Clinocottus analis (woolly sculpin): 137782370
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Entry
137782370 CDS
T10471
Symbol
col6a2
Name
(RefSeq) collagen alpha-2(VI) chain
KO
K06238
collagen type VI alpha
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04510
Focal adhesion
cana04512
ECM-receptor interaction
cana04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137782370 (col6a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137782370 (col6a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
137782370 (col6a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cana04147
]
137782370 (col6a2)
00536 Glycosaminoglycan binding proteins [BR:
cana00536
]
137782370 (col6a2)
Exosome [BR:
cana04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
137782370 (col6a2)
Glycosaminoglycan binding proteins [BR:
cana00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137782370 (col6a2)
Hyaluronan
Extracellular matrix or blood plasma proteins
137782370 (col6a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Motif
Other DBs
NCBI-GeneID:
137782370
NCBI-ProteinID:
XP_068427737
LinkDB
All DBs
Position
Unknown
AA seq
1010 aa
AA seq
DB search
MLGLEVIALCLLFGALAHGQECSKKNDCAMEVYFTIDTSETIALQEPPPGALVESIKKFV
EQFAQRLDDAELNGVVRVNWKIGGLHFSQEYKEFSPLASKNDFITGVRRINYLGKGTYID
CAISNMTQHMLRSPTSPRTLRFAVVITDGHVTGEPCRGIKVAAERAREEGIRIFVVAASK
NVDETGLREIANSPVSLYRRDFMAVDLSSGKAVIDTETIDSIIKTMKHHAIVDCYKVSCL
ETKGSDGPKGPRGQKGAKGDNGDPGLKGLPGRPGDPGIEGPIGQPGSKGEPGQTGEKGEL
GTQGKKGVFGIPGRNGTDGQKGKIGRIGAPGCKGDPGDRGPDGHPGDVGDRGFGGSEGDK
GDAGRPGKSGPSGPSGEAGPKGESGSPGSPGIPGLKGNPGSPGNTGSRGEPGRRGDYGPK
GAQGTDGNKGDKGEMGPEGLRGLPGESGNKGTKGDNGLPGPRGPPGTSGEAGKNGTRGDI
GDAGSRGEPGPIGPKGDLGRPGFSYPGSRGPSGDRGDNGNRGPRGGRGDCGQKGDPGNKG
ILGEGGEPGSTGEPGLRGPRGEGGRDGYPGPEGDPGLTECDVMTYIRETCGCCDCEKRCG
PLDIVFVIDSSESVGLTNFTLEKNFVINTINRLGSLAKDPKSETGTRVGVVQYSHSGTFQ
AIRLDDPKIDSLSAFKNAVKRLEWIAGGTWTPSALKYAYDNLIKDSRRAKAKVTVVVITD
GRFDPRDDDMLLTSLCSHPGVDVSAIGIGDMFDQIEENESLKSIACQKDGRVMGMKRFVD
LVAEEFLDRIENVLCPDPIIVCPDLPCKSEPSVASCVQRPVDVVFLLDGSERMGLEDHRK
AKEFIENVARRLTLASGQSDERNARMALLQYGSTTEQRVEFALTHNLTVISDSLAGVTYM
DSSSALGSAIIYAVNNLVIPQRGERLARRNAELAFVFVTDGVTASEQLDEGVSAMRRAEG
VPTVIAVGSDTDEEVLRKVSLGDMSAVFRGADYAALNKPSFFDRFIRWIC
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgctggggttagaggtcatcgcgctctgtcttctttttggagccctggctcacggccag
gagtgcagcaagaaaaatgattgcgccatggaagtgtacttcaccatagacacatctgag
actatcgccctgcaggagccgccccccggagcgctggtggaaagcatcaagaaattcgtt
gagcagtttgcacagcgtttggatgatgctgaactcaatggtgttgtgcgggtcaactgg
aagatcggtggactgcacttctctcaggagtataaagagttcagtcccctcgcatccaag
aatgatttcatcactggcgttaggcgaatcaattacctgggtaagggcacctacatcgac
tgcgccatcagcaacatgacgcagcacatgctaaggtcacccacaagcccccgcaccctc
cgattcgctgtggtcatcaccgacggccacgtgaccggtgaaccgtgcaggggcatcaaa
gtggccgcagaaagagctcgcgaggagggcatccggatatttgtcgtagcggcatccaag
aacgtggacgagacggggctgagggagattgccaactctcccgtaagcctctacaggagg
gacttcatggctgtggatctgagctcagggaaagccgtcatagatacggagaccattgac
agcatcatcaagacaatgaaacatcatgcgatcgtagactgttacaaagtgtcctgtctg
gagacaaaagggagtgatggaccaaaaggccccagaggacaaaaaggagccaaaggagac
aacggcgaccccggtctgaagggattaccaggtcgcccaggagaccccggtatcgaaggt
cccatcggtcagcctggttccaagggagaaccaggtcagacaggcgagaagggggaattg
ggaactcaagggaaaaagggcgtgtttggcattccaggacgtaatgggacagatggacag
aagggtaaaattgggcggatcggtgctcccggttgcaaaggagacccaggcgacagaggt
cctgatggtcaccccggtgatgtcggtgatcgcggtttcggtggaagtgaaggagataag
ggggatgccggtcgccctggaaaaagtggaccctccggcccgtctggagaagctggacca
aagggagagagtggaagtcctggatcacctggcatccctggactgaaaggaaacccagga
agccctggaaatacgggatccagaggagagcctgggagaagaggagactatgggccaaag
ggtgctcaaggaacagatggcaataagggagacaagggtgaaatgggtccagagggcttg
agaggacttccaggtgaatcaggaaacaaaggaacaaagggagacaatggcctgccaggc
cccaggggaccaccggggacatcaggagaggctgggaaaaatggtaccagaggggacatt
ggtgatgctggatctcgaggagaacctggaccgattggaccaaagggagaccttggaaga
cctggcttcagctatcctgggtcaagaggaccatcgggtgatagaggagacaacggcaat
cgtggacctcgcggcggcagaggagactgtggtcaaaagggtgacccagggaataaagga
atcctgggagagggaggtgagccaggatcaacaggtgagccaggcctcagaggaccaaga
ggagagggtgggcgtgatggatatcctggccctgagggagatcccggcctcactgaatgt
gacgttatgacctacatcagagaaacatgtggctgctgtgactgtgagaaacgctgcgga
cccttggacattgtgttcgtgatcgacagctcagagtcagtgggtctgaccaacttcacc
ctggagaagaactttgtcatcaacaccatcaacagattgggatcccttgccaaagacccc
aagtcagagacaggcacaagagtgggagttgtccagtacagtcacagtggaaccttccag
gccatccgactcgacgaccccaagatcgattcactgtctgctttcaagaatgcagtgaag
cgcttggagtggatcgccggaggaacatggactccatccgctctcaagtatgcctacgac
aatctgattaaggacagccgcagggccaaagccaaagtcaccgttgttgtcatcacagat
ggacgcttcgaccccagagatgacgacatgctgctcacctccctctgcagtcatcccggc
gtcgatgtgagtgctattggtatcggagacatgttcgaccagattgaggagaatgagagc
ctgaagagcatcgcctgccagaaagatggcagggtgatgggcatgaagcgctttgtagac
ctggtggcagaggagttcctcgacaggattgaaaacgtgctctgcccagatcccatcatc
gtatgccccgatctaccttgtaaatcagagccttcagtggctagctgtgttcagcgtccc
gtggatgtggtgttcctgttggatggctctgagaggatgggactggaggaccaccgaaag
gccaaagagttcatcgagaacgtggctcgtcgcctcaccctggccagcggccagtcagac
gagaggaatgcccgcatggctctgctgcagtatggcagcacgacagaacagcgggtggag
ttcgcgctcacacacaacctcacagtgatctctgattcgctggcgggggtgacctacatg
gactcctcctctgctctgggcagcgccatcatctacgccgtcaacaatctggtgattcca
cagcgaggagagcgcttggctcgtcgcaacgccgagctggccttcgtgttcgtcactgac
ggcgtcacggccagcgagcagctggatgagggcgtgtcggccatgaggcgggccgaaggc
gtccccacggtgatcgccgtgggatccgacacggacgaggaggtgctgcggaaggtgtcg
ctcggtgacatgtcggccgtcttcagaggagccgactacgccgcgctgaacaagccgtcg
ttctttgatcgcttcatccgctggatatgctag
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