Clinocottus analis (woolly sculpin): 137780748
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Entry
137780748 CDS
T10471
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2D isoform X1
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04020
Calcium signaling pathway
cana04080
Neuroactive ligand-receptor interaction
cana04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
137780748
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
137780748
04082 Neuroactive ligand signaling
137780748
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cana04040
]
137780748
Ion channels [BR:
cana04040
]
Ligand-gated channels
Glutamate (ionotropic)
137780748
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
137780748
NCBI-ProteinID:
XP_068425043
LinkDB
All DBs
Position
Unknown
AA seq
2039 aa
AA seq
DB search
MYIYIYIFRYIYFPSVSVCVRVWWRRRWGGGHPQNGYLKKEGCEKGWRDAGKEGGKAGEK
QHPLLVRYIAASPPRQVAMVAIPTLSLLLVLAEWAGLVDCSPHLLLRPSPRERDAGAMMN
FNIAVIHAGATVQAEAAVAGPGGRVLYPGFGRVYGSLGESVVTQWGSANVIWLQVNDSSP
KTVLSQLCELLAARPLQGLVYEEERPPRTAWGPLAPMLEFVSAQTGLPIVAVGGGAGLGR
MPQESGSIFLQFSSSTALQLEVIFEVLEEYDWTSFSVVCTRHHGYQDFLSVVEGLTDGSF
IGWEKKSVVILNVTDDPAGARTRRLLKENEAQVRLLYCSQEEAELVFRAAWAAGQAGASH
MWFAVGPALSGLSMESLPRAVFAVRPQGWRDEPRRRIARGVSVLTHGAVAMRKDYGTTGG
PNFVTNCMTDANQTQRLRGRMRYFGNITLGGRDYSFNGDGYLSNPFLDVISWTPGRGWED
VGWWENGVLRLRYPAWSRYGPFLKPPDDAQHLRVVTLEERPFVIVELADAASGTCIRDSV
PCRRPLNASAIHEGVAPMKQCCKGFCIDILKRLAKIVGFTYDLYLVTNGKHGKKIDGVWN
GMIGEVVYKRADMAIGSLTINEERSEVVDFSVPFVETGISVMVSRSNGTVSPSAFLEPYS
PAVWVMMFVMCLTVVAVTVFIFEFFSPVGYNRSLQNGKKAGGSTFTIGKSVWLLWAIVFN
NSVPVENPRGTTSKIMVLIWAFFAVIFLASYTANLAAFMIQEEYIDTVSGLSDKKFQHPE
EQYPPLKFGTVPNGSTEKNIRSNYPGMHQYMGKYNQRGVEDAILNLKTGKLDAFIYDAAV
LNYMARKDEGCKVMTIGSGKVFATTGYGIALHKNSRWKRPLDLALLQLVGDDEIEMLERL
WLSGICHNDKIEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHLIYWKLRHCMATSSG
KLDFLLAISRGMYSCCSFEDETAPGGAKSLPTHHHTAMVTVPSQPHVVSTSMTNPVIAMA
QQQQPPQQQQPQPVYKTPLPGSPPTVVHSGTALGPSNTAIAGAPLPCSTFLPRPDRRLAV
VDRWRLPKSAAASNPMAVRGAITDMGPFAQKVPPNWAPTAGGGGGLDGYKRYYGPIDPEG
LGPCMEQQAGSQTPKTMPRGHPQPPPASVAFYSEKGMDHGVGKRVVGGGSGGQGKGAVKP
LGTPRLPPKSQAPLPPTPPLPHPSPPLPSSFWRKRRPKKPKEPGGPLYENILPLGQRGGA
RDGVREGGGRRARPLSPPLSLPVPVPLSPSYTPPSPSASLHYTSSSSSSTTSSTSTSSSA
SSSRSTSPTYSYSSSRSTRDRTGGIDGEDDDDDEELTEESSLLLGRGRERERSIIRPRSL
SHGRLPPPIPPRKPRTSWGDRERERERERGGSQLSQLQEWWASWSERERSGAGGDAERQK
REKKRRKEKEKEKKKKKKNKKRKKREERERERERERKRRKVKKKKKKELKTEKRKKSIGG
RRSEPEEGDVEPEREGEVEGEREGGLQDYSFSAQYRSTFGEKGRDSWEGDRERGRREGDE
GNDREQEDSSRSRERRPKSSHSHSRHRVANKRYPNLNKLPASVKFWVNGRGNDSNTPPTS
LHPLLPSSKRRRSDGLDRDDSGRVGERRPLLMHYEKEKAPTREGLSFPEWESEDDDDDDD
DDDDEEEEERDRVRERVADRGRRAGRRAVSESERDRARAEDSYSDEGSSGEFGRFERYWE
GGAGGGSTGIGGIGGGGWFFGTYPSREKGGSINSRDDSLLGTRAEGWIGADFWGSGPGVG
WGSGGGSGGLGSQWPPPPAAFPPPRRYWSMDKIPVKGEKKWKSGGGKSKGRARNRGEEAR
RATMCSCSLYPQPHPYPHPHSRSHTSHSKRGTTALSHSQEELIPHCHSFSGGSRPKPLPP
KPDPSQAKSGSQSNLSLSTQPTDHPPQPSPSSPQPSMSPTSLPMPIPPPPSSSSVSPPAG
VGMVGQGQAQASASAKLQYQRLRSVPQPRRFYSPHLPLKAKSLCSRRGSAHFSSLESEV
NT seq
6120 nt
NT seq
+upstream
nt +downstream
nt
atgtatatatacatatatatatttagatatatatattttcccagcgtgagtgtgtgtgtg
cgtgtgtggtggcggcggcggtggggggggggacacccgcaaaacggatacctcaaaaag
gaaggatgtgaaaaaggatggagggacgcaggaaaagaggggggaaaggctggtgaaaaa
cagcaccctctcttagtgcgatatatagctgcctccccccctcggcaggttgccatggtc
gccatacctactctctctctcctattggtcctggcagagtgggcaggtctggtggactgt
tccccccacctcctgctccggcccagtccgcgggaacgtgatgcaggcgccatgatgaac
ttcaacatcgccgtgatccacgccggtgctacggtgcaggccgaggcagcggtggcgggg
cccgggggaagggtgctctaccccggcttcggccgggtatacggctccctgggggagagc
gtggtcacccagtggggctctgctaacgtcatctggctacaggtgaatgacagtagtcct
aagacggtgctgtcccagctgtgtgagctgctggcggcgcggcccctgcagggtctggtt
tatgaagaggagaggccccctcgcacggcctggggtccattggccccaatgctggagttt
gtctctgcgcaaacaggactgcccatagtggctgtaggagggggagcggggctggggagg
atgccacaggaatcaggttccatctttctccagttcagctcctctactgccctccaatta
gaggtcatctttgaggtgctggaggagtacgattggacatccttttccgtggtgtgcaca
cggcaccatggctaccaggatttcctgtctgtggtggagggcctgaccgacggctcgttc
atcggctgggagaagaagagtgtggtgatcctgaacgtgaccgacgaccccgcgggggca
cgcacgcgcaggctgctgaaggagaacgaggcgcaggtacgtttgctgtactgctcccag
gaggaggccgagctggtcttccgagccgcctgggccgccggtcaggccggagcctcgcac
atgtggttcgctgtggggccggctctctcaggtttgagcatggagagcctgcctcgggct
gtgtttgccgttcggccccagggctggagggatgaacctcgcaggaggattgctcgtgga
gtgtctgtgctgactcacggggcagtggccatgcgcaaggattacggaactacgggcggg
ccgaactttgtcaccaactgcatgacggatgctaatcagacccagagactgcggggcagg
atgaggtatttcggcaacatcacacttggtggtcgagactattccttcaatggtgacggt
tacctgtccaaccccttccttgatgtcatttcctggacacctggacgtggatgggaagat
gtaggctggtgggagaacggcgtgctgaggcttcggtacccagcctggtcccgctacggg
ccattccttaaaccacctgatgatgcccagcacctgcgcgttgtcacgctggaggaaagg
ccatttgtcattgtggagctggcagacgccgcatccgggacctgcatccgagactcagtg
ccatgcagacgaccactcaatgccagtgccatccatgaaggtgtggctcccatgaagcaa
tgctgcaagggcttctgcattgacatcctcaagagactggccaagattgtcggcttcacc
tatgacctttacttagtgaccaatgggaaacatgggaagaaaattgatggggtttggaac
ggcatgattggagaggtggtatacaagcgggccgacatggccattggctcgctgactatc
aatgaggagaggtcggaagtcgtggacttctctgtccctttcgtggagacggggataagt
gtcatggtctcccggagcaatggaactgtatccccctctgctttcttagagccctacagt
ccagcggtgtgggtgatgatgttcgtcatgtgcctgaccgtcgtggctgtgacagtcttc
atctttgagttcttcagccctgtgggctacaaccgcagcctccagaacggcaagaaggct
ggagggtctactttcaccataggaaagtctgtatggcttttgtgggctattgtcttcaac
aactccgtgccagtggagaaccccagaggaaccaccagcaaaatcatggtgctgatctgg
gccttctttgccgtcatctttctggcctcctacactgctaacctggctgcctttatgatc
caggaggagtacattgacacagtgtctggcctctcggacaagaagtttcagcatcccgag
gagcagtacccacctctgaagtttggcacggtgcccaacgggagcacagaaaaaaacatc
cgctccaactacccaggcatgcaccagtacatgggcaaatacaaccagagaggagtggag
gacgctatcctaaacctcaagaccgggaaactggatgcttttatttatgatgctgcagta
ttgaactatatggccaggaaggacgaaggttgtaaggtgatgaccataggctcggggaag
gtttttgccaccacaggctacggtatcgccctgcacaaaaactcacgctggaaacgtcct
cttgacctggccctgctgcagctggtgggagatgatgagattgagatgctggagcgcctc
tggctatcagggatctgccataatgacaaaattgaggtgatgagcagtaaactggatatt
gacaacatggctggggtcttctacatgctgctggtggctatgggcctcagtttgctggtg
tttgcttgggaacacttgatctactggaagcttcgccactgcatggccaccagttctggc
aaattggactttctcctggcaatcagcaggggcatgtatagttgctgtagctttgaggat
gaaacagcaccaggtggagcaaaatctttgcccactcatcaccacacagcaatggtcaca
gttccgtcccagccacatgttgtatcaacgtctatgaccaatccagtcattgccatggcg
caacagcagcaaccaccgcaacagcagcaaccgcagcccgtctacaaaacacctctgccg
ggctctcctcccaccgtggtgcattctgggacagcactgggtccctccaacaccgccatt
gctggcgcacccctcccttgctccaccttcctgccccggccagaccgcagactggctgtg
gtggatcgctggaggctgcccaaatctgctgcagccagcaacccaatggctgtaaggggg
gccatcactgacatgggaccctttgctcagaaagtcccaccaaactgggctccaactgct
ggagggggtgggggacttgacggctataagagatactatggtcccattgaccctgaggga
ctggggccctgcatggagcagcaggcagggtcccagacccccaagactatgcctaggggc
cacccccagccccctccagccagtgtggccttctattcagaaaagggcatggaccacggg
gtggggaagagggtggtgggaggtggcagcggaggtcaggggaaaggggccgttaaacct
ctgggcactcccagattgccgcctaagagtcaggcccctctgcctcctacacccccgctg
ccacacccctctccccctctcccctcatccttctggaggaagcgtaggcccaagaagccc
aaagagcctggagggccactgtatgagaacattcttcccctggggcagaggggaggagca
cgagatggagtgagggagggaggagggaggagggcacgccccctctctcccccgctctca
cttcctgtgccagtacccctcagcccctcttacacccctccttcgccctctgcatctttg
cactatacgtcctcctcctcttcgtcaaccacctcatccacatccacgtcctcatctgcc
tcatcttcgcgctccacctctcccacctactcttacagctcatctaggagcacacgggac
aggactggaggaatagatggagaagatgacgacgacgatgaggagctgacagaagagtca
agcctcctccttggcagggggagggagagggaacgctcaatcattcggcctcgttccctc
agccatgggcgcttgccgccacccataccccccaggaaaccacgcacatcctggggtgac
agagaaagggaacgggagagggagagaggaggaagccaactgtctcagctccaagagtgg
tgggcaagctggagtgagagagagaggagtggagcgggtggcgatgctgagaggcaaaaa
agggaaaagaagaggagaaaagaaaaagaaaaagaaaagaagaagaagaaaaagaacaaa
aagaggaaaaagagggaagaaagggaaagagagcgcgagagagaaaggaagcggcgaaag
gtaaaaaagaagaagaaaaaggagcttaagacagagaaaaggaagaagtcaattggggga
agacgctctgagccagaagagggcgatgtagagccagagagggaaggagaggtagaagga
gagagggaaggaggactacaagactactccttctctgctcagtatcggagcacatttggg
gagaagggacgggattcgtgggaaggagatagggagagaggaaggagggaaggagatgaa
ggcaatgacagggaacaggaggacagcagcagaagcagggagaggcgtcccaaatcctca
cattctcattcaagacatcgtgtcgccaataagcgttaccctaacctcaacaaactccct
gcatctgtgaaattttgggtgaatggaagagggaatgattctaatactcctccaacatcc
ctccacccactccttccatcctccaagcggagaagaagtgatgggttggacagagatgac
agtgggagagtcggagagcggcgtccgttgttaatgcattatgaaaaagagaaagcacca
acaagagaagggctttccttccctgagtgggaatctgaggatgatgatgatgatgacgat
gatgacgatgatgaggaagaggaggaaagggacagagtaagggagcgggtggcggatagg
ggaaggagagcaggtaggagagcagtgtctgagtcagagagggacagggccagggcagag
gacagttattcagatgagggctcgtcgggggagtttggtcgttttgaaagatactgggaa
ggaggtgcaggggggggcagcacggggatagggggtatagggggaggaggctggttcttt
ggtacctacccctccagagagaaggggggcagtatcaacagtcgggatgattccttgcta
ggaactcgggcagagggatggattggtgctgatttctggggttcagggccaggagtaggt
tggggctcagggggagggagtggagggctcggctcacagtggccgccgccccctgcagcc
ttccctccacctagaagatactggtctatggacaagatccctgtaaagggagagaaaaag
tggaagagtggaggaggaaaaagcaaggggcgagctagaaacagaggggaagaagcaaga
cgggccaccatgtgttcctgcagcctttacccccaaccccatccttaccctcatccccac
agccgctcgcacacctcccactccaagagaggaaccacggcgctttctcatagtcaggaa
gagcttattccccactgccacagcttcagtggtggctctcgtcccaagcctctgcccccg
aaaccagatcccagtcaggccaaatcaggcagccaatctaacctcagcctcagcacacag
cccacagaccatccacctcagccctcaccgtcgtcaccccagccgtccatgtctcccacc
tccctaccaatgcccatcccgcctccaccctcctcttcctctgtctcaccaccagcaggg
gtaggaatggtaggccagggccaggcacaggcttcggccagtgccaaactccagtatcag
agactgcgctctgtgccacagccacggaggttctactccccacacctgccactcaaagcc
aagagcctatgctctcgccgagggtcggcccacttctccagcctggagagcgaggtatga
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integrated database retrieval system
