Clinocottus analis (woolly sculpin): 137780984
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Entry
137780984 CDS
T10471
Name
(RefSeq) collagen alpha-6(VI) chain-like
KO
K06238
collagen type VI alpha
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04510
Focal adhesion
cana04512
ECM-receptor interaction
cana04518
Integrin signaling
cana04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137780984
04518 Integrin signaling
137780984
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137780984
09142 Cell motility
04820 Cytoskeleton in muscle cells
137780984
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cana04147
]
137780984
00536 Glycosaminoglycan binding proteins [BR:
cana00536
]
137780984
Exosome [BR:
cana04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
137780984
Glycosaminoglycan binding proteins [BR:
cana00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137780984
Hyaluronan
Extracellular matrix or blood plasma proteins
137780984
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_CoxE
VWA_3
Kunitz_BPTI
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
137780984
NCBI-ProteinID:
XP_068425550
LinkDB
All DBs
Position
Unknown
AA seq
2714 aa
AA seq
DB search
MEGRRYLLLSLIMAACFYGSAAQKTVCTQEAVADIVFLVDGSWSIGTENFQRIRQFLSTL
VSSFDVGPEEVRIGLVQYSTNPRSEFLLNTFQSKKDILHYISSLPYMGGGTQTGLGLDFM
LNEHFVKKAGSRGDQNVPQIAVVITDGKSQDNVEAHAQDLKRKGIVLYAIGIKDADEDQL
TEIASEPHSQHVYSVSDFAALQGISQSIVQTLCTTVEEVKRQLLQLSQECAKATVADIVF
LVDGSSSIGKENFQEVRQFLRSVVNGLDIGPDKVRIGLAQYSDEAIVEFLLKDHMDKNSL
LAAVDALPYRTGGTETGEAITFLQNNYFTEDAGSRASQRVPQIVVVITDGDSTDDVIAPA
KSLREQGIIVFGIGVGEANRKELESIANRPPDRFLSSIANYQALQMLKDRLLHTVCISVE
DQRQALAESFADIFFLVDSGMSSQNFLQVRNLLTRLVNQLNIGASAYRLGLAQYGPDVKV
EFLLNALQTKEDTQAAVKRFRLRKLQPNEPRKLGSALEFASTNFFTSGAGSRADQGYRQF
LVVISGKDSDDPVYRESRLIKSSGVTVVSMSLGASMMEMNLVATTPYAYQSIPSVPALKA
IFEREELETILTGDCKAAKLADIVFIVDESGSIGTPNFQLVRTFLHSVVNGLEVSPSRVR
VGIVTYNEKSTAQVYLNTFNDKKELLKFIKILPYRGGGTNTGAALAYALKEVFIPQRGSR
KTKGVQQVAVVITDGESQDSVSTAAADLRRDGITVYAVGVKDANDAQLVEMASYPPHKHK
FIVDSFTKLKSLEQSLQKMLCHNILRQAVSVNTRRIGIKEGCVQTDEADIFFLIDHSGSI
YPKDFKDMKMFITEFLHTFRIGPHHVRMGVVKYADRADLEFDLTEYTDAKSLEKAVEGIR
QIGGGTETGRALDFMSPHFDRAMVTRGHKVPEYLVVITDGKSSDEVKAPAEKLRAQGVIV
YAIGVKNADAVELGEIAGDPKRTFFVNNFDALKPIKDDIITDICSQDACKDAPGDLLFLI
DSSGSIFPQDYQKMKDFMKSVIGKSVIAQNAVHVGVMQFSTVQQLAFPLNLYYSKEDMSK
AIDDMQQVGGGTLTGEAIADVSQYFDATRGGRPGMRQRLVVITDGEAQDQVQGPAEALRA
KGVVVYAIGVVDANTTQLLEISGSPDRTYAERDFDALKDLESQVAMELCDPERECKKTER
ADIIFLVDGSTSITLSKFRSMQKFMASMVNQTTVGKDLTRFGVILYSNDPKSVFSLKTYN
SKREVLKAISALKSPYGDTYTGRALAYSLEYFNDAHGGRAGLQVPQILVVITDGDATDRN
SLVPPSLALRDNGISVFSIGVEGANRTQLEIMSGHDKSRVFYVDNFDALETLYKNISHVL
CNSTKPVCEKQKADLVFLIDQSGSISPNDYTTMKQFTTSVVNSFKVSEKLVRVGLAQFST
TFQKEFYLNQFYSEQAVTKHILDMQQLGGGTNIGVALDSIREYFEASRGSRRSEGVSQNL
VLITDGESQDDVEDAADRLRALGVEVFAIGIGNVHDLELLQITGTPDRLFTVQNFGSLEK
IKQKVVDTICKSKPNKDPSACSIDIAMGFDISRENRAPGEMLISGHAKLQAFLPEIARYV
SSVPGLCCVGPEPVKTNIAYKVLGRDGRSLYDFNFEAYSRDVVNKVMSLSLAEPTYFNAN
LLKAFGKRFSDQSQAGVKVLVIFSDGLDEDVMKLEQESELLRQSGVSALLTVALEGTRDP
AQLQMVEFGRGFGYKLPLSIGMAGVGNTVLQQIDSVSDRECCNVMCKCSGHEGSRGFRGP
PGSKGPSGQKGFPGFPGDEGVAGERGRPGPAGPQGVQGCSGLRGLKGYRGLRGNRGELGE
AGLDGVNGEQGRTGKSGGGGPKGDPGNPGIPGIRGEAGLRGQRGLRGDPGEPGADNTRPG
AKGDPGNAGLPGPPGPDGLPGESGVEGNLGPDGRRGALGEKGAPGGPGVPGVQGSPGASG
PQGTRGVRGQPGPRGVSGLPGPQGGPGSAGASGSGGRRGANGQKGQPGDPGDKGVPGSNG
PRGMPGQDGKDGYGPAGPKGVRGDSGFPGYPGLQGEDGLQGPSGQPGRKGNRGRGGNSGR
PGESGVSGEPGYPGHRGPRGLPGKKGMTECQLITSIRNNCACSLGPSECPAFPTELVLGL
DMSEDVTPAAFEKQRSVLLSLLENITVSESNCPTGARVAVVGYSAYTKYLIRFQDYHRKT
QLMESVKNIALERTSNRRQLGAAMRFVGQNVFKRVRAGTTMRKVAVFLSNGPSPDVNDIV
TAMMEYRALGIVPAVISLRNAPAVERAVELDDSGRSIFSVLGTDPAADLQKVQKCAVCYD
PCQRSPQCAFIQDPVQPQEVDIDLVLVVDGSREVQADEYAGVQQLLGSVVEQLVVSPQPR
RAGKQARVAVVQQGGAQDTKVGFGLGTYQTSALMRKHLIRNMTQLGGPSALGRTLEFTLK
EVLLKAGQPRRRRVLLTVVGTQTAHEDRAKLRYISQKAKCEGAALFVVTVGDRYDRTQVE
ELASLPVHQHLIHMGSLKTEEQGYAQRFFRVFLSALNKGMNTYPPPSFKRTCDQLTEQTG
GQVFINGQGAAVVDLEEFGEEEEEEERFQELAGGQTQTGQLDVVHTLTRGDGQRFVSEFN
DPDLLPSPVLTDFVSKERCLLVQDQGGCQNYTMMWFFDNQQKECSRFWFGGCGGNENRFK
TQDECETICATKSR
NT seq
8145 nt
NT seq
+upstream
nt +downstream
nt
atggaggggaggaggtatcttctcctcagcctcatcatggcagcgtgtttctatggcagc
gctgctcagaagacagtctgcactcaagaggccgtcgcggacatcgtcttcctggtggac
gggtcgtggagcatcggcaccgagaacttccaacggatccgtcagtttctgtccacgctg
gtcagcagctttgacgttgggcctgaggaggtccgcatcgggctggtccagtacagcacc
aatccccgcagcgagttcctgctcaacacctttcagagcaagaaggacatcctccactat
atcagcagcttgccttatatgggaggcggcacccagaccgggctcggcttggacttcatg
ctgaacgagcactttgtgaagaaggccggaagccgaggggaccagaatgtgccgcagatc
gccgtcgtgatcactgacggcaaatcccaagacaatgtagaggcccacgctcaggacctg
aaaagaaagggaattgttttgtacgcgattggtatcaaagatgcagatgaagaccagctg
acagagatagccagtgagccgcacagccagcacgtctacagcgtgtctgactttgcagcg
ctgcagggaatctctcagagcatcgtccagacgctttgcacaactgtagaggaagtcaaa
cgacaactcctgcaattgtctcaagaatgtgccaaagccacggtggccgacatcgtcttc
ctggtcgacggctcctccagcatcggcaaagagaactttcaggaggtccggcagtttctc
cgcagcgtagtcaacggcctggacatcggccctgacaaggttcggatcggcttggctcag
tacagcgatgaagctatcgtggagttcctgctgaaggatcacatggacaagaactccctg
ctggctgcagtggacgcgcttccctaccgaacaggaggcacggaaacgggcgaggccatc
accttcctccaaaataactatttcacagaggacgcgggcagccgagccagccaacgggta
cctcagatcgtcgtggtcatcacagacggagactccacggatgatgtgatagcacccgcc
aaaagcctgagggagcagggcattatcgtgtttggcatcggggtgggagaagccaaccgg
aaggagctggagtccatcgctaaccggcctccagatcgctttctgtcctccatcgctaac
taccaggctctgcagatgcttaaagaccgtctgctgcacactgtttgcatctctgtggag
gaccagaggcaagccttggcagaaagctttgcagacatcttcttcctggtggacagtggc
atgtcaagtcaaaacttcctgcaggtccgcaacctcctaacccgactggtcaaccagcta
aacatcggagcgtcggcctaccggctgggcttggcccagtacggtccagatgtcaaggtg
gaatttcttctcaatgccctccaaaccaaagaggacactcaggctgctgttaagcgtttt
cgcctgcgaaaactgcaacccaacgagcctcgtaaactgggcagtgctttggagtttgcc
agcaccaactttttcaccagtggggcaggaagccgggcggaccaaggctaccgacagttc
ctggttgttatcagtggaaaggactctgatgatcccgtgtatagggagtcacgtctgatc
aaatcctcaggagttactgtggtgagcatgagcctcggtgcatctatgatggagatgaac
ctagtggcgactacaccgtacgcctaccagtcgatccccagtgtacccgcactgaaggct
atctttgaaagagaggagctggagaccatcctcactggagattgcaaagcagctaaactg
gccgacatcgtgttcatcgttgatgagtctggaagcattgggacccccaacttccagctg
gtgcgcactttccttcactcggtcgtgaacggcctggaagtcagtccctctcgagtccga
gtgggcatcgttacatacaacgagaagtccacagcacaggtctacctgaacaccttcaat
gacaagaaggagttgctgaagttcatcaagatcctgccttatcgtggaggtggtacaaac
actggagcggccctagcatatgccttgaaggaggtttttatcccgcagagaggaagcagg
aaaacaaagggtgtccagcaggtggcagtggtaattacagatggtgaatcccaggacagc
gtgagcacagcagcagctgatcttcgtcgagacggtatcaccgtttacgcagtaggggtc
aaagatgccaacgatgcccagctggtggagatggcgtcatatcccccccataagcacaag
ttcattgtggacagttttaccaaactgaaatcactagagcagagcttgcagaaaatgctg
tgccataacatccttcggcaagcagtctcagtcaatacaagaagaattggcatcaaagaa
ggctgtgtacaaacggatgaagcagacatcttcttcctgattgatcactcaggaagcatt
tatcccaaagactttaaagacatgaagatgttcatcactgagtttctgcataccttccgt
attgggccacaccatgtccgcatgggggttgtaaaatacgcagatagggcagatttagaa
tttgatctgacagagtacaccgatgcaaagtcattggagaaagccgtagagggtattaga
caaataggaggtgggacagagacaggaagagctctggattttatgagcccgcactttgat
agagccatggtgactcgtggtcacaaggtgccagagtacttggtggtcatcaccgatgga
aaatcctccgatgaggttaaggctcccgcagaaaaactgagggcgcagggtgtcatcgtc
tacgccatcggggtgaaaaatgcagatgctgttgagctgggagagattgctggcgacccc
aagaggactttctttgtcaataattttgatgctttgaagcccatcaaggacgacatcatc
acagacatctgttctcaagacgcttgtaaagacgcaccaggcgacctccttttcttgatt
gacagttctgggagtatctttccacaagactaccagaaaatgaaagacttcatgaaatct
gtcatcggcaagtccgtcatcgcgcagaacgcggtgcacgtcggtgttatgcaatttagc
accgttcaacaactagccttccccctcaacctttactatagcaaggaggacatgtccaaa
gccatcgatgacatgcagcaggttggtggaggcacgctcacaggtgaagccattgctgat
gtgtcgcagtatttcgatgcaaccagaggagggcgtcctggcatgaggcagaggctggta
gtgataacagacggcgaggcccaagaccaggtccaaggcccagccgaagctctgagggcc
aagggagtggtggtctacgccatcggagtggtggacgccaacaccacccagctgctcgag
atcagcggttcaccagacaggacttatgccgagagggactttgacgctctgaaggacctg
gagagccaggtggccatggagctctgtgatccagagagagagtgtaagaagacagaaaga
gctgacattattttcctggttgacggctccacaagcataacgctgagcaagttcagaagc
atgcagaagttcatggcgtcaatggtgaaccaaactacagttggcaaggacctgactcgc
tttggcgtcattctttactccaacgaccccaaatccgtttttagtctgaaaacttacaac
tccaaacgagaggttcttaaagcaatatcagcactgaagtctccatatggagacacgtac
accggcagggctttggcctactccttagagtacttcaacgatgcacatggtggtcgcgcg
ggtctccaggtgccccagattcttgtggtgatcacagatggcgatgctactgaccgtaat
agtctggttcctccatctctggcactgcgagacaacgggatcagcgtcttcagtattgga
gttgaaggagccaacaggacacagctggagatcatgtctggtcacgacaaatctagagtt
ttctatgtggataactttgatgccctggaaacgctgtacaagaatattagtcacgtcctc
tgcaattccaccaagccagtttgtgagaaacagaaggctgacctggtcttcctcatcgat
cagtctggcagcatcagccccaacgactacaccacaatgaagcagttcaccacatcagtg
gtgaacagcttcaaagtcagtgaaaagttagtgcgtgtaggactggcccagttcagcacc
acttttcagaaagagttttacctcaaccagttttacagcgagcaagccgtcaccaagcac
atcctggacatgcagcagctcggtggaggcaccaacattggcgtggccctggattccatc
agggagtattttgaggcgtcacggggcagccgaagatccgaaggagtctcccagaatctg
gtgctgatcacagacggtgagtcgcaggatgacgtggaggacgccgctgaccgcctcagg
gctcttggggtcgaggtatttgctatcggcattggaaacgtccacgatctggagctcctg
cagatcaccggcactccagacaggctgtttactgtgcagaactttggcagcttggaaaag
atcaagcagaaggtggtggatacaatctgcaaatctaaacccaacaaagatcccagtgcc
tgcagcattgatatcgccatgggattcgatatttctcgtgagaacagagctcctggcgag
atgctgatcagcggccatgccaagctccaggccttcctgccagagatcgcccgttacgtc
tcttcggttccaggtctgtgctgcgtcggtccggagcctgtgaagaccaacatcgcctat
aaagtgctgggtagagatggacgctccctctacgacttcaactttgaggcctacagcaga
gacgtggtgaataaagtcatgagcctgagtttggcagagcccacctacttcaacgccaac
ctgctgaaggccttcgggaagaggttcagtgaccagtcccaagctggtgtgaaggttctg
gtgatcttctcagacggactcgatgaggacgtgatgaagctggagcaggaatcagagctg
ctgcgacagtctggggtcagtgctctgctgacggtggctctggaggggacccgggacccg
gcccagctgcagatggtggagtttggacgaggattcggctacaagcttcctctcagcatc
ggcatggcgggcgtcggcaacaccgtcctgcagcagattgactcggtgtcggacagggag
tgctgcaacgtcatgtgcaaatgttcaggccacgaaggcagccgaggcttccgaggcccg
ccagggtcaaagggtccgtctggacagaaagggttccccgggttcccaggagatgagggc
gtcgctggggagcgtggccgtcctggaccggctggacctcagggggtccagggttgttct
gggctcagaggactgaagggctaccgaggactccgtggtaacaggggagaactaggagag
gccgggctggacggggtcaacggagaacagggccggacgggaaagagtggcggtggagga
ccaaaaggagacccaggaaacccaggcatcccggggatccgaggggaggcgggtctgaga
ggccagcgaggactccgaggagatccgggggaacctggtgctgacaacaccagaccagga
gccaaaggagatccggggaatgcaggtctaccaggcccacctggaccggacgggctgccc
ggagagagcggagttgaggggaacctgggtccagatggaagaagaggagcgcttggtgag
aagggcgctcctggtggaccaggtgttccaggcgtgcagggttctcccggtgcttcaggt
cctcaaggaaccagaggagtcaggggtcaacctggaccaagaggagtctctggacttccg
ggacctcagggaggaccgggatcagctggagcttcaggatctggcggacgacgtggcgct
aacgggcagaagggccaaccaggagatccaggtgataaaggtgttccaggctcaaatgga
ccaagaggaatgccaggtcaggacggcaaggacggctatggacccgcaggacctaaaggc
gttcggggagactctggtttccccggataccctggtctacagggggaagatggcctgcag
ggaccaagcggacaaccggggcgcaaaggaaaccgaggacgaggcggaaactcaggccgg
ccgggagaatcaggtgtgtcaggagaaccaggatatccaggtcacaggggtccaagaggt
cttcctggaaagaaaggcatgactgagtgtcagctgatcacctccatcagaaacaactgt
gcgtgttccctcggtccgtcagagtgcccggccttccctaccgagctggtgctaggtctg
gacatgtcggaggacgtgaccccggcggctttcgagaagcagcgctccgtcctcctgtcc
ctgctggagaacatcaccgtctccgagagcaactgtccgacgggcgcccgtgtggcggtg
gtgggctacagcgcctacaccaagtacctgatccgcttccaggactaccaccgcaagact
cagctgatggagtctgtcaagaacatcgccctggagaggacgtccaaccggcggcagctg
ggggccgccatgcggttcgtgggccagaacgtcttcaagcgcgtccgagcaggaacgacg
atgaggaaggtggctgtcttcctctctaacgggccgtccccggatgttaacgacatcgtc
accgccatgatggagtaccgggccctcggcatcgtcccggcggtcatctctctgaggaac
gctccagccgttgaacgagccgtggagttggatgactcaggaagatccatcttcagcgtt
ctggggacagacccggctgctgacctgcagaaggtccaaaagtgcgccgtctgttacgac
ccctgccagcgttcgccgcagtgcgccttcatccaggacccagtgcagcctcaggaggtg
gacatagacctggtcctggtggtggacggctccagggaggtgcaggctgatgagtacgcc
ggtgtccagcagctgctgggctcggtggtggaacagctggtcgtgagcccgcagccccgc
agggccggcaaacaggcccgggtggccgtggtccagcagggcggcgcccaggacaccaag
gtagggtttggcctcgggacctaccagaccagcgccctgatgaggaagcatctgatccgg
aacatgacgcagctgggaggcccgtcggcgctgggacggacgctggagttcactctgaag
gaggtgctgctgaaagccggccagccccgcaggaggagggtgctgctgaccgtggtgggc
acccagacggctcacgaggaccgagccaagttgcgctacatctcccagaaggccaagtgt
gagggggcggcgctgttcgtggtgacggtcggagatcgctacgaccggacgcaggtggag
gagctggccagtttgccggttcaccagcatctgatccacatggggagcctgaagacggag
gagcagggctacgcacagcgcttcttcagggtcttcctctccgccctcaacaagggaatg
aacacgtatccgcctccttccttcaaacggacgtgtgaccagctgacagaacaaactgga
ggacaagtgttcatcaacggtcagggcgcggcggtggtggacttggaggagttcggggag
gaagaggaggaggaggagaggttccaggagctggcgggaggacagactcagaccggccag
ctggacgtcgtccacactctgaccagaggagacggacagagatttgtctccgagtttaac
gatccagacctgctgccgagtcccgtgctgaccgactttgtctccaaagagcgctgcctc
ctggttcaggatcagggcggctgccagaactacaccatgatgtggttcttcgacaaccag
cagaaggaatgctctcgcttctggttcggcggctgcggcggcaacgagaaccgcttcaag
acgcaagacgagtgtgagacgatctgcgcgacgaagagccggtga
DBGET
integrated database retrieval system
