Clinocottus analis (woolly sculpin): 137780919
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Entry
137780919 CDS
T10471
Symbol
col14a1a
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
cana Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cana00535
]
137780919 (col14a1a)
Proteoglycans [BR:
cana00535
]
Extracellular matrix (ECM) proteoglycans
Others
137780919 (col14a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Ig_DSCAM-DSCAML_C
DUF4959
VWA_3
Motif
Other DBs
NCBI-GeneID:
137780919
NCBI-ProteinID:
XP_068425396
LinkDB
All DBs
Position
Unknown
AA seq
1781 aa
AA seq
DB search
MASAGQLRWFLWTPLVLLVLVSHFPSVAQGQVPVPRRLRFKVLSPSKLLVSWKEPKGDFD
SYLFLYNSTGGQQREIIISKSDTKVLITDYSASKEYTVSVISVSGSEQSRPLQGRHKAER
GESDGKDETERERLTEAVAPPDHANEISGVDQFVCHTEAIADIVILVDGSWSIGRLNFRL
VRMFLENLVDAFDVGIDKTRIGLAQYSGDPRIEWHLNAFSTKDAVIDAVKNLPYKGGNTL
TGLALTYILEHCFKPESGSRVGIPKIGILITDGKSQDDVIPPAESLRNAGIELFAIGVKN
ADETELLSIASEPDNTHVFNVADFNVMSSIVQGLTKIVCEQVEQQDKDIKQQLPPEETGA
PLELVTSEVTARSFRVSWSHAPGNVEKYRVLYYPASEGEPQEAVVDGSESSAVLQHLRSL
TEYQLAVFAVYANEASEALRGSETTLALPPVTALQLLDVTHSTMKARWDSVDGVSGYMLL
YAPLVDDGDSGEKEVKVSDAVTELQLDGLTPLTEYTVTVYAMYGEEASDPVTNQGSTLPL
SPPSNLQFSDITHNSAHISWDPVPKRVKGYRIMWVKTDGLVTEEVEVGPDNSYDLSELTS
LMEYSVAIFALYNEGQSEALTDGFTTTPVPGPLDLRSNNVGTHSFQVRWDHSANDIILYR
LSWAPFAGGDTKEVVLSGIDNRYTLTGLSPSTEYEVMLTAVFKDESESDTVSVIETTWDV
TTTIATTTPMARQAVRNLQLSDATTESLEASWQLEDPNVESYRVSYAGLRGRHQEESVLV
PGVQRSAVLLPLLSDTQYKVTVTPVYTDGQDGSSVSALGATLPLFSPENLRVSEEWYNRF
RVSWDPAQAPAAGYRIAYQPMDVSGPVVETTVGEDVNSKLLMNLLSGTEYSVQVEASYPA
GQSEPLLVNAKTLFLGVSGLSSYQLRPNSLCVQWQPLLRATLYRVSIQSTLNGQRQEVRL
GGGASRQCFYDLTPSSQYQISVHTQVQEMEGPSVSITDMTLPAPTQAPTELPTTEPPPTI
PPAKEVCKEAKADLAFLVDGSWSIGDDNFMKITRFLYSTMGSLDLIGPDGTQVAIAQFSD
DARTEFQLSSHGNKEALLEAIQKIRYKGGNTKTGRAIKHVKDSIFTSEAGARRGVPKVLV
VLTDGRSQDDVNKVSKEMQVDGYIIFAIGFADADYGELVNIASKPSDRHVFFVDDLDAVK
KIEEQLITFVCEAATATCPSVLMGGNTMAGFRMMEKFGLVEKEYSTIPGVSLEPGSFNSF
PCYRLHRDALVSQPTKYLHPEGLPSDYTISMMLRLLPETPQEPFALWEILNKDNEPLVGL
ILDTDGKTLTFLNYDYKGDFQTVTFEGAEIKKIFHGSFHKLHVTVSKTSVKVVLDCSVVG
EKSVGAAGNITTDGVEILGRMIQSRGRRDNSAPFQLQMFDIICSTSWASRDKCCELPALR
VEEQCPSMPHACTCSQDSKGPAGPSGPPGGPGIRGARGDRGEPGVTGPHGPAGELGPPGP
SGPPGPQGPSGLSIQGPPGAAGGKGDRGEIGPAGQMGVPGGSGSPGRDGPPGARGLPGNN
GPQGRQGPPGPAGTPGAPGPLGPGGATGSQGDQGLPGPAGTKGDKGERGDVQSQAAVRAI
ARQVCEQLIQNHLSRYNSVLNQIPVQSAVSVRTVPGPPGEPGRRGLPGPQGEQGPSGRPG
FPGAGGQNGRPGERGPLGEKGERGSPGVGSQGPRGQPGPPGLPGEGRTGSQGPPGRPGNT
GTPGRSGNPGGPGPAGPPGYCDQNSCMGYNVGVQQDYGNDY
NT seq
5346 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagcggggcagttgaggtggttcttgtggaccccgctggtgttgctggtcctg
gtttcccacttcccctccgtggcacagggtcaagttccagtcccgaggaggctgcgattc
aaagtgctgagcccgagcaaactcctcgtttcatggaaggagcccaaaggagactttgac
agctatctattcctctacaacagtacaggtggtcagcagagggagatcataatatccaaa
tctgacactaaggtgttgataacagattacagcgcctcaaaggaatacacggtcagcgtc
atcagcgtcagcggcagtgagcagagcaggccgcttcagggcagacataaagctgaaaga
ggtgagagcgacgggaaagacgagactgagcgagagcggctgaccgaggcggtggcgcct
cctgaccacgccaacgagatctctggagtggatcagttcgtctgccacactgaggccatt
gcagacatcgtgatcctggtggacggctcctggagcatcggtcggctcaacttccggctg
gtccgcatgttcttggagaatctggtggacgccttcgacgtcggcatcgataaaaccagg
ataggtctggctcagtacagtggcgatccccggatcgagtggcatctaaatgctttctcc
accaaagatgccgtcatcgacgctgtcaagaacctgccgtacaaaggaggaaacacgctc
acaggccttgcgttgacctatatcttggagcactgcttcaagccggagtccggctcccgg
gtgggcatccctaagattgggatcctcatcacagacgggaagtcccaggacgatgtcata
cctcctgcagagagtctgcgtaatgccgggattgagctgtttgctattggtgtgaagaac
gctgacgagacggagctgctctccatcgcctccgagccggacaacacgcacgtcttcaac
gtggccgacttcaacgtcatgagctccatcgttcagggtctgaccaagatcgtgtgtgaa
caagtggagcagcaggacaaggacatcaaacagcaacttccaccagaggagacgggggcg
ccgctcgagctggtgacatcagaagtcacggcccgcagcttcagggtttcatggagccac
gcccccggaaatgtagagaaatacagagtgctttattatcccgcgagcgaaggagaaccg
caggaggcggtggtggacggcagtgagagttcagcggtgttgcagcatctccgctccctc
accgagtaccagctggccgtgtttgctgtgtacgcaaacgaggcgagcgaagctctccga
ggatcggaaacaaccctggctcttcccccagtgacggccctccagctgttagacgtgact
cacagcaccatgaaggcgagatgggacagcgtggatggcgtttccggctacatgctgctg
tacgcgccgctcgtggacgatggagactcaggcgagaaggaggtcaaggtgtcggatgca
gtgacggagctgcagctggacgggttgaccccgctcactgaatacaccgtcaccgtgtac
gccatgtacggcgaggaggccagtgaccctgttacgaaccagggatctacattaccactg
agtccgcccagcaacctccagttctctgacatcactcacaactccgcccacatcagctgg
gaccccgtgcccaaaagagttaaaggttaccgcatcatgtgggtcaagacagacggactc
gtcacggaggaggtggaggtgggtccagacaactcttatgacctcagtgagttgacgtct
ctgatggagtactcggtggccatctttgctctgtacaacgagggccaatcagaggctctc
acagacggattcactaccactccggttcctggtcctttggatctacgctccaacaacgtg
ggcacacacagcttccaggtccgctgggatcactcagccaatgacatcatcctctacaga
ctctcatgggcgccgttcgcaggtggcgacacaaaggaggtggtcttgagtgggattgac
aacagatacactctgactggtctgagtccatcgactgagtacgaagtcatgctgacggcc
gtattcaaagatgagtctgaaagcgacaccgtctccgtgatcgagaccacatgggacgtg
acgacaacgattgctaccacaaccccaatggcccgtcaggccgtgagaaacctgcagctg
agtgacgcgaccacggagagcctggaggcgtcgtggcagctggaagaccccaacgtggaa
agctacagggtctcctacgccggcctcaggggccgccaccaagaggagtctgtgttagtt
cctggcgttcagaggagtgcggtgcttcttcctttactatcagacacccagtacaaagtg
acagtcacgccagtgtacaccgatggacaagacggcagcagtgtctctgcgctgggtgcc
acattgcctctcttctctcctgaaaacctgcgcgtgtcagaggagtggtacaaccgcttc
agggtctcctgggatccagctcaggcgccggcagcgggttacaggatcgcataccagccc
atggatgtttcaggacccgttgtggagacaacagtgggtgaagatgtgaactccaagctg
cttatgaatcttctcagtgggacagagtacagtgttcaagtggaggcttcttaccctgca
ggacaaagtgaacccctgctggtgaatgccaagacattgttcctcggcgtctctggcttg
tcgagctaccagctacggcccaacagcctttgtgtccaatggcagccgctgctacgcgcc
acattgtacagagtctccatacagtccacactcaatggtcagagacaggaagtgcgcctg
ggaggcggagcttcgcgacagtgcttctatgacctcacgcccagcagccaataccagatc
agtgttcacacgcaggtgcaggagatggaaggaccctcagtttccatcacggacatgaca
ctgccggcgcccactcaagctccgaccgagctccccaccacggagccgccgcccaccatc
ccacccgctaaagaagtgtgtaaagaggccaaagccgacctggcgttcctggtcgatggc
tcgtggtccatcggagacgacaacttcatgaagatcacgcgattcctctacagcaccatg
gggtcgctggatctgattggaccagacggcactcaggtggccatcgctcagttcagcgac
gatgcccggacagagttccagctgagttctcatggcaacaaggaagcgctgctggaagcc
atccagaagatccgatacaagggaggaaacacaaagacaggtcgggccatcaaacacgtg
aaggactccatcttcacctcagaagccggagcgcgacgcggcgttcctaaagtcctggtc
gttctcaccgatggacgttcccaagacgacgtcaacaaagtgtccaaggagatgcaggtg
gacggctacatcatcttcgccatcggcttcgcggacgccgactacggggagctggtgaac
atcgccagcaagcccagcgatcggcacgtcttctttgtggacgatctggatgccgtgaag
aaaatagaagaacagctcattactttcgtctgtgaggctgcaaccgccacttgtccgtct
gttttgatgggtggcaacacaatggcaggtttccgtatgatggagaagttcggcctggtg
gagaaggagtacagcaccatacccggagtttctctggagccgggttccttcaacagcttc
ccctgctacaggttacaccgggacgccctggtgtcgcagcccaccaagtaccttcatcct
gaaggtttaccctccgactacaccatttccatgatgctccgcctgcttcccgagaccccg
caggagccctttgcattgtgggaaatcctcaacaaggacaacgagccactggtcgggctc
atcctggacaccgatggaaagaccttgacgttcctcaactacgactacaaaggagacttc
cagaccgtcacctttgaaggagctgaaataaaaaagatcttccacggcagcttccacaag
ctccatgtgaccgtcagcaagacgtccgtgaaggtggtgttagattgctccgtggtcggg
gagaagtccgtcggcgctgctggtaacatcaccacagatggagtggagatcctcgggagg
atgattcagtccagaggcagacgggacaactctgctccattccagctccagatgtttgac
atcatctgcagcacgtcctgggccagcagagataagtgctgcgagctgccggcgttgaga
gttgaggagcagtgcccctccatgcctcatgcctgtacctgctcccaggacagcaaagga
cctgcaggaccgtccggaccccctggcggtccaggcataaggggagccagaggagaccga
ggagagccaggagtgacgggacctcatgggccagcgggagagctcggccctcctggaccc
tcaggacctcctggtcctcagggacccagcggcctctctatccagggacccccgggtgct
gctggaggaaagggggacagaggagagatcggtccagccggacagatgggcgttcctgga
ggctcgggctcccctggtagagacggtcccccaggagcgaggggtctgccgggtaataat
ggaccacagggacgacaagggcctcctggacctgctgggaccccaggagcacctggacct
ctaggacctggtggggcaacagggtcgcaaggagatcaaggacttcctggtcctgctggt
accaaaggtgataagggagaacgaggtgacgtgcagtcccaagccgctgtgcgtgccatc
gcacggcaagtgtgtgagcagctcatccagaaccacttgtcgcgctataactccgtcctg
aaccagatccccgtccagtcggcggtgtcggtgcgaacggtgcccggaccgcccggagag
ccgggcaggagaggcctcccggggcctcagggggagcaagggccgagcggcaggccgggc
ttcccgggcgccggcggccagaacggacgaccgggagagagaggtcctttgggagagaag
ggagagagaggaagtccaggagttggaagtcagggacctcgaggacaacccggacctcca
ggcctgccaggtgaaggacggacaggcagccagggtccacctggccggcctgggaatacg
ggaacaccgggaaggtcagggaatccaggtggcccagggccagctggcccgccaggctac
tgtgaccagaactcctgtatggggtacaacgtcggagttcaacaggactatgggaatgat
tactga
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integrated database retrieval system
