Clinocottus analis (woolly sculpin): 137782202 Help Entry 137782202         CDS       T10471                                  Name (RefSeq) collagen alpha-1(XI) chain-like   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism cana  Clinocottus analis (woolly sculpin) Pathway cana04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cana00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     137782202  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:cana00536]     137782202 Glycosaminoglycan binding proteins [BR:cana00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    137782202 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Laminin_G_2 Laminin_G_1 Laminin_G_3 Motif Other DBs NCBI-GeneID:  137782202 NCBI-ProteinID:  XP_068427484 LinkDB All DBs Position Unknown AA seq 1819 aa AA seqDB search MEMQRWTTRWKTKGWLWDSTLVAAVTLLLILQAANVRAVDQVDVLKALDFQSSPEGVRKT TGFCTVRRGSKPDIAYRVGKQAQISAPTKQLFPGGVFPEDFSILFTIKPKAGLQSFLLSV YNQQGIQQLGVEVGRAPVFLYEDQHGKPAPEEYPLFRSINLADGKWHRVAISVEKKSVTI IVDCKKKVTRPLGRSDQAAINTEGITVFGTRILDEEVFEGDIQQLLIVADPKAAHDYCEH YSPDCETPNHHDTPQAQQAEDEYTNYEYGEFYDYNEEAVATDAPPTEGPKTETNVGGDYY PGEYDYTTVDGSQPETPTDTTSQGQNYDGEIVDDYITGVEQVGADPTTAVETAAPVDPQE KVDPATDVYEFKEYDLKEYDHKEIVEKPYEYGDYGDYGPTDAKPTSEDEFGPGVPAETDI RESNVGGGQSYLGEKGEKGEPAVIEPGMLIEGPQGAPGQAGLPGTPGLQGPPGPVGDHGE RGPRGRSGIPGSDGIPGPPGTILMLPFRAGGESHKGPVVSAQEAQANAILSQARLAQKGP PGPAGMTGRSGPVGGPGSAGLKGDSGDSGPQGPRGLQGSSGPPGKAGKRGRNGADGARGM PGEGGSKGDRGFDGLPGLPGEKGHRGEYGSSGPPGSPGEDGPRGEDGQVGQRGVAGESGP RGLLGPRGSQGPGGQRGLPGLDGQAGPKGNLGPQGEPGPSGQQGMTGPHGLIGPQGPIGP PGEKGPQGKQGLAGLTGADGPPGHPGKEGPAGEKGTVGFPGPMGSIGYPGPRGVKGAEGI RGLKGGKGEKGEDGFPGFKGDMGLKGDKGENGVFGPRGEDGPEGPKGKSGPNGEIGPLGS AGEKGKLGVPGLPGYPGRQGSKGSNGFNGFPGANGEKGARGLAGKAGPRGQRGPTGPRGG RGARGPTGKPGAKGTSGNDGPGGPPGERGPQGPQGPVGFPGPKGPNGPPGKDGLPGHPGQ RGETGFQGKTGPPGPGGVVGPQGPTGETGPSGERGHPGSPGPPGEQGLPGAAGKEGGKGD PGSQGPGGKAGPAGLRGFQGTRGLPGAMGPAGLKGGEGPQGPPGPFGSPGERGAAGPGGP IGLTGRNGPQGPPGPAGEKGGPGEKGPVGPAGRDGIQGPVGLPGPAGPQGPPGEDGDKGE VGGPGQKGSKGDSGELGPPGPSGLQGVVGAPGPAGTDGESGPRGQQGMFGQKGDEGARGF PGLPGPLGLQGLPGPPGEKGENGDVGAMGPPGPPGPRGPQGSSGASGPQGPSGGIGAMGG VGEKGENGEAGNPGPSGEPGIGGSRGETGEKGETGPPGAAGPAGARGPPGDDGPKGNPGP VGFPGDHGPPGEPGAAGLDGLSGDKGDDGDAGQPGPPGPSGEAGVPGPPGKRGPLGSAGP EGRQGEKGSKGETGAEGTVGKTGPVGPQGPAGKAGPEGLRGIPGPVGEQGLPGASGQDGP PGPLGPTGLPGMKGDSGGKGEKGHPGLIGLIGPPGESGEKGDRGLPGLQGTAGGKGDAGI VGSYGPLGPPGPPGISGPQGQKGSKGSDGSTGQKGDTGLIGPPGQPGPPGDVIQPLPIQQ SRKTRRHAEMQGDEAMADYSVDGVGMEGMEDVFGSLNNLKQDIERMKFPMGTQDNPARTC NDLHLSQPDYADGEYWIDPNQGCIGDSIKVFCNFTAGGETCIHPDKKSTGVRISNWPKES PGSWFSEFKRGKILSYVDMAENTINTVQMTFLKLLSSSARQNFTYICHQSAAWYDAKADN YDKAVRFLGSNDEEMSYDNNPFIRPLMDGCSLKQGYSKTVMEINTPRIDQLPIIDVMLND FGESNQRFGFEVGPVCFLG NT seq 5460 nt NT seq  +upstreamnt  +downstreamnt atggagatgcaaaggtggaccaccaggtggaaaacgaaaggatggctatgggattcaaca ctagtcgctgcggtcacattacttttaattctacaagctgccaatgtcagagcagttgat caagtagatgtactgaaggctctcgacttccaaagctctcccgaaggagtacggaaaacg acaggcttctgcacagtccggagaggatccaaacccgacatcgcttacagggtgggaaaa caagctcagatcagcgctccaaccaaacagctcttcccaggaggagttttccctgaagat ttctccatcctgtttaccatcaagccaaaggctggccttcagtccttcctgctgtctgtg tacaaccagcaaggcatccagcagctgggtgtggaggtgggccgtgccccggtctttctg tatgaggaccagcatggcaagcctgccccggaggagtaccccctcttccgctccatcaac cttgctgacggcaaatggcatcgtgtagctatcagcgtggaaaagaaaagtgtcaccatc attgtggactgtaagaagaaggtgaccaggcccctcggcagaagcgaccaggccgctatc aacacagaaggcattactgtctttggcaccagaattctggatgaagaagtctttgagggt gacatccagcagctgctgatagtggcagaccccaaagcagcccatgattactgtgaacac tacagccccgactgtgaaacccccaaccaccacgacaccccccaggctcaacaagctgag gacgagtacactaactatgaatatggtgagttctatgactacaatgaagaagcggtcgcc actgatgctcccccaactgaaggacccaagacggagacaaatgtgggcggagattactac ccgggtgagtatgactacaccacagtggacggaagtcagcctgaaaccccaacggatacc acaagtcaaggccagaactatgacggggaaattgtggatgattacatcaccggtgtggaa caggtcggggcggatcccactactgctgtggaaaccgctgccccagtggacccccaggag aaggtggaccctgccactgacgtgtatgagtttaaggaatacgacctgaaggaatatgac cacaaagagattgtagagaagccatacgaatatggtgattatggcgattatggccccact gatgccaagcctacatctgaggacgagtttggtccgggtgttccagcggagacggacatc agagagagcaacgtgggtggaggtcaaagttacctcggagaaaaaggagagaagggtgaa cctgccgtcattgaacctgggatgcttatagaaggaccccaaggagcccccggccaagca ggtcttcctggtaccccaggattgcagggtcctccaggtcccgtaggagatcacggtgag aggggtcctcgagggcgttctggtattcctggttccgacggtatccccgggcctccaggt accattctgatgcttccattccgtgctggcggtgagtcacacaagggacctgtggtctca gcccaggaagctcaggcgaacgccatcctttctcaggctcggctggcacagaaaggtcct ccagggccggcgggcatgacaggaagatctggtcctgtgggaggtcctggttctgctgga cttaaaggtgacagcggcgactccgggccacagggaccaagaggtcttcagggttcaagt ggtcccccagggaaagcaggaaagaggggtcgtaatggagccgatggtgctcgaggaatg ccaggagagggcgggtccaagggtgacagaggttttgacggccttcctggtcttccagga gaaaaagggcatagaggagaatacggttcctcaggtcctccaggatctccaggagaggat ggcccaagaggtgaagatggccaggttggacagagaggtgtggctggagagagtggtcct cgaggtttgcttggccccagagggtctcagggtcctggaggacagcgaggtcttcctgga cttgatgggcaagctggtcccaaaggaaacctgggtccacaaggagagccggggccttcg gggcaacagggaatgactggtccacatggtcttattggacctcaaggcccgatcgggcca cctggtgaaaagggacctcaaggaaaacaaggtctggccggccttactggtgctgatggc cctcctggtcacccaggaaaagaaggtcctgcaggcgagaaaggaacagttggttttcct ggtccaatggggtccatcggctaccctggtcctcgcggtgtgaaaggtgctgagggaatc agaggccttaaaggtggcaaaggagaaaagggagaggatggattccctggcttcaaaggt gacatgggtctcaagggtgacaagggtgagaatggtgttttcggacccagaggagaggac ggccccgagggccccaaaggcaaatcaggacccaacggggaaattggtcctttgggatca gctggagagaagggaaaacttggagtccccggattgcctgggtaccctggtcgacaaggc tccaagggctccaacggcttcaatggattccccggggcaaatggcgagaagggagcaagg ggacttgccggcaaagcaggccctagagggcaacgtggtccaacgggtccacgtggtggc cgtggcgctagaggaccaacaggaaagccaggcgcaaagggaacctccggcaatgatgga ccagggggtccaccaggagagaggggacctcaagggcctcagggacccgtcggtttcccc ggacctaagggacccaatggtccaccaggaaaagatgggctgcccggtcatcctggacag agaggagagacgggcttccaaggaaagactggacctccaggacctggaggggtggttgga ccacagggcccaacgggagagacgggacccagcggagagcgaggacacccaggctctccg gggccacctggtgagcaaggtcttcctggagctgctgggaaagagggtggaaagggtgat ccaggttcccagggtcccggtggcaaggcaggacctgctggcttgaggggcttccaaggc actagaggtcttccaggggccatgggtccagctggcttaaagggaggagaagggcctcag ggtccccccggcccattcggttctcctggagagagaggcgctgctggccccggaggtccc attggtctgacgggtcgcaacggcccccaaggaccacctggccctgctggagaaaaagga ggccctggggagaaaggtcccgtgggtcctgctggccgcgatggcattcaaggtcctgtt ggccttcctggtcccgccggtcctcagggtccccccggagaggacggtgacaagggagaa gttggtggacctggacagaagggaagcaaaggagacagcggtgaacttggtccaccaggc ccaagcggtcttcagggtgtggtcggagctcctggtccagctggcactgatggtgagtcc ggtccgagaggacagcagggtatgtttggccagaaaggagacgagggagccagaggattc cccggtctaccaggaccccttggtctgcagggattgcccggccctcctggtgagaagggg gagaatggagacgttggagcaatgggcccacctggtcctcctggccccagaggtcctcag ggttcaagcggagccagcggtcctcaaggtccttctggtggtattggtgcaatgggtggt gttggtgagaagggagaaaacggtgaagctggcaacccaggaccatctggagaacctggt atcggaggatccagaggagagactggagagaagggagaaactggcccacctggagctgct ggacccgccggcgcccgcggaccccctggagatgacggtcccaagggaaaccctggtcct gttggcttcccaggagaccatggcccccctggagagcctggtgctgctggtcttgacggt ttatcgggtgacaaaggagacgatggagacgctgggcaacctggccctccaggtccatct ggtgaggctggagtaccaggacctccaggcaaaaggggtcctcttggatcagcaggtcca gaaggcagacaaggagaaaagggatcaaagggagaaactggtgccgaggggactgttggg aaaaccggacctgtgggacctcaagggcctgctggaaaggctggtcctgaaggactgcgt ggaattcctggtcctgttggtgaacaaggactgcctggtgcttctggtcaagacggccct cctggacctttgggccccactggacttcctggtatgaaaggtgactctggagggaaggga gagaagggtcatccgggtcttatcggtctgattggaccgcctggtgagtctggagagaag ggagaccgaggattgcctggacttcagggtactgccggtggcaagggtgatgctggtatt gtgggttcctacggtcctctcggccctcctggtcctcctggtatttctggccctcaagga cagaaaggctcaaagggatcagatggttcaaccggtcagaagggagacactggactgatt ggaccacctggacaacctggtccacccggtgatgtcatccagccgctgcccatccagcag tccagaaagaccaggcggcacgccgagatgcagggagacgaggcgatggcagactacagc gtagatggcgtcggtatggagggaatggaggatgtcttcggatccctcaacaacctcaaa caggacattgagcgcatgaagttccccatgggcacccaagacaatcctgccaggacctgc aacgacctgcacctcagccagccggactatgcagatggtgaatactggattgatccaaac cagggctgcatcggagactccattaaagtgttctgcaacttcacagcaggcggagaaacg tgcatacacccagataagaaatccacaggagttagaatatccaactggcccaaagagtct ccaggttcatggttcagtgaattcaaacgtggcaaaattttgagctatgttgacatggca gaaaacaccatcaacacagtgcagatgaccttcctgaagctgctgagctcctcggcacga cagaacttcacctacatctgtcatcagtctgcggcctggtacgacgccaaggcggacaac tatgacaaggcagtgcgcttcctgggctccaacgatgaggagatgtcctacgacaataat cccttcatcaggcctctgatggacggctgctcgctgaagcagggctattcaaagacggtg atggagatcaacactccccgcatcgaccagttgccaattattgacgtcatgctgaatgac tttggggaatccaaccagaggtttggctttgaggtcggccctgtctgtttcctaggctag

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