Clinocottus analis (woolly sculpin): 137782474
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Entry
137782474 CDS
T10471
Name
(RefSeq) dynein, cytoplasmic 1, intermediate chain 2a isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04145
Phagosome
cana04814
Motor proteins
cana05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
137782474
09142 Cell motility
04814 Motor proteins
137782474
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
137782474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cana03036
]
137782474
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cana04812
]
137782474
Chromosome and associated proteins [BR:
cana03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
137782474
Cytoskeleton proteins [BR:
cana04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
137782474
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_EML
Dynein_IC2
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
Beta-prop_NUP159_NUP214
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_IP5PC_F
WD40_RFWD3
Beta-prop_DCAF4
Glyco_transf_5
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
137782474
NCBI-ProteinID:
XP_068427866
LinkDB
All DBs
Position
Unknown
AA seq
666 aa
AA seq
DB search
MGLSLQRRFSLGWRTGGIQLASGLGSQRIYFLAGIRCGIMSDKSELKAELERKKQRLAQI
REEKKRKEEERKKQATDQLKEAANHQNDSDLEKKRREADAILQSMGITSDAPVAPPPISP
TTKSAGTPSEAGSQDSDGAVGPRTLHWDSDPSTLQLHSDSELGRGTPKLGMAKVTQVDFP
PRETVSYTKETQTPVMTQPKEEEEEEEESAAPQPVVETQTEKADQKVEEEAIPYELTEEE
KLQILHSEEFVDFFDHSTRIIERALSEHVDLFFDYSGRDLEEKEGEIQAGTKLSLNRQFL
DERWSKHRVVTCLDWSTQYPELLLASYNNNDEAPHEPDGVALVWNMKYKKATPEYVFHCQ
SAVMSAAFAKFHPNVVVGGTYSGQIVLWDNRSNKRTPVQRTPLSAAAHTHPVYCVNVVGT
QNAHNLISISTDGKICSWSLDMLSQPQDSMELVFKQSKAVAVTSMSFPLGDVNNFVVGSE
DGSVYMSCRHGSKAGISEMFEGHHGPITGINCHTAAGPLDFSHLFVTSSFDWTVKLWSTK
NNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGVGHLDLWNLNNDTEVPTASATVEGNPA
LNRVRWAHSGKEIAVGDSDGRVLVYDVGEQTAVPRNDEWTRFVRTLAEINENRDDAEELA
AQRLAA
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgggtctgtcacttcagagaaggtttagcctgggatggaggacaggcggaattcaactg
gcatccggtcttggtagtcagcggatttattttcttgcagggattcgctgtggcatcatg
tcggacaaaagtgagctgaaagccgagcttgaaaggaagaaacaacgactggcacaaatc
agagaggagaagaaaaggaaggaggaggagcgcaagaagcaagccacggaccagttgaaa
gaggctgcaaatcaccaaaatgattctgacctggaaaaaaaaagacgtgaggctgatgct
attctacagagtatgggcataacctcagatgcccctgttgcccctcctcccatctctcca
actacaaaatcggcgggcacaccaagtgaggcagggagccaggattctgatggtgccgtg
ggacccaggactctgcactgggactctgacccgtccactcttcaacttcactctgattct
gagctggggcgtggaactccaaaactgggaatggccaaagtcacacaagtggactttcct
ccacgtgagactgtgtcctacacaaaagagacccagacacctgtcatgactcagccaaaa
gaagaggaagaagaagaggaagaaagtgctgcacctcaaccggtcgtggaaactcagact
gagaaagcggatcaaaaagtggaggaggaagcaatcccctacgagctgacagaggaggaa
aaactccagatccttcactctgaagagtttgtggatttcttcgaccatagcactcgcatc
attgagcgggctctatcggaacacgtggacctcttttttgactacagcggccgtgacctc
gaggagaaggagggtgaaatccaggctggaacaaagctctccctcaacaggcagttcttg
gatgagcgctggtccaagcatcgcgtcgtcacctgcctggactggtccacccagtatcct
gaactgctacttgcctcatataacaacaatgacgaagctcctcacgagccagatggcgtg
gccttagtgtggaacatgaagtacaagaaggccacaccagagtacgtcttccactgtcag
tctgccgttatgtcggccgcgtttgccaagttccaccccaatgtcgtggtggggggcaca
tactcggggcagattgtactgtgggacaacaggagcaacaagaggaccccggtgcagagg
actcccctgtcggcagcagctcacacgcaccctgtatactgcgtcaatgtggttggcacc
cagaacgcccacaacttgattagcatctccactgatggcaagatttgctcctggagtctg
gacatgctctcccagccacaggacagcatggagctggtgttcaagcagtccaaagctgta
gctgtcacctccatgtctttccctctcggagatgtcaacaatttcgtggtgggcagcgaa
gacggctccgtctacatgtcgtgtcgtcatggaagcaaagcgggcatcagtgagatgttt
gagggccaccatgggcccattacagggataaactgccacacagctgcagggcctctggac
ttctcccacctgtttgtcacctcttctttcgactggactgtcaagctgtggagcaccaag
aacaacaagcctctctactcatttgaagataactcggattacgtgtacgatgtcatgtgg
tctccgactcaccctgctctgtttgcttgtgtggacggagtgggtcatctggacctgtgg
aacctcaacaacgacactgaggttcctaccgccagcgctactgtagagggtaacccggct
ctcaaccgggtcagatgggctcattctggcaaagagatcgctgtgggagactctgatgga
cgagttcttgtgtatgatgttggagagcaaactgcggttccacgtaacgatgagtggacc
cgttttgttcgcacgctggcagagatcaacgagaacagagatgatgcagaggagctggca
gctcagcgcctggctgcctga
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integrated database retrieval system
