Clinocottus analis (woolly sculpin): 137782287
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Entry
137782287 CDS
T10471
Symbol
cop1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04115
p53 signaling pathway
cana04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
137782287 (cop1)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
137782287 (cop1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cana04121
]
137782287 (cop1)
Enzymes [BR:
cana01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137782287 (cop1)
Ubiquitin system [BR:
cana04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
137782287 (cop1)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
137782287 (cop1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_EIPR1
Beta-prop_RIG_2nd
zf-C3HC4_2
EIF3I
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
zf-C3HC4
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
zf-RING_2
Beta-prop_EML
zf-RING_UBOX
zf-C3HC4_4
Beta-prop_WDR90_POC16_2nd
zf-C3HC4_3
zf-RING_5
RING_XB3-XBAT31
WD40_RFWD3
Beta-prop_WDR35_TULP_N
WD40_like
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_NUP159_NUP214
Beta-prop_IFT122_1st
zf-rbx1
zf-RING_10
WDR90_beta-prop_4th
UvrD-helicase
zf_C2H2_10
Sina_RING
Motif
Other DBs
NCBI-GeneID:
137782287
NCBI-ProteinID:
XP_068427609
LinkDB
All DBs
Position
Unknown
AA seq
707 aa
AA seq
DB search
MSGSSVPSTSNVSGAGGTGNTNGGGNAVTSNGNNSGNVVPSRTLAGAGEGSLSVPTLAAV
PSSRSGFASLSRPTASSSSRKKSLHQAPLYNGLLNSYEDKSNDFVCPICFEMIEEAHMTK
CGHSFCFKCIRQSLEDSNRCPKCNYIVDNVDQLYPNFLVNELILKQKQRSEEKRLKLDHP
NGSRWQVFQDVLSPDQENLDLANVNLMLELLVQKKKQLEAESQAAQRQILMEFLKEARRN
KREQLEQLQKELSFLEEDIKRVEEMSGLYCPMMEAECTVPNVEAPSPAPSCSSIMEPPDY
SQPPGFGGTTQGKRQTWYNSTLASRRKRLTAHFEDLEQCYFSNKMSRITDEGRNLNQLDD
FMECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVFEYG
TVIQDAVDIHYPVNEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQE
HEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCVKFSPTSRYHL
AFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVNGEEIVSASTDSQLKLWNVNKPH
CLRSFKGHINEKNFVGLASNGDYVACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDK
KEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIKVCVLKVAHETHQ
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcagttcagtgcccagcacgagtaacgttagcggcgcaggaggcacagggaat
acaaacggtggcggcaacgccgtcaccagcaatgggaacaactctggaaacgtcgtgccc
tcccggaccctggcgggagccggtgaggggagcttgtcggtgccgacgttggccgcagtg
ccgtcgtcccggagcggcttcgcgtctttgagcagacccactgcgtcctccagcagcagg
aagaagtccctccaccaagcacccctctacaacggcctcttgaattcatacgaagataaa
agcaacgatttcgtctgtcccatttgcttcgaaatgatagaagaggcacacatgacgaag
tgcggccacagtttttgtttcaagtgcattcgccagagtctggaagatagcaacagatgt
cccaagtgcaactacattgttgataatgtggatcagctctacccgaacttcctcgtaaat
gaactgatccttaaacagaagcaacggtcagaagagaagaggctaaaattggatcatcct
aacgggtcgaggtggcaggtgttccaagacgtgttgagtcccgaccaggagaacttggac
ctggctaatgtcaatctgatgctggagctcctggtccagaagaaaaagcagctggaggcg
gaatcccaagcagctcagagacagatccttatggagttcctgaaagaagccaggagaaac
aagagagagcaactggagcaactgcagaaagagctcagctttcttgaagaggacattaag
cgtgttgaggagatgagcggactgtactgtccgatgatggaggccgagtgtacggtgcct
aatgttgaggccccctcaccagcacccagctgcagcagtattatggagccaccagactac
agccagcctccaggatttggtggaacaacccagggcaaaagacagacctggtacaacagc
acactggcgtcgaggaggaagaggctgacggctcactttgaggatctggagcagtgctac
ttctccaacaaaatgtctcgcatcacagatgagggcaggaacctaaaccagttggatgat
ttcatggagtgtctgtctaagttcacccgctacaactctgtacggccgctcgccaccctc
tcgtacgccagcgatctctacaacggctccagtatcgtctccagtattgagtttgaccgt
gactgtgactactttgccatcgctggtgtgaccaagaagatcaaggtgtttgagtatggc
acagtgatccaggacgcggtggacatccactaccctgtcaatgaaatgacctgcaattcc
aaaatcagctgtatcagctggagcagctatcacaagaaccttctggccagcagcgactac
gaaggtaccgtcatcctttgggatgggttcaccggccagaggtccaaagtctaccaggaa
catgaaaaacggtgttggagtgtcgacttcaacctaatggaccccaagctgttagcctcc
ggttctgatgatgcaaaagtgaagctatggtcaaccaaccttgataactctgtagccagc
atcgaggccaaggccaacgtctgctgtgtgaaattcagcccaacctccaggtatcacctg
gcctttggctgtgcagaccactgtgtccactactatgatctacgcaacaccaagcagccc
atcatggtattcaaaggccacaggaaggcggtgtcctacgccaagtttgtcaacggagag
gaaatagtttctgcatccacggacagccagctgaagttgtggaacgtcaacaaacctcac
tgcctgcgctccttcaagggtcacatcaatgaaaagaactttgtgggcctggcttccaat
ggagactatgttgcctgtggcagtgaaaacaactccctgtacctgtactacaaagggctg
tcaaagacactgttgacattcaagtttgacacagtgaagagcgtcctggacaaagacaag
aaggaagatgacaccaacgagtttgtcagcgccgtctgctggagagccctgcccgatgga
gagtcaaatgtcctgattgctgcaaacagtcaaggaacgattaaggtttgtgttttgaaa
gtcgctcatgaaacacaccaataa
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