Clinocottus analis (woolly sculpin): 137782251
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Entry
137782251 CDS
T10471
Symbol
neo1a
Name
(RefSeq) neogenin 1a isoform X1
KO
K06766
neogenin
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04350
TGF-beta signaling pathway
cana04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
137782251 (neo1a)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
137782251 (neo1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cana04515
]
137782251 (neo1a)
Cell adhesion molecules [BR:
cana04515
]
Immunoglobulin superfamily
DCC/UNC5 family
137782251 (neo1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
Pur_ac_phosph_N
ig
Ig_DSCAM-DSCAML_C
V-set
Interfer-bind
NDNF
fn3_2
SusE
Sp38
EphA2_TM
DUF4834
CEMIP_X
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
137782251
NCBI-ProteinID:
XP_068427565
LinkDB
All DBs
Position
Unknown
AA seq
1509 aa
AA seq
DB search
MAERGALPLLSLLCLTFLSTETAAAKHVDKGSAAQPFNPFWFTAEPQDTLAVRGNSALLN
CSAHSDAAAAPARIEWKKDGTFMSLVSDERRSVLPDGSLFFAHVVHSKHNKPDEGTYQCV
ATIDNVGSISSRTARLSVAGMPRFTSQPSPAAVQLGNNQVMACEVNSDLVPFTRWEKDRL
PLEPSARLLQLPSGALVITNATEADAGLYRCLVENVGSSKASDEAQLQVLPETGEDRKPE
FLVQPASVTKALGAGVLLPCLVSGFPVPHVRWMFGDKLLEESEGRVELLGGGSVQISNLT
EEDAGIYTCMADTANATVEAQAQLSIQVPPQFVKRPDNVYAYESMDIVFECEVSGSPAPT
VKWVKNGDAVIPSDYFKIIKEHNLQVLGLVKSDEGFYQCLAENGAGNIQSSAQLIILEHG
VAPPSFLPPSLTPNTTDHVTPGSGGVAGPAGPTPSGPRDVVASLVSTRFIKLTWRPPAEP
HGDDLTYSVFYSQEGTSRERVVNTSRPGEMQVTIQNLMPDTKYRFRVVAHNSNGQGESSA
ALKVATQAEVQVPGPAPNLQAVSNAPTSVSLSWDKPLTGNGEMLTYKLYYTDKSFGDEQD
VDIDIQSYTMTGLKKNTEYSFRVVANNKHGPGVSTDDITVRTLSDVPSAPPQNLTLEVQN
SKGIMLRWQPPPLNGQNGEVTGYKIRYRKGSRRSEAAETTGGTQLFKLIDGLERGTEYSF
RVSAMTVNGTGPATEWTSTETFESDLDESRVPDQPSSLHVRPLVNSIVVSWTPPENQDIV
VRGYTIGYGIGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAYNNVGEGIPVYESAIT
RPQSDSIDPDVDLYELFHAPYTPVPDPSPMMPPVGVQASVLSHDTIKVTWADNSLPKNQK
ITDNRFYTVRWKTNIPANTKVKMANTTSLNHMVVGLKPNTLYEFSVMVTKGRRTSTWSMT
AQGTTFETIPSSSPKDVTVVSKENKPRTIIVNWQPPSEANGKITGYIIYYSTDVNAEVHD
WVIEPVVGNRLTHQIQDLTLDTTYYFKIQARNSKGMGPMSEAVHFRTPKTESSDKMANDQ
ASNLPPKQGPPGNQHPQDPRTAVGMGGNSEGHILVIVIIISVGAFTIIVVVVGAFLCTRR
TTSHQKKKRAASKSSNGSHKYKGNSKDLKPPDLWIHHERLELKPMDKSPDPNPVMTETPI
PRTSQDITPADSVLDSNPHLQQRRNSYRGHESEDSMSTLAGRRGMRPKMMMPFDAQPPQP
VISAHPIHSLDNHHHHYHMGSLASPTRSYLYHQGGGHPRPHVCATPISHLDRVDSTESVR
NTPSSEPLPPAAAASSQASCPSEIMADPEGSYHGSTTTEEEPSYSSNLPPHRSAHPHAHA
HPLKSFGVPSIPTAGHPTFESPALPSTPLLAQTGPPTHPHVVKTASIGTLGRTRNPMVVT
VPNAPDVPETSKMLEDVDSVLASLPPCPSPAPRSNPVPLPQSYEPDELTEEMAHLEGLMK
DLNAITTAP
NT seq
4530 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcggggagctctgccgctcctctctctcctctgtctcacctttctctccacg
gagaccgcggcggcgaagcatgtcgacaaaggttcagcagcgcagcccttcaaccccttc
tggttcacggcggagcctcaggacacgctggcggtccggggcaactcggcgctgctcaac
tgctcggcccacagcgacgcggcggccgcgccggcgcgcatcgagtggaagaaagacggc
accttcatgagcctggtctcggacgagaggcggagcgtccttcccgacggctcgctgttc
ttcgcccacgtggtccactccaagcacaacaagcccgacgagggcacctatcagtgcgtc
gccaccatcgacaacgtggggtccatctccagccggacggcccgcctctccgtcgcaggg
atgccgaggttcaccagccagccgtcgccggccgccgtgcagctcgggaacaaccaggtg
atggcttgcgaggtcaactcggacctggtgcccttcacccggtgggagaaggaccgcctg
ccgctggagccgagcgcccggctgctccagctgcccagcggcgccctggtgatcaccaac
gccaccgaggccgacgccggcctctaccgctgcctggtggaaaacgtgggctcgtccaag
gccagcgacgaggcccagctccaagtactgccagaaaccggagaggacaggaagccggag
ttcctggtgcagcccgcgtcggtgaccaaggcgctgggcgccggcgtgctgctgccctgc
ctggtcagcggtttccccgtgccgcacgtccgctggatgttcggagacaagctgctggaa
gaaagcgagggccgcgtggagctgctgggtggaggcagcgtccagatctccaatctcacg
gaggaggacgccggcatctacacctgcatggcggacaccgccaacgccaccgtcgaggcc
caggcacagctctccatacaagtccctccccagtttgtgaagcggccggacaacgtttac
gcctacgagtccatggacatcgtctttgagtgcgaggtgtcggggtcgccggcgcccacc
gtcaaatgggtcaagaacggagacgccgtcatccccagcgactacttcaaaataatcaag
gagcacaacctgcaggttctgggtctggtcaagtcggacgagggtttctatcagtgcctc
gcggagaacggcgcaggcaacatccagtccagcgcccagctcatcatcttagaacacggt
gtagccccgccctctttcctccccccctcactgactcctaacactactgaccatgtaacg
ccaggctccggaggcgtggccggtccggcggggcccaccccctccggcccccgggacgtc
gtggcgtccctggtctccacccgtttcatcaagctgacctggcgcccgccagccgaaccc
cacggagacgacttgacctactccgtgttctacagccaggagggaacgagcagggagcga
gtagtgaataccagccgtccaggggagatgcaggtcaccatccagaacctcatgccagac
accaaatatcgcttcagggtcgtggcccacaacagcaacggccagggagagagctctgcg
gcgctcaaagtggccacccaggctgaagtgcaagtgcctggcccggcccccaacctgcag
gcggtgtccaacgcgccgacctccgtctccctgagctgggacaaacccctcacgggcaac
ggcgagatgctcacctacaagttgtactacaccgacaaaagctttggcgacgagcaggac
gttgacatcgacattcagtcctacaccatgacggggctgaagaagaacaccgagtacagt
ttccgcgtggtggccaacaacaagcacggcccgggcgtctccaccgatgacatcacggtc
cgcacgctgtccgacgtaccaagtgctcctcctcaaaacctcaccctggaggtccagaac
tcaaagggcatcatgctccggtggcagcccccgccccttaacggacagaacggggaggtc
accggctacaagatccgataccggaaaggatcccggaggagcgaagcagccgagaccacc
gggggcacccagcttttcaagctcatcgacggtctggagcgcgggacggagtactccttc
cgggtgtcggccatgacggtgaacggcacaggaccggccaccgagtggacctcgacggag
acgttcgagagcgacctggatgaatcgcgcgtaccggaccagcccagctcccttcacgtc
cggccgctggtcaacagcatcgtggtgagctggacgccgccggagaaccaggacatcgtg
gtgcgcgggtacaccatcggctacggcatcggcagtccgcacgctcagaccatcaaagtg
gactacaagcagcgctactacaccatcgagaacctcgaccccagctcccactatgtgatc
accctgaaggcctacaataacgtgggcgagggcattcccgtgtacgagagcgccatcacc
aggccacagtcggactccatagaccccgatgttgacctgtacgaactcttccatgctcca
tacaccccagtaccagacccctccccaatgatgccacccgtgggcgttcaggcctccgtg
ctgagccacgacaccatcaaggtgacctgggcggacaactcgctgcccaagaaccagaag
atcacggataaccggttctacacggtccgctggaagaccaacatccccgccaacaccaaa
gtgaagatggccaacaccaccagcctgaaccacatggtggtgggtctgaagcccaacacg
ctctacgagttctccgtcatggtgaccaaagggcgccgcaccagcacgtggagcatgacc
gcacagggcaccacctttgagaccattcccagctcctccccgaaagacgtgaccgtggtg
agcaaagagaacaaacctcgcaccataatagtcaactggcagcctccctcggaggccaac
gggaagatcaccggctatatcatctactacagtacggacgtgaacgccgaggtccacgac
tgggtcattgaacccgtggtgggcaaccggctgacccaccagatccaggatctgacgctg
gacaccacctactacttcaagatccaggcccgaaactccaagggcatgggccccatgtcg
gaggccgttcacttccgcaccccgaagactgagtcctctgacaaaatggctaatgaccaa
gcttcaaatcttccaccgaagcaggggcctccgggcaaccagcatccacaggacccgaga
actgcagtcggcatgggaggcaacagcgaaggtcacatcctggtcatcgtcatcatcatc
tcggtgggagccttcaccatcatcgtggtggtggtcggggccttcctgtgcacgcggcgc
accacgtcgcaccagaaaaagaagcgagcggcctccaagtcctccaacggctcccacaaa
tacaagggcaactccaaagacctgaagccgcccgacctctggattcaccacgagaggctg
gagctgaagcccatggacaagtcgccggatcccaacccggtcatgacggagacgcccatc
ccccgcacctcgcaggacatcacgccggccgatagcgtcctggacagcaacccccacctg
cagcagcgccgcaactcctaccgcggccacgagtcagaggacagcatgtcgacactagca
ggccgacgagggatgaggcctaaaatgatgatgccttttgacgctcagcctcctcagccc
gtgattagcgctcaccccatccattccctcgataaccatcaccaccattatcacatgggc
agcctggcgtcgccgacgcgcagctacctctaccaccagggcggcgggcacccccgcccg
cacgtctgcgccacccccatctcccatctagacagggtggactccacagagtcggtgagg
aacacccccagttcggagcccctccctccggccgccgccgcctcctcccaggcctcctgc
ccgtcggagatcatggccgaccccgagggcagctaccacggctccaccaccaccgaggag
gagcccagctactccagcaacctgcccccccaccgctcggcccacccgcacgcccacgcg
cacccgctcaagagcttcggcgtgccctccatcccgaccgccggccacccgacgttcgag
tcgccggccctgcccagcacgcccctgctcgctcagaccgggcctcccactcacccccat
gttgttaaaacagcctctatcggaacactaggaaggactcgaaacccgatggtggtcacg
gtgcccaacgcccccgacgtgccagagaccagcaagatgctggaagacgtggacagcgtg
cttgcctccctccccccctgcccctcccccgcccctcgcagtaaccctgttcctctccct
cagagctacgagcccgacgagctgaccgaggagatggcccacctcgagggcctcatgaag
gacctgaacgccatcaccacagcgccatga
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integrated database retrieval system
