Clinocottus analis (woolly sculpin): 137780278 Help Entry 137780278         CDS       T10471                                  Symbol col17a1b Name (RefSeq) collagen alpha-1(XVII) chain   KO K07603   collagen type XVII alpha Organism cana  Clinocottus analis (woolly sculpin) Pathway cana04382   Cornified envelope formation Brite KEGG Orthology (KO) [BR:cana00001]  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     137780278 (col17a1b) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen Motif Other DBs NCBI-GeneID:  137780278 NCBI-ProteinID:  XP_068424859 LinkDB All DBs Position Unknown AA seq 1836 aa AA seqDB search MDELTRQMDFSGGLSEEKVVRETVISTSRLTSLPPKGTSGSNHRNMSSSAGGLGLEKNVL TQNSGGTYFSSSSVGVNTSSFSSSSGVYLGGDSSGGDGGGIFIDGGGYGSAGGGGGGGGG GGGGGGGGGSYLVSSVSKVRSSSSGGARRAQTAGSAGGLSPVFRERKNISSRSGGYDGSS SGNSSPEFTRKDYGIYCTSGTRGRSESRESQIRARLQSASPSASRWTELDDVKKLLKGRS CSVSPTRSSSASTTLPVPKKASVETKTVSVASQSGSTSFGSGVRSAGFQTIDTSGLYDTG LTSGLFDSGVKSGHYDITLKSSQYDTGVKSGQYDVGLKSGQYDTGVRSVQYDTGVRSAQY DTGVRSAQYDTGVRSAQYDTGVRSAQYDTAVRSGQYDTLDATLPTFSWSTSTLPSASTTV IAGNTSSYASQPGNNNMSGGTSPLGLTSPSSLSVYGFQNNLAPTSPTVLTTSGGNVNSSV GGYGVQKNSSNGGGFIGTGVSSTTRSQSDDSYKKDYKFLISEKENVPAKRDAEMLIMAKD SGKQFSSSSVQMGGSISGDSMKKEKLISSYTETMPLKSETGNSYYGSSGVVMKDKATYAE IHKESDIFGGGGGLCCCSDACCSWWKWLLGLLLLSLLLLGLLFGLIALAEDVRKLKNRVA TLEAESSVASSHTSRLSGSSNDLNFYGAAGAGGGTGAGAVAGAGAGTGAVAGVGGGGGTG ARAGAGAGVGGTAHTDNTLHLGVGGGGGGGSSSKTRHGVAAGAGGSGGAGNGVDIIVGDS GPIATGSGAGGGAGTSLSGTAGSTGTSSSGSVGRRVSTGTVLSGSAGGSSGDTGFGTGVS GGQIDVASLQTTIQRMLRTEMQSQSYRAFLVSSVQGERGLPGPKGDSGTKGDSGFPGLPG AMGHPGPEGQKGQKGNLGDHGVDGAPGIRGREGPSGPRGEAGPSGFASKGEKGATGDAGP AGAPGIPGLSGAPGLQGFRGEAGIPGPKGDRGLGGINGLKGEHGDTGLKGAKGDSGLPGL QGSAGERGPKGSMGLSGVDGLKGSRGDQGSAGPPGLRGPPGDYAVSGTHGLQGPPGIPGN PGRPGAKGDTGEPGRIINAGGSSSFAIPGPPGPSGPPGSAGPPGLSGPIGPAGLPGQPGV KGDRGYRGEQGEPGITVRTSESLSSRQFSSSASGGSGQPGPPGPPGQPGRPGDSRQGPPG PSGPPGPPGYGRPGPKGDRGDAGFASSSGSLYPGPPGPPGPAGPFGPKGSAGAPGPRGYQ GEPGQPGVPGTPGRGSSERVSSYAVGNAIPGPPGPPGVPGLRGPQGYKGDTGAPGVSGSS GGSISVTSGPPGPAGPPGPQGLPGSFASSSEMRQYINDYLSRSRHSNAPGPPGPPGLPGL PGTFSGSIDDIATRVIAYLQRSGSGFSIGVQGPPGPPGPPGSGSGSGSLTVSGLIIMLQR EDVRRYLTGPPGPQGPQGPPGLSGGLSGSYSVEEIATYVFKTMNDRGIARGPPGPPGPAG PSGAGGSGFTTATIDYSALMRNTDFRSWINSAVQHGPPGPPGSPGVPGQPGAPGPQGPRG VSTATVYGSEGRGYSLEDIQRYLQGSSFRGLPGPPGPQGPPGLQGPSGSYRESISYNGNS HQESIRAEVQQYLSSDGVRRAIIGPPGPEGPRGQKGDRGEPGYIQSYAQSQSYSQGDSRY GSERRDIDISKLTESLDYSSVASKVTDYIKNQGLLQEYLVEGPQRANVRVVQGLPGPPGP VGPAGQSRVIGSYGNVTADLMEFFRTYGTIPGPPGGPGSRGEQGHPGPRGEKGDPGRPGL PGIPGSYSVQIPHRVQKRDAGEKVVGRRHRRHAHGG NT seq 5511 nt NT seq  +upstreamnt  +downstreamnt atggacgagttaacgagacagatggacttctcaggaggcttgtcagaagaaaaggttgtg cgagaaactgtaatctccacgtccagactgacttctctaccaccaaagggaaccagcgga tcaaatcacaggaatatgtccagcagtgctggtgggctgggcttggagaagaatgtctta acccagaacagcggtggaacttatttttcttcatcttctgtaggtgtgaacaccagcagc ttcagctcctcctcaggagtttacctcggtggcgactcctcaggaggcgatggagggggg atcttcattgacggaggggggtatggaagtgcaggaggaggaggcgggggaggaggcgga ggaggtggaggcggaggtgggggcggcagttatctcgtgagctcggtgtcaaaggtcagg tccagctcgtcgggtggtgccaggagagcgcagactgctggctcagcaggaggtctgtct ccagtcttccgggagaggaagaacatatccagccgctcaggaggttatgacggaagttca agtggcaattcctctccagagttcacgcgcaaagattatggaatctattgcaccagcggc acaagagggaggagcgaaagcagagagagccagatcagagccagattgcaaagtgcctct ccttctgccagcagatggacggagttggatgacgtgaagaagctgctgaagggacgctcc tgcagcgtcagccccactcgctcctccagtgcctccaccaccctgcctgtccctaaaaag gccagcgtggaaaccaagactgtctccgtggcctcccagtcgggttccacttcatttggc tctggtgtgagatcagctgggttccaaaccattgacacatcgggcctttatgataccggc ctgacatctgggctgtttgatagtggtgtaaaatcaggccattatgatatcactctgaaa tcaagccaatatgatactggtgtcaaatcaggccagtacgatgttggtctgaaatcaggc cagtatgacactggtgtacgatcagtccagtacgacactggtgtacgatcagcccagtac gacactggtgtacgatcagcccagtacgacactggtgtaagatcagcccagtacgacact ggtgtaagatccgcccagtacgatacagctgtgagatcaggtcagtatgacacgctggat gctacacttcctactttctcttggtccacctcgaccctgccctccgcctccaccacggtg atcgctggcaacaccagcagctacgcgtcccagcccggcaacaacaacatgtcgggggga acgtcgccgctcggcctcacctccccctcgtccctgtcagtttacggcttccagaataat ctggctcccacttctcccactgtgctcaccacgagtggaggcaacgtaaactcttccgtt ggaggttatggcgtccagaagaactcgtcaaatggtgggggtttcatcggcactggagtc tcttcaaccactcgatcccaaagtgatgattcatataagaaagactacaagttcttgatc tctgaaaaggagaacgttccagccaagagggatgcagaaatgctaattatggctaaagac agcgggaagcagttctccagcagcagcgttcagatgggagggtctatatcaggagattca atgaagaaagagaagctcatttcaagctacactgagacaatgccactgaagtcagagaca ggcaactcttactatggatcatctggagttgtaatgaaagacaaagccacctatgcagag attcacaaagaaagcgacatcttcggaggaggtggaggcctgtgctgctgctccgacgct tgttgctcttggtggaaatggctgctgggtcttctcctcctctccctgctcctgcttgga ctcttgttcgggctcattgcactggccgaagacgtgagaaagctgaagaatcgagtggct acgctggaggccgagtcctcggtggcttcttctcataccagccggctgtcaggttcttcc aatgacctcaatttctatggggccgctggagctggaggaggaactggtgctggagctgta gctggagctggagctggaactggtgctgtagctggagttggaggtggaggtggaactgga gctagagctggagctggagctggagttggaggtaccgctcacactgacaacacgctgcac cttggcgttggaggtggtggtggtggaggctcgagctccaaaacacgacacggggttgca gccggtgctggcggcagcggcggagctggaaatggagttgacatcatcgttggcgacagt gggcctatagcaaccgggtccggtgctggtggaggagccggtaccagcctcagcggcacc gccggcagtaccggtactagttcaagtggcagtgtcggcagaagagtcagtactggtacc gttttaagtggcagcgctggtggctccagtggtgacactggcttcgggaccggagtgagc ggaggacaaatagacgttgcttctctccagacaacgatccagcggatgttaagaactgaa atgcagtcacagtcatacagagcttttctagtatcgtcagtgcagggcgagagaggactg cctggacctaaaggggactctggaactaaaggagattctggtttccctggacttccaggt gcaatgggacatccaggccctgaaggtcaaaaaggacagaaaggaaacctaggtgatcac ggggtggatggtgcaccaggcatcaggggccgcgagggcccgtctggccccagaggtgag gcaggaccttcaggctttgcatcgaaaggtgaaaagggtgccactggggacgctggcccg gctggtgcacctggaattcccggactttctggagcaccaggtcttcagggtttccgtggc gaggcagggatacctgggcctaaaggcgacagagggctgggtggaatcaatggacttaaa ggtgaacatggtgacacaggtctcaaaggtgcgaaaggtgattctggtctaccagggctg caggggtcagcaggagagagaggacctaaagggtcaatgggattgtctggagttgatgga ttgaaaggatcaagaggtgaccagggatctgctgggccacctggactcagaggtcctcct ggagattatgctgtttcaggaacccatgggcttcaaggaccaccaggaataccagggaat ccaggaagacccggcgctaaaggtgacacaggtgaaccaggaagaatcatcaacgcaggt ggctcctcatctttcgccatcccaggaccacccgggccttctggtcctcccggttctgca ggtcctccaggattatcaggtcccattggtcctgctggtctgcctggacaacctggcgtt aaaggcgacagagggtatagaggtgagcagggagaaccaggaataacagtgagaacatct gaaagtctcagctcaaggcagttcagttccagtgccagtggaggttcaggacaacccggc ccacctggcccaccgggtcaacctggacgtccaggagattcaagacaaggacctccaggg ccatctgggcctccaggtcctccaggttatggaagaccaggaccgaaaggagacagagga gacgcaggctttgcatccagctctggatctctctatcccggaccaccgggaccgccggga ccagctgggccttttgggcccaaaggatcagcaggtgctcccggaccaagaggttaccaa ggtgaaccaggccagccaggtgtgccgggtaccccaggacgaggaagctccgagagagtg tcgtcttacgccgttggaaacgccatccctggaccgccgggtccaccgggagtccctgga cttcgtggaccccaaggttataaaggggacactggagctcctggtgtttctggctcttca ggaggctccatctctgtcacctcgggccctccaggccctgcaggtcctcctggccctcaa ggcctgccgggctccttcgcttcttccagtgagatgcgtcaatacatcaatgactatcta agtagaagcagacactctaatgcccccggaccgccaggtccacctgggctcccaggactc cccggaaccttctcgggctctatcgatgacatcgccactcgtgtcattgcatacctgcaa cgttctggctcaggcttcagcattggtgttcagggtccaccaggaccacctggtccacct ggctctggctctggctctgggtccttgacagtcagcggtctcatcattatgcttcagaga gaagatgtgaggaggtatttgacaggaccaccagggccacaagggccacagggaccacca ggcctatcaggcgggctttcaggcagttacagtgttgaggagatcgccacatacgtcttc aaaaccatgaatgacagagggatcgcgagaggtccgcccggcccacctggtcctgctggg ccttctggtgcgggaggttctggcttcactaccgctacgattgactattctgcactgatg agaaatacagacttccgctcttggattaactcggccgtacaacacggtcctcctggtcct cccggttctcccggtgtcccggggcaacctggtgctcctggtcctcaggggccgagagga gtctccactgccactgtgtatgggtcagaaggtcgtggctacagcttggaggatattcag cgttacctgcagggttccagtttcagaggtcttcctggccctcctggtcctcaaggtcct ccgggactacagggtccatcaggcagctacagagaatcaatttcctacaatggaaactcc catcaggagagtattcgcgctgaagttcaacaatatctatccagtgacggtgttcggcgc gcaatcattggacccccggggcctgagggaccgaggggtcaaaagggagatcgtggagag ccgggttacatccagagctacgcgcagagccaaagctactctcagggtgactctcgatac ggctcagagcgcagagacatcgatatcagcaagctcaccgagtcattggactactccagc gtcgcctcaaaggttacagactacatcaagaatcaaggcctgctgcaggagtatctggtt gagggtcctcagagggccaatgtgagagtggttcaaggcctccctggtccacctggcccc gtcggacctgctggtcagagccgcgtcatcggttcatatggcaacgtcacagctgacctc atggagttcttcagaacgtacggcaccatccctggccctccaggaggccctggatcaagg ggtgagcaagggcacccaggacccagaggagaaaagggcgatcccgggcgcccaggttta ccgggaatacccgggtcctactctgtccagattccacacagagtgcagaagagggatgca ggagaaaaagttgttggtcgtcgccatcgccgtcacgcccacggtggctaa

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