Clinocottus analis (woolly sculpin): 137782246
Help
Entry
137782246 CDS
T10471
Symbol
tnn
Name
(RefSeq) tenascin-N
KO
K06252
tenascin
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04510
Focal adhesion
cana04512
ECM-receptor interaction
cana04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137782246 (tnn)
04518 Integrin signaling
137782246 (tnn)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137782246 (tnn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cana00536
]
137782246 (tnn)
Glycosaminoglycan binding proteins [BR:
cana00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137782246 (tnn)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fibrinogen_C
fn3
EGF_Teneurin
EGF_TEN
Fn3_Dep-1_3rd
EGF_2
FN3_DSCAM-DSCAML_C
Fn3_PBP1
EGF_Tenascin
Pur_ac_phosph_N
Fn3_VIN3
Interfer-bind
DUF7949
NDNF
Fn3_SaeA_3rd
Ig_ILCR1
Motif
Other DBs
NCBI-GeneID:
137782246
NCBI-ProteinID:
XP_068427554
LinkDB
All DBs
Position
Unknown
AA seq
868 aa
AA seq
DB search
MTRRRLCSALGLLVLLCMAAPLSSASGPASGPASGPAPPAPQGLTFSHVYKIDIPGSSSC
KLELLPTQDETGLQTQSSSNGENDVVFSHNIRLQAPACDCEASEGFKALMHRVNGLEEDV
SYLKTQCTLGCCGRGGAAVDTSCSDHGSFQPDTCSCLCSAGWDGPACSLPSCPAGCSHHG
RCEEGKCVCRQGFTGEDCSQPVCPDDCNDKGRCVEGKCVCFPLFSGEDCRVQKCPGGCVG
NGRCESGRCVCEDGFYGDDCSSVSGPQGLRVLQLTDVSLLVTWESVVGADYYILTYHPTN
EPSAQEQVRVSNTDHSFLITGLSPGVTHLVQVYAVVKGTQSEADKMEATTDVSAIDGIKV
LGQTEVSIQVDWKNPPAQVDHFRLTHTDPTGRQEQQEVQRNQEARTTHTIDGLHPGTEYQ
ISVQAVKGLTEGEASSVTAATDIDAPASLVTTAVTEDTASVSWDLVRADIDGYMLSYTSA
EGSSADIPVGRDRTSYRLLGLKPGAVHTVDIWTFKGSRVSRKSSTTAETDIDAPTELKAT
DVTLDSALLTWVPPLADIEGYVLTCREEEGNMETVEQQLDALQSRFSVSSLETGRSYVVS
IAAYRGDKRSAVVETIFRTVGLLYPFPMDCLHIMKNGNKKSGVYTVYINSNRSKPVEAFC
DMETDGGGWLVLQRRTSGKLDFMKRWRQYIAGFGNMTDEFWIGMDKIYELTNTPTAYELR
FDLGLGAERAFALYDNFKIAPVKQKFKITIGKYSGTAGDAMTYHQGRPWTTIDNDNDIAL
GNCALVHRGAWWYKNCHLANINGKWGDSRHSLGVNWEPWKGHLVSLDFTEMKIRPVGASS
GRKRRSVATREERTTWNLQTKQQKHSES
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgaccaggagacgtctgtgcagcgctctgggcctcctggtcctgctctgcatggcggcg
ccgctcagctccgcctccggccccgcctccggccccgcctccggccccgccccaccggcc
cctcagggactcaccttcagccacgtctataagatcgacatcccgggaagctccagctgt
aaactggagcttctgccaacgcaggacgagacaggtctgcagacgcagagcagctcgaac
ggagagaacgacgtcgtcttcagtcacaacatccggctgcaggcgccggcgtgcgactgt
gaggcgtctgaaggcttcaaggctctgatgcaccgcgtcaacgggctggaggaggacgtc
agctacctgaagacgcagtgcactctgggatgctgcgggcgcggcggggccgcagtggac
acgagctgcagcgatcacgggagcttccagcccgacacctgcagctgcctctgcagcgcg
ggatgggacggcccggcctgctcgctgccctcctgccccgccggctgcagccaccacggc
cggtgtgaggaggggaagtgtgtgtgccggcagggcttcacgggggaggactgcagccag
cccgtgtgtcccgacgactgcaacgacaagggccggtgcgtggaggggaagtgtgtgtgt
ttcccgctcttcagcggcgaggactgcagagtccagaagtgtcccggcggctgcgtcggt
aacggccggtgcgagagcggccggtgcgtctgtgaagacggcttctatggagacgactgc
tcatcagtgtccggtcctcagggtctgcgcgtgctgcagctgacggacgtctccctcctg
gtcacgtgggaatcagttgttggagcagattattacatcctgacgtaccatcccacgaac
gagccgagcgcccaggagcaggtccgggtgtccaacacagatcattccttcctcatcaca
ggactcagtcctggagtcactcacctggtccaggtgtacgccgtcgtcaaaggaacccaa
agtgaagcagacaagatggaagcgaccacagacgtctccgctatcgatgggatcaaagtc
ctcggccagactgaagtctccatccaggtggactggaagaacccgccagcgcaggtggat
cacttcaggctcacgcacaccgacccgaccgggcggcaggagcagcaggaggtgcagagg
aaccaggaggcgcgcaccacacacaccatcgatggtcttcatccaggaacagagtaccag
atctcagtgcaggccgtcaaaggactcactgagggagaagcgtcctctgtgactgctgct
acagacatcgatgctcctgccagcctggtcaccacggcagtgacggaggacacggcatcg
gtttcatgggatctggtccgggccgacatcgacggctacatgttgagctacacctcggcc
gagggctccagcgccgacatccccgtgggacgcgaccgcacctcgtaccggctgctgggc
ctgaagcccggcgccgtgcacacggtggacatctggaccttcaaggggagccgagtcagc
aggaagagctcgaccacagcggagacagacatcgacgccccgacggagctgaaggcgacc
gatgtgactctggactctgcgttgctgacctgggttcctccgctggccgacatcgagggt
tacgtcctcacctgcagagaagaggagggcaacatggagacggttgaacagcagctggat
gcccttcagagccgcttctctgtgtccagtctggagacagggaggagctacgtagtctcc
atcgctgcctacaggggagacaagaggagcgcggtggtggagaccatcttcagaacagtt
ggcctcctgtaccccttccccatggactgccttcacatcatgaagaacggcaacaagaag
agcggcgtctacaccgtctacatcaacagcaaccgctccaaaccagtcgaggctttctgt
gacatggagacggatggaggcggctggctggtgctccaacgacggacctctggcaagctg
gacttcatgaagcgctggagacagtacatcgcagggtttggcaacatgacagacgagttc
tggatcggtatggataagatatacgagctcaccaacactcccactgcgtatgagctgagg
ttcgacctgggcctgggcgccgagagagccttcgccctgtacgacaacttcaagatcgca
ccggtcaagcagaaattcaaaatcacgatcggcaaatacagcggaacagcaggtgatgct
atgacgtaccaccaaggccggccctggaccaccatcgataacgataacgacatcgctctg
gggaactgtgccctggtccaccgaggagcctggtggtacaagaactgtcacctggccaac
atcaatggaaagtggggcgacagccggcacagtttgggcgtgaactgggagccgtggaaa
ggccacctggtgtccctggacttcaccgagatgaagatccggcctgtgggagcctcgtcc
ggcaggaagaggcggtcggtggcgaccagagaggagagaacaacctggaacctgcagacg
aagcaacagaaacacagcgagagctga
DBGET
integrated database retrieval system
