Clinocottus analis (woolly sculpin): 137781766
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Entry
137781766 CDS
T10471
Symbol
cicb
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
cana Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cana03000
]
137781766 (cicb)
Transcription factors [BR:
cana03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
137781766 (cicb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
KOW6_SPT5
Motif
Other DBs
NCBI-GeneID:
137781766
NCBI-ProteinID:
XP_068426827
LinkDB
All DBs
Position
Unknown
AA seq
2780 aa
AA seq
DB search
MRPLKKHRGRSPPLTRGRGGRRRGASQALQEKDPKRVKREPLVKTTELTPSSPTSKQISH
TAVNSHEEPTTNSNTPTREEPTELRKPVESVEREEKKMEEKTEKEKMVGTNGNKTVSTGT
VAFPTSTPMPLTTATPPLAPNHNPILGSVSSRKTATFKARVPKKKYTYEHFANNASSLTT
ISTSSPALIHNTYCNIHSRISDSLNTPYNNFKSSNNISKSINFRINSSTKSNTTSGINTM
TNLSAGSHNTLINSSNSRSNNCSGNQPSVLIVDSKVPEAKHVVSTEDKTLRTAESQEKDS
LARENESEGTPNSVRSSSTDTASEHSADLDGTETTGPSLHQKNSRYSAPLHNSHHKEARH
SEGLTEALAKGMKNQRVLARQVKRPIESGVGATGNRGVKEIDSCLLSPVFRPGVVRRVSG
GTVEVQLQEEETLVKYPFHGGTVMTSSSGAESTVEFILDAPPPGMAPVAVRTRVCVPFGG
EEGGPLLYREGIITQVDPHPGVSFPYQVLLGEDRETLENVQAGEKEEKRKANANSQAVWV
SRQSLRLLTPPWEVPHLDGGRAQEREREREREERERREEMEVEREVCQLSIGMGVLGGGA
RLGHGFSHEGVAGGHPYNNAHPASHSSIVTSGVAGSTVHDSGENYSGRERQDQPNTPEED
VEVSRFNMALTVSPKTDAGLSQHRNIISKSSGYPPISPHLSVVQGLGPPQLSTLAGPQPP
RSPALLGSEISKTTPSLPLSKSTPTQTPTPTSTSSRSRTPLSLAQQKYKKGDVVCTPNGI
RKKFNGKQWRRLCSREGCMKESQRRGYCSRHLSMRSKEMETTGGGGGGSSSGTVTPDLRG
RASSEFEWDDTSRESSETSSRGDSRPRLVLPSLLPHDLSSRFDFDECEAASMLVSLGSSR
SGTPSFSPISTQSPFSPAPSPSPSPLFGFRPANFSPITASPVLQPRRHRQPSGTGGAGAG
GSKVTTPAGGGERERHSSGIQSSFHSNLMFTVPMSPSKRKPDTLPPPPLPSHHHDYTPKT
ELEQGDLNNSFRVLSPQTPASHSRTHTPTFSRPRGVSTPTSSRPPSSTAVSPPPLLVSPT
PPSPLTPDVGPRRVVPVSQQALRDSPVIVRNPEVPLAKFTECPLERGGGGGNEGGTDKTS
SKDIGLAPLTPQPISGIQVPVPINAAAATVPNGTVLLRSPAQTLVLVSPTPSSLPTPVTP
LQALSVTVSTTVTAPAPSSTDTCVEREENRETGFGGEVQQPVPCHPSPTALLPLILPAES
LHPAPRKDIIMGRPGTVWTNVEPRTVPIFPWHSLVPFLAPTQSDASSQPGEGQHPVNHPQ
AVSLKTECQGVAALSQQSAEAPPNVERAPPPRPPPSSDELPPEKEKGDAERERPDSETES
DVDDLFLPSVVPEQPLSISPVKRRTQSLSALPKDGDKSSPGKREKDHIRRPMNAFMIFSK
RHRALVHQRHPNQDNRTVSKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNK
DRKKSSSESRGVPGGKDIRERSMSESTEPHSVELKGVGPGLAGVSERNTGEGHVGQLTRP
RAFSQSAMHSLERSDRGNTQALAELAQMCGDGGSQFSSHAPPPSQSQRGVSEDMTSDEER
MVICEEEGDDDVIEDPYPSSSIDLKCKERVTDSDSETGSGDESDRKRVFAPVICSSALSS
SSHHSPHVRSVSLSSYPSSKRYDEGRSGGGGFSDHRRKERGEADSKDTFGGDGRGGGGGG
VQVTSLSLTSGQSVMSTSSAGGHLSPSAGSLGVYQHMGIGAVRVASTVVTNVMRPVISTP
LPIASRTRDGGTSSPHPPERKSLTPHQQPQLLIGSGSGGGIPATGGGYYSSSPNPLGAGI
GPGGVVTNLVLGGALSAQPALQLLTPSHHHHPSQHQAFSSSAVSVPHGQTNGPLPLSLLQ
PQFLPASSLASPGGKAITQVQYILPTLPANTNPKSPTQQLSQPTSIFNLPTAPPTHISLV
NGRQQGTSSLTGYSSSSAVGVVGPGTRVQTQSPVLQGKMFVPMATVRTAPVTSQQVPIAT
PPLPVQNGAQTGSKIIQIAPMPLVQSQLPHGGAVHTSSPFPVTVGTAAVVAPGSSPSQAV
LLPPPPTRITYVQSTPGVTSTLPLVSTTTGSSTTQQALPVPGSAYVPSPLATLGFTAIAP
PGQTLVQPVIAGQPPLLATAQAPQPSTAAPAIGSGGQIVTAIYPSSPSVTMATGVVSMTA
VPPSVVYSISGPSTVSPHILSKHTATPSTIAHPHPQPYLDRQADRHLPPDRPAERQADRL
AERQTELLTHSDRHLERQTSSSCGSVAPPSGSAVSTRPCSPLPVQTPGSAPGTPKLTQLP
VRTPQKVKAMLANIPVGSYEGGSRGKERERERERERDRERDRERERDRERERDRERERDR
ERERDREKERDREKERDREREREKDRERDRERVDAATSRFSFDAELTGQTGSPSTHPAEE
PLSSDRPLEGSSAADSFETQHRESTTTKEGGWKESLPSSPPPPPSATELTLPPPQADKDG
PPPKKIRTRPPPLKKTFESVDKSGRVLSEVYFEERFAELPEFRPEEVLPSPTLQSLATSP
RAILGSYRRKRKNSTDLDSATDEQVSPKRKSRRRSSCSSEPNTPKSAAKCEGDIFTFDRA
ATDGEDILTDMEFDKVPYSSLRRTLDQRRALVMQLFQEQGFFPSAQATAAFQTRYSDIFP
TKVCLQLKIREVRQKIMQTAAPSDVSALGIPDSMGPLPGPSGSQSGEGSMRGGGDLQDED
VEHGTEGSPEDPRDSQDSSR
NT seq
8343 nt
NT seq
+upstream
nt +downstream
nt
atgagaccattaaagaagcacagagggcgttctcccccgttaaccagaggtagagggggg
agaaggagaggggcctctcaggcccttcaagaaaaagaccccaaaagagtcaagagggaa
ccactcgtcaaaaccacagagcttacacccagcagtcccacaagcaaacagatctcgcac
acagccgtcaactctcacgaagaaccaaccacaaacagcaatacccccacgagggaggag
cctactgagctgaggaaacctgtggagtcggtcgagagggaagagaaaaaaatggaagaa
aagacagaaaaggaaaaaatggtgggcacaaatggaaataagacagtgtccactggtact
gtagcatttcctacctctaccccaatgccactcaccacagccacgccccctctggcccct
aatcacaaccccattttaggctcagtctcgagtaggaaaacagccacatttaaggctcgt
gtacccaagaaaaaatacacttatgagcactttgcaaacaatgcaagtagcctgactacc
atttctacctccagccctgcactcatacacaacacttactgcaatattcacagcagaatc
agtgatagtttaaatacaccctataataatttcaagagtagtaacaatattagtaaaagc
attaattttcgtataaatagtagtactaaaagtaacactacaagtggtattaacaccatg
actaatcttagtgctggtagccataatactcttattaatagcagtaatagtagaagtaat
aattgctcaggtaatcagccgtcagtgctaattgtggacagcaaagttccagaagcaaaa
catgttgtttccacagaggataaaaccctcaggacagcagaatcacaggaaaaagattcc
ttagctagggagaatgaatcggaggggacccctaactcagtgcgctcttcgtccactgat
actgcgagcgagcactcagctgacctggacggaacagaaacaacaggaccaagccttcat
caaaagaactcccgctactcggctcctctccataactcgcaccataaagaggccaggcat
tcagagggactcactgaagctctggccaaaggcatgaaaaaccagagagttcttgctcgc
caggtaaagaggcccatcgagagtggtgttggggctacaggcaatcgaggggttaaggaa
attgactcctgccttttatcacctgtgttcagaccaggggtggttcgtagagtaagtgga
ggtactgtagaagtccaactccaagaagaggagacccttgttaaataccctttccatggt
ggaaccgtgatgacatcgtcctccggggctgagagcaccgtggagttcattttggatgcc
ccccctccaggtatggcacctgtggctgtcaggacccgggtgtgcgtgccctttggggga
gaggaggggggtcctctgctgtacagagaggggattatcactcaggtggacccccatcct
ggcgtgtcttttccttaccaggtgctcctgggtgaagacagagagactctggaaaatgta
caggccggggaaaaggaagagaaaaggaaagctaatgctaactctcaggctgtgtgggtg
tcccgacaaagtctgagactgctcacccctccttgggaggtcccgcatttggatggtggg
agagcacaggaaagagagcgagagagggagagagaggagagggagcggagggaggagatg
gaggtagagagggaagtgtgccagttaagtattgggatgggggtgctgggaggtggggcg
aggttaggccatggtttttcacatgaaggagttgcaggagggcatccctataacaacgca
catccagcatctcattcctccatcgtgacgtctggtgtagccggcagcacagttcacgac
agcggagagaactactctggcagagagaggcaggatcagccaaacactccagaagaggat
gttgaggtgtctcgttttaatatggcgctcactgtcagccccaaaacagatgctgggctc
tctcagcacagaaacatcatctccaagtccagtggctacccccccatctctccccatctc
tctgtggtgcaaggtctgggacccccacagctctccaccctcgctggaccccagccgccc
cgttctcctgccctactggggtctgaaattagcaagaccactccaagcctacctctatca
aagtccactcccactcagacccctactcccacttctacctcctctcgctccaggactccc
ctctcattggctcagcagaaatacaagaagggcgatgtggtgtgcacgcctaatggtatt
cgtaagaagttcaacggcaagcagtggaggaggctgtgctccagggagggctgtatgaag
gagtctcagcggcgaggatactgctcaagacatttgtccatgaggtccaaagagatggag
acaacagggggagggggagggggcagcagctcagggacggtcacccctgacctgcggggg
agagcaagcagtgagtttgagtgggacgacacgtccagagagagcagtgagaccagtagc
agaggagactctagacctcgcttagtcctcccctctctcctcccccatgacctgtcgtca
cgctttgactttgacgagtgtgaggctgcctccatgctcgtgtcattagggagctcccgc
tccggcacgccctccttttctcccatctccacccagtcgcccttctcccctgccccctct
ccctcaccttctccgctgttcggcttcaggcctgccaatttctccccgattaccgcgtcc
ccggtcctgcaaccccggaggcacaggcagcccagcgggacggggggagccggggcaggg
ggcagtaaggtaacaacaccagctggaggaggagaacgggagagacactcctcaggtatc
cagtcctctttccacagcaacctcatgtttacagtcccaatgagccctagcaaacgaaag
cctgacacacttcctccaccacctctcccgtcacaccaccacgactacacacctaagaca
gagctggagcagggggacctgaacaactctttccgggtgctgtccccgcagacaccagct
tcacattcccgcacacacacacccaccttctcccgacccaggggagtcagcacccccacg
tccagtaggccaccgtcctccactgccgtttcccctcctcctctgctggtatctccaact
cccccttcccctctcactcccgatgtagggcctcgtcgtgtggtccctgtatcccagcag
gccttgcgggactcccctgtcattgtgaggaatcctgaagtcccgcttgcgaaatttaca
gagtgtcccttggaaagaggaggaggaggcggaaacgagggagggacagataaaacctca
tctaaagacatcggcttagcacctctcacccctcaaccaatttcaggcatccaggttccc
gtccccatcaacgctgctgcagccacagtacccaatggcaccgtcctcttgcggagcccg
gcccaaactttagtgcttgtgtccccaacaccgtcctccctgcccacccctgtcacccca
ctgcaggccctgtcagttaccgtcagcacaacagtcacagctccggctccgagtagcacg
gacacctgcgtggaacgagaggagaacagggagaccgggtttgggggtgaggttcagcag
ccagttccctgtcacccttctcccaccgctttgctgccgctgatcctgccagctgaaagc
cttcaccccgctccacgcaaggacatcatcatgggacgtcctggcacagtatggaccaac
gtagagccacggacagttccaatcttcccctggcattcattggtccctttcctggcaccc
actcaatcagatgcttcttctcagccaggagagggccagcacccagtcaaccacccccaa
gcagtcagtctgaagacagagtgtcagggggtggcagcgctgtcacagcagtctgcagag
gcacctcccaatgtagagagagctcctccaccccggcctcccccctcttccgatgagctg
cctccagagaaggagaaaggagatgcagagagggagaggcctgacagcgagacagagagt
gatgtggatgacctcttcctcccatcagttgtaccagagcagcccctctctatatcacca
gttaagagacgcactcagtcccttagtgcgctgcccaaagatggagataagagcagccct
ggaaagagggagaaggaccacatccggcgaccaatgaatgcattcatgattttcagtaag
cgccatcgagcattggtgcaccagcggcacccgaaccaggacaacaggactgtcagcaag
attcttggggagtggtggtatgctcttggaccaaaggagaaacaaaaataccacgatttg
gccttccaggtaaaagaggcccactttaaggctcacccggactggaaatggtgtaacaaa
gacaggaagaagtccagctcagagagccgtggggttccagggggcaaagacatcagagag
agaagcatgtctgagtccacagagccccattctgtggagctgaagggggttggtccaggt
ctggcgggcgtgtctgagaggaacacaggagaaggtcatgtaggtcagcttacccgtccc
agagccttctctcaaagtgccatgcacagcctggagcggagtgacaggggaaatacacag
gcccttgcagaactggcacaaatgtgtggggatggtggcagtcagttttcaagtcatgcc
ccgcccccgtcacagtcccagaggggggtcagcgaggacatgaccagtgacgaggagcgc
atggtcatttgtgaggaggagggagatgatgatgtcattgaggacccttatccgagcagt
tccatagacctcaagtgcaaggagcgggtgactgacagcgacagtgaaactggttctgga
gacgaaagtgatcgaaagagagtttttgctccagtcatttgctcctctgcattatcatct
tcctcacaccatagccctcatgtcaggagcgtctcactgtcctcttacccgagcagcaag
cgttatgatgaggggagatcagggggaggagggttttcagatcacaggaggaaggaaaga
ggagaggcagatagtaaggacacatttgggggagatgggagaggagggggaggaggagga
gtgcaagtcacctctctctccctcacctctggccagtcagtcatgtccacttcttcagct
ggagggcatctttccccatcagcaggttccctgggggtgtaccaacacatggggattggc
gccgtaagggtggcgtctacggtggtgaccaatgtaatgcgtcctgtcatcagcacgccc
ctcccaatcgccagcagaaccagagatggaggcacatcgagcccgcatccgcctgagagg
aagtccctgactccccatcagcagccacaacttctgattggttcaggatcaggaggaggg
attccagccacagggggtgggtactactcttcctcacctaatcctttaggtgcaggcatt
ggccctggtggtgtcgtgactaatttggtgttaggaggggctctgtctgctcaacctgct
ctacagctcctcacaccctcccaccaccaccatccctcccagcatcaggccttttcctcc
tccgctgtttcagtaccgcatggccaaaccaacgggcccctgcctctgtccctgcttcag
ccccagttcctccctgcctcttctctagcgtcccctgggggtaaggccatcacgcaagtt
cagtacatcctgcccaccctacctgccaacaccaaccccaagagtccaactcagcagctc
agccagccaaccagtatcttcaacctgcccacagctccacccacacacatatccctggtc
aatggaaggcagcaggggacaagttcactgacgggatattcgtctagctcagcagtggga
gtggtcggccctggaactagagtgcaaacacagtctccagtgctccagggcaaaatgttt
gttcccatggcaacagtacggacagcaccagtcacttcccagcaggttcccattgcgact
ccgcctcttccggtccagaacggtgctcagacgggaagcaagatcatccaaatagctccg
atgcctttggtccagtcccagctccctcacggtggagcggtacacacctccagccccttc
cctgtcacggtgggcacagctgctgtggtggctccaggatcgtccccctcccaggctgta
ctgctgccaccacctcctaccaggatcacctatgttcagtccactccaggggtcacatcc
actctgcctctggtctccacgacaacaggctcttccaccacccagcaggccctgccggtg
cccggatctgcatatgtgccatctccattggcaacacttggattcacagctatcgcacca
ccgggtcagactctggttcagccagtgattgcaggtcaaccaccactcttagccacggct
caggctccacagccctccaccgcagctccggccatcggctccggaggccagatagtcacc
gccatctacccttcttcacctagcgtcaccatggcaacaggggtcgtctctatgacagcg
gtaccccccagcgtggtctactccatctccggcccttccaccgtttccccccacatcctg
tccaagcacacagcgacccccagcacaatcgcacacccgcatccgcagccctatctggac
agacaggcagacaggcacctgcctccggacagacctgcagagcgacaggctgaccgactg
gctgagaggcagacagaactgctgactcattcggacaggcacctggagaggcagacctcc
agcagttgcggctcagtggcacctccaagtggttcagctgtgtccacaaggccctgcagt
cctcttccggtccaaacacctggcagtgcaccaggtacaccgaaactaacccagcttcca
gtcaggacccctcagaaggtgaaggcaatgctggcaaacattcccgtaggcagctatgaa
ggaggaagccgaggaaaggagagagaaagggagagagagagggaacgagacagggaacga
gacagggaaagggagagagacagggaaagggagagagacagggaaagggagagagacagg
gaaagggagagagacagggaaaaggagagagacagggaaaaggagagagacagggaaagg
gagcgagagaaagatagggagagagatagggagagagtagatgcagccaccagtcgcttc
tcctttgatgctgagctgacagggcagacggggtctccatcaacacaccctgcggaggag
ccgctgtcctctgacagacccctggagggctccagtgcagcagactcctttgaaacacaa
cacagagaaagcacaaccaccaaagagggtggatggaaggagtccctaccctcctcccct
ccaccccctccatctgccacagaactgaccctgccccccccacaggcggacaaagatggt
cctccacccaaaaaaatcagaacccgcccaccgcctcttaagaagacttttgaatcagta
gacaagtcgggcagggtgctgtcggaggtgtatttcgaggagcgctttgctgagctgcca
gagtttcggcctgaggaggttttgccgtcacccaccttgcagagtctcgccacttcgccc
cgcgcaattctgggaagctatcgccgcaagaggaagaactctacagatttggactcggcc
actgacgagcaagtgtctcctaagaggaagagtcggcgacgctcgagctgcagctcggag
cccaacacgccaaaaagtgccgccaagtgtgagggagatattttcaccttcgacagagca
gccacagacggagaagacatccttacagatatggagtttgacaaggtgccatactcctcc
ctgagacgaactctggaccagaggcgagcgctggtcatgcagctgttccaggagcagggc
ttctttccgtcagctcaggccactgcagccttccagacaagatactcggatatatttcct
accaaggtgtgtctgcagctgaagatcagggaggtacggcagaagatcatgcagacggcc
gccccctccgatgtctctgctttaggcatccctgactcgatgggccccctccctggacct
tctggctcccagtcaggagaaggatccatgaggggaggtggggacctgcaggatgaagac
gtggagcacgggacagaggggagcccagaggatcctcgggattcacaggactcttccaga
tga
DBGET
integrated database retrieval system
