Clinocottus analis (woolly sculpin): 137780974
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Entry
137780974 CDS
T10471
Symbol
nod1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04621
NOD-like receptor signaling pathway
cana05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
137780974 (nod1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
137780974 (nod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cana04054
]
137780974 (nod1)
Pattern recognition receptors [BR:
cana04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
137780974 (nod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
CARD
LRR_4
NOD2_WH
AAA_16
AAA_22
NPHP3_N
RsgA_GTPase
ABC_tran
NTPase_1
NB-ARC
Sigma54_activat
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
137780974
NCBI-ProteinID:
XP_068425532
LinkDB
All DBs
Position
Unknown
AA seq
954 aa
AA seq
DB search
MEHTKAAGDRFALNMGQMEEAKVPCLSILTYHRELLVSRLKSIQCILDNLLAYGFVCEED
VEIVQRSATKTDQVRKVLELVQCKGEEACQYFIYIIYKVCDAYIDFQPWLKEINYSPSSD
VAAMMVVNTDPISRYREKLRQEMSRDTCFIMSYGQQEETRLEDLYTDTQMELLNDCNESL
GFLESLEQLLGDHAVFNPQGETIYVMGDAGVGKSVLLQKLHNLWSKKQLQTDAIFCFKFR
CRMFSVFKDTDQISLGDLLFKYNCYPDHDPDNEVFDYILRFPEKVLFTFDGYDEIQMDDL
MNVPEVVSPEVKAHPVQLLISLLCGKLLKGSQKVLTARTGTEIQSRVIRKKVALRGFSLA
HLKTYINLYFKEQEHQALVSVQLDASPHLCGLCSTPLFCWIVLKSFRHLHTMHDSFHLPE
TCITLTDIFLLLSEVFLSHAGSTAPPLLKKSTRCVSETFKVGIKPLAAFAKLALWGMERG
SFIYSQEVITECGLAEKDLTLGFLRPVSEYDGSGSPATFEFLHIILQSFLAAFALVLDEQ
AAAGSILKFFTECSRKSEPACLPFDFCICSSSNSNEKMPFETNEHLQFTNLFLCGLLSKA
HAGLMEHLVSPVLLKKKRALLKSYLSTSVKSHLIGLPHYNGEDGKKVHVLPNFLWMLRCI
FETGSKDIALMTAKGITAGFIKLGYCNVFSGDCTALNFVLQHRQKLLGLDMDNNNISDYG
VKQLRPSFCKMTVVRLSVNHLSDSSIEVLAEELCKHKVVEVLGLYNNYITDAGAKLVAQI
IEECPKLRVVKIGKNKITSVGGRHLASAIQRSTSIFDVGMWGNSIGDDGAIAFAEALRHH
PRLTNLSLSANGITSKGGRRLAEALKENCVLRIFWLVQNELTDDAVPHLAELIQANTGLS
HLWLINNQFTVAGVKNLAAALIHNTALKEICVKGNQLSEEEEKQFEGEKRLQFH
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atggagcatacaaaagcagctggtgaccgttttgcattaaatatgggtcagatggaagag
gccaaggtgccgtgccttagcatcctcacctaccacagggagctgctcgtgtcccggttg
aagagtattcagtgcatcctggacaacctgttggcctacggcttcgtgtgtgaagaggat
gttgagatcgtacagcgatctgccaccaagacggatcaggtgcgtaaagtcttggagtta
gtccagtgcaaaggggaggaggcctgtcaatactttatttacatcatatataaagtatgt
gacgcatacatagacttccagccatggttgaaagagatcaactactccccaagtagtgat
gtagcagcgatgatggtggtcaacaccgatcccatcagcagatatcgtgagaagttaagg
caagagatgagccgggacacctgcttcatcatgtcatatggccagcaagaggagacccgt
ctggaggacctatacactgacacacagatggaactgttgaatgactgcaatgaaagtttg
ggcttcttggaaagtttggagcagctcctcggagaccatgcagtcttcaatcctcaaggt
gaaaccatctatgtaatgggggatgccggtgtgggaaaatccgtcctcctgcagaagctt
cataacctctggtccaagaaacagctgcagacggatgccatcttctgctttaagttccgc
tgcaggatgttcagcgtcttcaaggacaccgatcagatctccctcggagaccttttgttc
aaatacaactgctacccagatcacgatcctgataatgaggtgtttgactacatcctgcgc
ttcccggagaaggttcttttcacatttgatggctatgatgagattcagatggatgatctc
atgaatgttcctgaagtggtgtcaccagaagtcaaggcacaccctgtccagctgcttatc
agcttgctctgtgggaaactactcaagggctcccagaaggtgctaacagcccggacgggt
accgagatccagagtagggtgatcagaaagaaggtggctctgcgggggttctcactggct
cacctgaagacctacattaatctttacttcaaggagcaagagcaccaagcactggtgtcg
gttcagctggatgccagcccccacctatgtggcctctgctcgaccccactgttctgctgg
atcgtgctgaagagctttaggcacctgcacaccatgcacgatagctttcatctacctgag
acctgcattaccctcactgacatcttcctcttgctgtctgaggtgttcctgagccatgca
ggatcaactgcaccgcctctgttgaagaaaagcactcggtgtgtctcggagaccttcaaa
gtgggcatcaagcctctagcggcatttgccaaactggccctttggggtatggagagaggc
agcttcatttacagccaagaggtgatcactgagtgtggactggcagagaaggacttgact
ctgggctttctcagacctgtcagtgagtatgatggcagcgggagccccgctacatttgaa
ttcctccatatcatcctccagtctttcttggcggcgtttgctctagtgttagatgagcag
gctgctgccggctccatcctcaagttcttcacagagtgcagcaggaaaagtgaacccgca
tgtctgccttttgatttctgcatctgtagctcctcaaattccaatgagaagatgccattt
gaaactaatgaacacctccagttcactaatctgttcttgtgtggactgctgtctaaggct
cacgctggcctgatggagcacctggtgtccccggtgttgttaaagaaaaaacgggccctg
ctgaaatcctacctctccaccagtgtaaagtcccacctcattggcttaccccactacaat
ggtgaagatgggaaaaaagttcacgttttgcccaacttcctgtggatgctgaggtgcatc
ttcgagacaggaagcaaagacatcgctctgatgacggcaaaaggcatcacagccggcttt
atcaagctgggttactgcaacgtgttctcaggtgactgcaccgctctgaactttgtactg
cagcaccgtcagaagctcctgggccttgacatggacaacaataacatcagtgactatggg
gtgaagcagctgaggccctccttctgcaagatgacagtagtaagattgtctgttaatcac
ctgtctgacagcagcatcgaggttcttgcagaagagctgtgtaagcacaaagttgtggag
gtcttagggctttacaacaattacatcacagatgctggagccaagctagttgctcagata
attgaggaatgcccaaagctgcgagttgtcaagattgggaagaacaagatcacgagtgtt
ggtgggaggcatttggccagtgcaattcagaggagcacttctatatttgatgtgggaatg
tgggggaacagcatcggcgatgacggagctatagcatttgcggaagctctgaggcaccac
ccgagacttaccaaccttagtctctcagccaatggcattacatccaaaggtgggagacgt
ctggcagaagcgctgaaggagaactgcgtcctcaggatattctggttagtgcagaatgag
ttaactgacgatgcagtgccacacttggctgagttgattcaagcaaacacaggtttaagc
cacctctggttaatcaacaaccagttcactgtggctggggtgaaaaaccttgcagcagcc
cttatccacaacacagccctcaaagagatatgtgtgaaaggaaaccagctctctgaagag
gaagagaaacagtttgagggcgagaaaaggctgcagttccactga
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integrated database retrieval system
