Clinocottus analis (woolly sculpin): 137781113
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Entry
137781113 CDS
T10471
Symbol
bcan
Name
(RefSeq) brevican core protein
KO
K06795
brevican
Organism
cana Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cana00535
]
137781113 (bcan)
00536 Glycosaminoglycan binding proteins [BR:
cana00536
]
137781113 (bcan)
04091 Lectins [BR:
cana04091
]
137781113 (bcan)
Proteoglycans [BR:
cana00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
137781113 (bcan)
Glycosaminoglycan binding proteins [BR:
cana00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
137781113 (bcan)
Lectins [BR:
cana04091
]
C-Type lectins
Lecticans
137781113 (bcan)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
V-set
EGF
EGF_2
Glutenin_hmw
Motif
Other DBs
NCBI-GeneID:
137781113
NCBI-ProteinID:
XP_068425783
LinkDB
All DBs
Position
Unknown
AA seq
1443 aa
AA seq
DB search
MSGGSARTRAAGCARELSPRKMKLDVSLPVLLAAVWLLVLPSSSNGHQESDDSKLLQVSI
PAGPPVVAVLGGALTLPCLVSPAHPPPSPSTSGRRAVLSAPRVKWSVLTHGRDAAEILVA
RGDRVRVSEAYKGRASLLHYASSPADLTLRLEGLRQNDTGFYRCEVQQGLEDADDVAQVK
VKGVVFHYRDAFSRYAFTFERAREACEEIGAEIATPEQLMAAYHSGYEQCDAGWLSDHSV
RYPIQMPRERCFGDMDGLPGVRNYGLLEPDELYDVYCYVEDINGEVFHGSAPQRFTFWEA
KAYCLSHGAELVTTAQLYAAWNDGLNLCSPGWLADGSVRYPIVTPRERCGGGEPGVRTVY
RYSNQTGFPEVHTRHDVYCFRSDNGAYTESPQDFLSTEPEDIGQDIVFLTNPGEEEYLMS
EATAQEGDEVQHAQTVNPVKRQPVEAQPPTLSYDKELLLTTKLHQSVTPPAEHQEHQEHL
EHQEHQEHQEHQEHQEHQEHQEHQEHQEHQEHQEHQEHQEQQENQEHQEHQEHQEHQEHQ
EHQEHQEHQEHQEHQEHQEHQEHQEHQEHQEHQEHQEHQEHQEHQEHQEHQEHQEHLPME
EDTWEVLEKAIFPESHQSAPEEKTDHEESHAPPTTSPKANGVGTIDEDSTSATPDAATPE
SKGPSDHSEISDPSDHSVHSETSDPSDHLDHSETSDPSDHLDHSETSDPSDHSDPSEHHT
YVTERPDAASVHTTPGPDADELPSSSPEVSVLQEDHTPDVHLELTSEAQLVHSSTCNCVS
EHPEEATTTSPRHEETDDRATTPSVNNGTSGNQPTEESGGESVNPLLNEEPENFVTPSLT
GMETTATVELVPTSAHEPTPELLGVTRESSIPVSHDDEDSSGTSEDPTSQNGPIYPAEPP
TVQVIAVTDDSSDSVTVSTPFTSGTPPPTSADVEGGGPLELTTLLPENNTSSGAEPSVVV
LQDRLGQEVLGEGSNVFLSATQNITHRDDPVGVEQDGGEGSGDALGESPEGKPGLPSTNP
TLLTDHTDDENATDPPSDVKITLIPHRTLTLPGWEPEPSSSTLQESRSDLEYSAEPPAAE
DGADVLKEQEVMTQTNAGNVSSNVSFGSSEEKEHGSEGGEVEASTDPGKVCTWRPDEEDE
EDATGPPLTADSSDVTAYPHHSAMAASRPAAAVSAARRSMTRVSAASCLENPCSNGGTCV
DGEPARCFCLSGYGGDLCQTDLELCESGWDKFQGFCYRHFSKRQSWEAAEQHCRLSGGHL
LSVMTPEEQDHVNDKYKEYQWVGLNDRTIEGDFRWSDGSPLLYENWYRGQPDSYFLSGED
CAVMVWHDGGRWSDVPCNYHLSYTCKKGVSSCSEPPSVPRAKVFGKKRLRYETNTKVRYY
CEGGYVQRRNPVIKCLPGGRWEEPQITCIPTRSMEGDAVTSLPHQQEVTQKAAPLFWDIA
WNV
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atgtccggaggctccgcgaggacacgagctgctggatgcgcgcgagagctgagcccgagg
aagatgaagctggatgtctctctacccgtgctgctggccgccgtctggctcctcgtcctg
ccgtcgtcctctaacggccaccaggagtcagacgactcgaagctcctgcaggtgtccatc
cccgccggcccgcccgtggtggctgtgctgggcggcgccttgacgctgccctgcctggtg
tccccggcccacccgccgccgtccccgtccaccagcgggcgccgcgccgtgctgtcggcc
ccccgggtcaagtggagcgtcctgacccacggccgggacgcggcggagatcctggtggcc
cgcggggaccgggtgagggtcagcgaggcctacaagggccgagcctcgctgctccactac
gcctcctcccccgccgacctcaccctgcggctggagggcctgaggcagaacgacaccggc
ttctaccgctgcgaggtgcagcagggcctggaggacgccgacgacgtggctcaggtcaag
gtcaaaggggtggtttttcattatcgcgacgccttcagccggtacgccttcacctttgag
cgagccagagaggcctgcgaggagatcggggctgaaattgcaactccggagcagctgatg
gccgcctaccacagcggatacgagcagtgtgatgcaggctggctctcagaccactcagtg
agatatcctatccagatgccaagagagcgttgctttggtgacatggacggcttacccgga
gtgagaaactatggactgttggagccggatgagctgtatgacgtctactgctacgtggag
gatatcaacggtgaggtgttccatggctccgccccccagcgcttcaccttctgggaggcc
aaggcctactgtctgagtcacggggccgagctggtcaccacggcccagctgtacgcggcc
tggaacgacggactgaacctctgcagtcccggctggctggccgacggcagcgtccgctac
cccatcgtcacccccagggagcgctgtggtggaggcgaaccgggggtcagaactgtctac
cgctacagcaaccagacgggcttccccgaggttcacactcgacacgacgtctactgcttc
agaagcgataacggcgcttacacagaatctcctcaggattttctttccactgagccagag
gacattggccaggacattgttttcttaactaatcctggagaggaggagtaccttatgagc
gaggcaacagcacaggaaggtgacgaggtccaacacgcccagacggtcaatcctgtaaag
cgacaacccgtggaggctcagcccccgacgttgagctatgacaaggaactgttgttgaca
accaaactccatcagtccgtcactcctccagctgagcaccaggagcaccaggagcacctg
gagcatcaggagcatcaggagcatcaggagcatcaggagcaccaagaacatcaggagcac
caagagcaccaggagcaccaagagcatcaggagcaccaagagcaccaggagcatcaggag
cagcaggagaatcaggagcaccaggagcaccaggagcatcaggagcaccaggagcaccag
gagcaccaagaacatcaggagcaccaggagcaccaggagcaccaagaacatcaggagcat
caagagcaccaagagcatcaggagcaccaggagcaccaggagcaccaagaacatcaggag
catcaagagcaccaagagcatcaggagcaccaggagcaccaggagcacctgcccatggag
gaggacacctgggaggtcttagagaaggccatcttcccagagtcccatcagtctgctcct
gaagaaaaaacagatcatgaagaatctcacgcacctccaaccacttctccaaaggccaac
ggcgtaggaaccattgatgaagactccacttcagccacgcctgatgcggcaacgccagag
agcaaagggccctcagaccactcagagatctcagacccatcagaccactcagtccactca
gagacctcagacccctcggaccatttagaccactcagagacctcagacccctcggaccat
ttagaccactcagagacctcagacccctcagaccattcagacccctcagagcatcatact
tatgtgactgaacgcccggatgcagcatctgttcacacaacacctggacccgatgctgat
gagctgcccagcagctctccagaggtttctgtcttacaagaggaccacactccagatgtc
cacctggaactcacctccgaagcacagcttgtccactcgagcacctgtaactgtgtttct
gagcacccagaggaggcgactactacatcgccccgccacgaggaaacggacgatcgcgcc
accacgccgtctgttaataacggcacgtctgggaaccagccaacagaagagtctggaggg
gagagtgttaatcctcttcttaatgaagaaccggaaaactttgtgactccaagtttgact
ggtatggaaaccactgccaccgttgaactggtccccacctccgctcacgaacccaccccg
gagctcctcggtgtaacaagggagtcgtccatccccgtcagtcacgatgacgaggactcc
agtggcacctcggaggatccgaccagccagaatggacccatctatcctgcagaacccccc
acagtgcaggtcatcgcggtcacagatgactccagcgattcggtcacggtttcgacgccc
tttacatctggaaccccaccgccgacttccgcggacgttgaaggcggtggccccctggag
ttgaccaccttgttgcccgaaaacaacacttcgtcaggggccgaaccatcggtggtcgtc
ctccaggacagacttggacaggaggtgttgggagaaggctccaacgttttcctcagcgcg
actcaaaatatcacacacagggatgatccggtgggggtggagcaagatggcggagaggga
tcgggtgatgcgttgggagaaagcccagagggaaaacctggactgccgtcaacgaatcca
actctcttaacggaccacaccgacgacgagaacgccaccgatccgccatcagatgtaaag
atcacgttgattcctcatcggaccctcacgctgcccggttgggaaccggagccttcttcc
tccaccttgcaggagtctcgctccgatctggaatacagcgccgagcctcccgctgctgag
gacggcgccgacgtcttgaaggagcaagaggtcatgactcagaccaatgccggcaacgtg
tcctcaaacgtttcgtttggttcgtctgaagaaaaagaacatggatctgaaggaggtgag
gtggaggccagcacagatccaggtaaagtgtgcacgtggcgtccggacgaggaggacgag
gaggacgccaccggtccgccactcaccgccgacagcagcgatgtgaccgcgtacccgcat
cactctgccatggcggcctccaggccggcggccgcggtgtctgctgccaggagaagtatg
acgcgtgtctcggcggcctcctgcctggagaacccgtgttccaacgggggaacctgtgtg
gacggggaaccggcgaggtgcttctgcctgagcggttacgggggagacttgtgccagaca
gacctggagctgtgcgagtccggctgggacaagtttcagggcttctgctaccgccacttc
tccaagaggcagagctgggaggcggcggagcagcactgccgcctgagtggaggacacctg
ctgtccgtcatgacgcccgaggagcaggaccacgtcaacgacaaatacaaagagtaccag
tgggtgggactgaacgaccggaccatcgagggagacttccgctggtcggacggcagccct
ctgctttacgagaactggtaccgcggtcagccggacagctacttcctgtcgggggaggac
tgcgcggtgatggtgtggcacgacggcggccgctggagcgacgtgccgtgcaactaccac
ctgtcctacacctgcaagaagggcgtgtcgtcctgtagcgagccgcccagtgttcccaga
gcgaaggtgttcgggaagaagcggctgcgttacgagaccaacaccaaggtgcggtactac
tgtgagggcggttatgtgcagagaaggaatcccgtcatcaagtgtctgcccggcggccgt
tgggaagagcctcagatcacctgcatccccactcgttccatggaaggagacgcggtcacc
tcacttcctcaccagcaggaggtcacgcagaaagcggcaccgctcttctgggacattgcg
tggaacgtctga
DBGET
integrated database retrieval system
