGDKGDQGAPGLDAPCPLGDDGLPVPGCWNK
NT seq 1773 nt   +upstreamnt  +downstreamnt
atggggattcctgggagaatgggcttaaaaggacacgcaggggagaagggagccccaggc
gagccaggtctgtctatcattggtccaagaggccctccgggacaacccgggacgagagga
tttccaggcttcccaggtccaattgggttggatggcaagtctggacagaacggaccgaag
ggagacatgggtcagcgtggcgttaaaggagtcccaggggagcctggacccagaggggag
aagggcgtatgtggagactacacacaccggatgttgcccatcaccgtacgcaacatgccc
tcaataagccctctaatcctaaaacgcctcaagcagggtgagcctggagcgcagggaccc
ccgggaccgccaggaccccccggtctcccaggaaccacagggctgaacggagccagtggc
ccaatgggtaagcccggtgaaccaggaaaaccaggaaaagacccgcggcttttaccagga
ctaaagggggagccgggtgcgccgggacaaaagggggatcaaggggacgtcggcccactc
ggccctgaaggctcaaagggagttaacggagaacaaggaattaagggagacgaaggaaag
aggggtttcccaggaaacaggggagagaagggggagtcaggtttccccggcgcttctggg
ttcaagggccagcctggccttcccggtatcccgggcatcccgggcaagaggggctacagg
ggtgagcggggagaaccgagcgttgcagcccaggggattaaaggagaaccaggttcccca
ggaccgccgggcctcatgggaatcaagggggacgcaggtggtgatggagagaagggggaa
gccggtcaggaaggcccagctggaccacgaggtcctccaggcccaaccggagagccagga
aaggctgaaatccacaacaatgaaaacgatatccgcaacataccgatgatgggcccccct
ggattacctggaccttcagggacccctggcctccacggtaccaagggtgatgttggtctg
ccaggccctccaggactggacggagacaaggggcccagggggaagcccggagaccacggc
cccgcgggcccagccggccctgaaggccccagaggggagcctggtgtcatgggcttctct
ggacccaaaggggacaagggagacacgggtccatctggatcacctggtttagacgggcct
acgggtgaaaacgggcccccaggggcccctggccctattggattacccggctcaatgggt
cctaaaggggaggccggacaggggggaaggtcggaaatgatttatggacctccagggccc
accggaccttcaggaccagtcggccccgccggatctcaaggctttgcggggcctaaggga
gaacccggcatcggcgtgagaggagagaagggagcgtcgggtcacaagggcgacaagggc
gacagaggccatcttggacttcctggggctcatgggttagacggccgaccgggtccagtg
ggtctcataggaccagcaggtgtgtcggggccagcaggaccaaaaggggagcgagctgag
aagggagatgcaggactaccaggacccactgggcctcaaggcatccctggtttagttgga
ccacaaggactcaaagggaaccggggagagaggggcaagaaaggcaacagggggaccaaa
ggggataagggagaccaaggagcacctggattagatgccccctgtccgttgggagacgac
ggcttaccggttcccggctgttggaataaatga

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