Clinocottus analis (woolly sculpin): 137781571
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Entry
137781571 CDS
T10471
Symbol
prdm1a
Name
(RefSeq) PR domain zinc finger protein 1a
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
cana Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cana03000
]
137781571 (prdm1a)
Transcription factors [BR:
cana03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
137781571 (prdm1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-C2HE
FOG1-like_PR
B129_C2H2-zf
Motif
Other DBs
NCBI-GeneID:
137781571
NCBI-ProteinID:
XP_068426521
LinkDB
All DBs
Position
Unknown
AA seq
847 aa
AA seq
DB search
MCGWDQSYTATSHSSAMLTSEGAHAMEQDDAHHGAKMASTATTSSGSDAAVTTTTTTTTK
TTMVDTNVDMEEADMTCWTEAEFEEKCTYMVKDTAWEATPDDESTTTTRAEASLPRNLAF
KHPADGKEVVGVCSREYIPKGTRFGPLVGEIYTADSVPKDANRKYFWRIYEERDFHHFVD
GLDETRSNWMRYVNPAHSAAEQNIAACQNGMEIYFYTVKPVPAGAELLVWYCHDFARRLH
YPPSGELMMQKLKQSLLEVKQQQVSSEERLVEACSPSPVAVTPTPPKREHSVLSILRGTS
SSVSSSSVKREPSRPLPTRPRCGDSPDRPLYPRALYPPALRPHPHVPEDFLGHKPVQLGY
PATRSPGGHSSATPSPSARSSPDSSPQGSPSGPASFYPPGLGSYPGYSPPFTPLSSSFYP
PGAPYSRYLLPHPYPLPGGGVPTVGGIFPRMYSSLLPPHVPLLPSDTAGRRFLMPDHVHP
ASISAHRDFLLPRSTSAFQAATSLKDKAGPHHPYSGHPHPHRPAHIPCSGSPPAGTASPN
ERMPTKPTSALLGNASEHCSDDEAVNLSKVKRGPGSAGYKALPYPLKKQNGKIKYECNVC
SKTFGQLSNLKVHLRVHSGERPFKCQTCNKGFTQLAHLQKHFLVHTGEKPHECQVCHKRF
SSTSNLKTHLRLHSGEKPYHCKLCPAKFTQFVHLKLHKRLHSRERPHKCPHCHRHYIHLC
SLRLHLKGYCPAVTSPDASEELQRANEEIERFDVSEHAEQLEQLQGGAEVEAVLEKQVLG
LLWREPDLKSSHFHPHHKGGASDLLSAGYAASYESPNETSVIKMRHGGSVLSLPANVTVK
QESEELA
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggatgggaccaaagttacacggcgacctctcatagctcggccatgttgaccagt
gagggggcgcacgccatggagcaggatgacgcgcaccacggagccaagatggcctccacc
gccaccaccagctccggctcagacgcagctgtgacgacgacgacgacgacgacgacgaag
acgacgatggtggacacgaacgtggacatggaggaggcggacatgacctgctggacggag
gcggagttcgaggagaagtgcacgtacatggtcaaagacacggcgtgggaggccacgcca
gacgacgagagcacgacgacgaccagggccgaggcgtcactgccccgaaacctggccttc
aaacacccggctgacggaaaggaggtggtcggagtgtgcagcagagagtacatccccaaa
ggaactcgcttcggtcccctggtgggcgagatctacacggccgacagcgtccccaaagac
gctaatcgcaaatacttctggaggatctacgaggagcgggacttccaccacttcgtcgac
ggtctggatgagactcgctccaactggatgcgctacgtgaacccggcccactcggcggcc
gagcagaacatcgcggcgtgccagaacggcatggagatctacttctacacggtgaagccc
gttcccgccggcgccgagctgctcgtctggtactgccacgacttcgcccgacgtctccac
tacccgccgtccggagagctgatgatgcagaaactcaagcagtctctcctggaggtcaag
cagcagcaggtgagcagcgaggagcgtttggtggaggcctgcagcccgtcccctgtcgcg
gtgacgcccacgccgcccaagagggaacacagcgtcctctccatcctccgcggcacctcc
tcctcggtctcttcgtcgtccgtgaagagagagcccagccggccgctccccacccgcccg
cgatgcggcgacagccccgaccggcccctgtacccccgcgccctctacccaccagctctc
aggccccaccctcacgtccccgaagacttcctcggccacaagcctgtccagctcggttac
cccgcgacccgttcccctggcggccactcctcggccacacccagcccgtcggcgaggagc
agcccagacagcagcccccaggggagcccctcgggtccggcttctttctacccccccgga
ctgggctcttaccccggttactccccgccatttacccccctctcctcgtccttctaccct
ccaggcgccccttactcgcgctacctccttccccatccctaccctctccccggcggtggc
gtccccaccgtaggaggaatctttcccaggatgtacagcagcctcctgccccctcacgtg
cccctcctgccctccgacacagccgggaggcgcttcctgatgcctgaccacgtccacccc
gcctccatctctgcccacagagatttcctcctcccccggtccaccagtgccttccaggcg
gccacctctctgaaggacaaagcggggcctcaccacccgtactcggggcacccgcacccg
cacagacccgcccacatcccctgcagcggctcccctccggcgggcacggcgtcccccaac
gagcggatgcccaccaagcctacctcagccctgctgggcaacgccagcgagcattgctcc
gacgacgaggccgtcaacctgagcaaggtgaagcgcggcccgggctcggcgggctacaag
gcgctgccgtacccgctgaagaagcagaacggcaaaatcaagtacgagtgcaacgtgtgc
agcaagaccttcggccagctgtcgaacctgaaggttcacctgcgagtccacagcggagag
aggcccttcaaatgtcagacctgtaacaaaggcttcacgcagctggctcacctgcagaaa
cacttcctggtccacaccggggagaagccacacgaatgccaggtttgtcacaagcgcttc
agcagcacgagcaacctgaagactcacctgcgcctccactcgggggagaagccctaccac
tgcaaactctgcccggccaagttcacccagtttgttcacctcaagctgcacaagcgcctg
cactcccgcgagcgcccgcacaaatgcccccactgccaccgccactacatccacctgtgc
agcctgcggctccacctgaagggctactgcccggcggtcaccagcccggacgcctcggag
gagctgcagcgcgccaacgaggagatcgagcgcttcgacgtcagcgagcacgccgagcag
ctggagcagctgcagggcggggcggaggtggaggccgtgttggagaagcaggtcttgggt
ctgctgtggagggagccggacctcaagtcctcccacttccacccccaccacaagggcggc
gccagcgaccttctgtccgcgggctacgccgcgtcgtacgagtccccgaatgagacgtcg
gtcatcaagatgcggcacggcggctccgtcctgtcgcttcccgccaacgtcaccgtgaag
caggagtcggaggagctcgcatga
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