Clinocottus analis (woolly sculpin): 137781206
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Entry
137781206 CDS
T10471
Symbol
ddx61
Name
(RefSeq) probable ATP-dependent RNA helicase ddx6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137781206 (ddx61)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cana03019
]
137781206 (ddx61)
03036 Chromosome and associated proteins [BR:
cana03036
]
137781206 (ddx61)
Enzymes [BR:
cana01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137781206 (ddx61)
Messenger RNA biogenesis [BR:
cana03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
137781206 (ddx61)
mRNA degradation factors
5'-3' decay
Decapping complex
137781206 (ddx61)
Chromosome and associated proteins [BR:
cana03036
]
Eukaryotic type
Gene silencing
piRNA pathway
137781206 (ddx61)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CMS1
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
137781206
NCBI-ProteinID:
XP_068425912
LinkDB
All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MATARTANPAPMIGLNKPANGQLRGQMGLLAPAQQPNAIQKRTGIPQSSGGIKFGDDWKK
CLELPPRDTRMRTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPVQEESIPIALSGR
DILARAKNGTGKSGAYLIPLLERIDLKKDHIQAIVMVPTRELALQMSQISIQLSKHLGGV
KVMATTGGTNLRDDIMRLDETVHVVIATPGRILDLIKKGVAKMDKAQLIVMDEADKLLSQ
DFVVLIEDIISFMPKDRQILLYSATFPISVQKFMSKHLKKPYEINLMEELTLKGITQYYA
YVTERQKVHCLNTLFSRLQINQSIIFCNSTQRVELLAKKITQLGYSCFYIHAKMMQEYRN
RVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLA
INLITSEDRYNLKNIEDQLVTDIKPIPSCIDKSLYVAEFHSVDPDADDDDGGGAKSKELG
AI
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggctactgcaaggacagcaaacccagcaccaatgattggattgaacaaaccagcaaat
gggcagctcagaggacagatgggactcctcgcacctgcccaacagcccaatgccatccag
aaaaggaccggcattcctcaaagcagtgggggcattaagtttggtgatgactggaagaag
tgcctggagcttcctccaagagacaccaggatgagaacttcggatgtgacatcaactaag
ggaaatgaatttgaagactactgcctaaagcgggaactgcttatgggaatctttgaaatg
ggatgggagaaaccgtcccctgtccaggaggaaagcatccccatcgctctgtcaggcaga
gatattttggctcgggccaagaatggcacaggaaaaagtggtgcctacctcatccccctt
ctcgagaggatagatctgaagaaggatcacatacaggccatcgtgatggtgccaacaaga
gagttggccctgcagatgagtcagatcagcattcagctcagcaagcacctgggtggtgtc
aaagtcatggctaccacgggtggcaccaatttgagggatgacatcatgcgtctggatgag
acagtacatgtagtgattgctactccaggcaggatactagaccttatcaagaagggtgtg
gcaaaaatggataaggcccaattgattgtgatggatgaggcagataagctgctttcccag
gactttgtggtgctgatagaagatatcatcagcttcatgccaaaggatcgtcagattctg
ctttactctgccacttttcccatcagtgtgcaaaaattcatgagtaagcacttgaagaag
ccttatgagatcaacctgatggaggaactgaccttgaagggcatcactcagtactatgcg
tatgtgacagaaagacaaaaggttcactgtctcaacacactgttttctaggcttcagatc
aatcagtcgatcatcttctgcaactcaacccagagggttgagcttctggccaagaaaatc
acccaacttgggtactcatgcttctacattcatgcaaagatgatgcaggaatacaggaac
cgtgtgttccatgacttcaggaatggattgtgcagaaacctggtctgcacagacctattc
actcggggaattgacattcaggcagtaaatgtggtcatcaactttgacttccccaaaaat
gcagagacctaccttcaccgcattggaagatcaggacggttcggtcatctgggtctggcc
atcaatctgataacttcagaagatcgctacaacctgaagaacattgaggatcaactggtc
actgacattaagcccatccccagttgcattgataagagcctgtatgtggcagagtttcac
tcagttgacccagatgcagacgacgacgatggcggtggagccaaaagcaaggaactggga
gcaatctga
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