Clinocottus analis (woolly sculpin): 137782462
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Entry
137782462 CDS
T10471
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM50-like isoform X1
KO
K12024
tripartite motif-containing protein 50/73/74
Organism
cana Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cana04121
]
137782462
Ubiquitin system [BR:
cana04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
137782462
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_6
Apolipoprotein
Prefoldin
zf-Nse
Motif
Other DBs
NCBI-GeneID:
137782462
NCBI-ProteinID:
XP_068427844
LinkDB
All DBs
Position
Unknown
AA seq
487 aa
AA seq
DB search
MERRQSLEDQLRCPVCLDVFTEPLMLQCGHSYCRCCVRSMTMDLLGQLQCPVCRCAVDGD
SPPPNVSLARIIDALQEGSVSGAQESCPQHHNPLSLYCEDEQAVICGLCGSIGAHRGHKI
TPVSSVYSRMKEDISCLITEFQHQKRKLEDRICKMAYNKSRITNESDVLKWVVRKEFGEL
RRCLEVEEAGFMQQVETSTAVLISSLQNQTDQLNLNLNRLQEAQNTLQDLSNEGHLGFIM
KYGSIAPRFREIQELQKKEERIFSSLNFKTGFNHNDIKLTVWKRLQRKVLPAPERMRLDP
QTAHPMLELHHGDTVVSCGALLRRLPDNPERFSYSYCVLANRGFSSGKHYWEVEVANKPK
WRLGLIKGTTNRKAKLGKNPESGVWLIGLKDGVYEAFSSPRVALPLLSPPHRVGLFLDYD
GRGLTFYNSDNPDELSFIYSFRLEVQGKVYPLLDVCWHDRGHNKQTLVLPQPQKHTDRST
NSETQQA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggagcgtcgtcagagtctggaggatcagctcaggtgtcctgtttgtcttgacgtcttc
accgaaccactgatgttacagtgtggacactcctactgcaggtgttgtgtgcgctccatg
acaatggacctgctgggtcagctgcagtgtcctgtgtgtcgctgtgctgttgatggagac
agtcctcctcccaacgtcagcttggctcgaatcatcgatgctctgcaggaggggagtgtt
tcaggagctcaggagtcgtgtcctcagcaccacaacccgctcagcctttactgcgaggac
gagcaggcggtgatctgtggcctctgtgggagcatcggggctcaccggggacacaagatc
acacctgtgagctccgtctacagccgcatgaaggaggacatttcctgtctgataacagag
tttcagcatcagaaacgtaaactggaagatcggatctgtaaaatggcgtacaacaaatcc
aggatcactaacgagtctgacgtgctaaaatgggtggtgaggaaggagtttggtgaacta
cggcgctgcctggaggtagaggaggctggattcatgcagcaggtggagacctccactgct
gtcctcatctcgtcgcttcagaaccaaactgaccagttaaacctgaacctgaaccggctg
caggaagcccagaacaccctgcaggacctgagcaatgagggccacctaggcttcatcatg
aagtatggatcgattgctccaaggttcagagagattcaggaactccagaaaaaggaggag
aggatcttcagctctctgaactttaaaactggtttcaaccacaacgacattaaactaact
gtgtggaaaagactgcagagaaaagtcctaccagcaccagagcggatgaggctggatcct
cagactgctcacccaatgctggagctccatcatggggacacagtggtgagctgcggggct
ctgctacgcaggcttcctgataatccagagaggttcagttacagttactgtgtcctggcc
aaccgaggcttctcctctgggaaacactattgggaggtggaggttgctaacaaaccaaaa
tggcgtcttggtttgatcaaaggaacgaccaatcgtaaggccaagctggggaagaatcca
gagagtggagtgtggttgattggactgaaggatggagtttatgaagccttctcttctccc
agggtcgccctgccgttgctgtctccgccccaccgggtgggtctcttcctggactatgac
ggcagaggtctgaccttctataacagcgacaatcctgacgagctcagcttcatctatagc
ttcaggctggaggtccaggggaaagtctaccccttgttagatgtctgctggcatgaccga
ggacacaacaagcagaccctcgtcctccctcagccccagaaacacacagacaggtctacc
aactcagaaacacaacaagcttaa
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