Clinocottus analis (woolly sculpin): 137782638
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Entry
137782638 CDS
T10471
Name
(RefSeq) fibronectin-like isoform X1
KO
K05717
fibronectin 1
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04510
Focal adhesion
cana04512
ECM-receptor interaction
cana04810
Regulation of actin cytoskeleton
cana04820
Cytoskeleton in muscle cells
cana05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137782638
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137782638
09142 Cell motility
04820 Cytoskeleton in muscle cells
137782638
04810 Regulation of actin cytoskeleton
137782638
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
137782638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cana04131
]
137782638
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cana04147
]
137782638
00536 Glycosaminoglycan binding proteins [BR:
cana00536
]
137782638
04990 Domain-containing proteins not elsewhere classified [BR:
cana04990
]
137782638
Membrane trafficking [BR:
cana04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
137782638
Exosome [BR:
cana04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
137782638
Glycosaminoglycan binding proteins [BR:
cana00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137782638
Domain-containing proteins not elsewhere classified [BR:
cana04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
137782638
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
fn1
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
fn2
Fn3_Dep-1_2nd
Fn3_Dep-1_4th
FN3_Tor_3rd
GH101_dom-5
Motif
Other DBs
NCBI-GeneID:
137782638
NCBI-ProteinID:
XP_068428198
LinkDB
All DBs
Position
Unknown
AA seq
2506 aa
AA seq
DB search
MSGSSIARVLVALCIGSAVNCMPKGTHKSRRQAQQQHQSSSVSQDGCIENGQLYGINDQW
ERPYLGSTLVCTCYGVAGIKCKSKPEAEEKCYDKINQQSYTVGETYERPKEGMIWDCTCI
GSGRGKISCTIGNRCHEGGASYKIGDTWKRPHETGGYMLECVCLGNGKGEWTCKPVAERC
YDNSEGTSFVVGETWEKPYQGWMVVDCTCLGEGSGRITCTSRNRCNDQDTLTSHRIGDTW
TKTDAQGHSLQCLCTGNGRGEWKCERHASLHTTGLGTGSRVITNIQPAVYHPATVPELTQ
EGPCRTDAGLSYFIGQRWMKNQGTKQLICTCLSNGVSCEQWDGPAPVYGGNSGGQPCVFP
FLYKGKTYHSCISEGRSDGQLWCSTSSDFETDQKYSFCTERNVIMATRGGNSNGALCQFP
YLYNGRNYTDCTADGRRDGMKWCGTTMDYDGEQRFGFCPMADNEEVCTTSEGVMYRMGEQ
WDKRHDILAHMMRCTCVGNGRGEWSCVAYSQLKDHCIVDGLNFEVNQTFTKQHEEGYTMN
CTCFGQGRGRWKCDAIDQCQEPETRAFYKIGESWDKVIQGVMYKCYCYGNGVGELSCEPQ
QSFPGGSRPVQVIITESGNQPNSHPIQWNAPQSAHITQYILKWKVKNTPTPWREVMIPGH
LNSHTISGLKPGITYEGQLISVLRFGRQEVTRFDFTTNYGSLATSQGETTPPPPVVDISE
SVTEITSSSFVISWVSASDTISGFRVEYELSEQGQGTGQPLVLDVPHTATSVNINELLPG
RKYTVNVYEVTEGGEDHLILTTTQTTAPDAPLEHEVEEVGETSMVISWEKPLAPITGYRI
VYTPSMEGESTELTLPDTATSVTLSDLRPGKLYNISIYAVEDSLESEPIFVQVNTAGEPL
PEEVSSPTDLQFFEVSDKKIVLTWTGPASAVSGYRVTSLPVDESGSPQREMTLPVSQNSY
IEVSDLLPGTLYRFSVYTIHNGEESLPLIGEQSTKPDAPTDIYFTNVTEDSAIMLWFAPR
AKISGYRLFLTIEGSNPKQLRLPARLSQYTLLNLKPDTEYSATLHAEQENTLSKGETAVF
TTNLPMGNAPHFSTDVTDTSIIISWTPVPHIEYKLTVRPSQGGEAPRDVTSDSGSIYVSG
LTPGVEYTYSVQPVINGHEQGTPITRRVVTPLSPPTDLNLESNPGTGDLTVQWNGASTPD
ITGYRVTCTPTNGQQGNSVEEFVEAGQNSCTLENLSPGVEYNISVVTVKDDMESTPISTT
ITPEVPKLTDLTFKDVSDTTISLSWSPLNTTAITGYRITVVAAGESVPIFEDMVLSTTGQ
YTVHGLEPGIDYDISVITVTENGESEPTTVTQKTSVPAPTDLGFAQVGPDSMQVTWVNPI
VPNTADINSFLIRYHPIDDDDDLTETSAGGRSNNVVLRNLLPNTEYLVSVVCVYEQRESS
PLVGTQTTALDSPVGLRFSEIFTNSFTIHWLAPQSKITGYRIRYQMVSGGRAKDERLPPS
RNHFTLTGLTADTEYLVNIYAVSRSKESLPLSGKQKTISDAPTDLEVLDSSPTSITVRWD
APPVTVRYYRITHGETGGHSNPKEFTVPGSQSTAKITNLKPGTDYTVTVYAVTGRGDSPA
SSTPIYVMHKTSVDSPSEMEVMEVNDNSVTVKWSPAQGPIKGYRVTGVPRNGQGQSFTEV
VAPDQTEITFSGLMPTVEYVLSVYALGQDGESSPVVVNALTNIDRPKDLTFSDIDSTSLR
ITWDSPEGIVTSYRVTYSSSEEGERELRPAPRGDAESTVIYGLQPGTEYTVTVIAVHDDT
ASTPLVGTQATAISAPTNLQFSQVSPTSFTMRWAVPGQENRLTGLTGLTGYRVVVNPKNK
SGPTKEINLAPDATQAHISGLMIATAYEVHVYALKNSLTSRPVKGEITTLENISPPRRVR
ISDVNDSSITLTWRSKTETISGFLVEATPTTSSAGYVPIQRTIGPDSRSFVITGLEPGTN
YKINIYTLKGNGRSAPLTLTATTAKPLVIPPTNIRFTSLNPNSISFTWEPSRSPRVTGYY
VTYEEAGGLPREIVPRPHAGQSYAIINGLKPGTEYVIKIVALQNSLRSTPLVGKARTQPA
PDRHLLVPELPQLPVPHRPTTDILDVPESFNDKIFDTNQVHLTGTSGQNQPGQQGQHIYT
EYQSLGPNNGLHGPFSGPREGQRPTLREPLIYIPVAGPDGNRVPLVKVSEGPLPGLAFGF
PDNETELPQEAQTITTISWSGIPQTSEYEVSCNPITHLEERGFQMRLPGTSNSATLIGLT
SGASYNVVVEAMRGGSKEKVLEEVVTVGNAVPGDIPMSTNRDVCYDTFTQTYHEVGSEWE
RMSETGFKLWCRCLGLGSGHFRCDSSKWCHDNNNNYRVGEKWDRQAENGHMMSCTCLGNG
KGEFKCEPHESTCYDDGKMYHVGNQWQKEYLGAICTCTCYGGQQGWRCENCRRPGGHTDV
DADLLQPVHSDVFDRYRENALRKLNIQCPIECLRPELLADAINPSD
NT seq
7521 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcagcagcatcgccagggtgctggttgcgctctgcatcgggagcgcggtgaac
tgcatgcccaaagggacgcacaagagtcggcgacaggcgcagcagcagcatcagagctcc
tcggtctctcaggatggttgtatagagaatggtcagctctatggcattaacgaccagtgg
gaacgcccgtatttgggcagcacactggtctgtacctgctatggagtcgctggcatcaag
tgtaaaagcaaacctgaagcagaggaaaagtgctatgataagatcaaccagcagtcttac
actgtgggagaaacctatgagagacccaaggagggcatgatttgggactgtacctgcatc
ggatcagggaggggcaagatcagctgcaccatcggcaaccgctgtcatgagggtggggct
tcatataagattggtgacacctggaagagaccccacgaaacaggaggctacatgttggag
tgtgtctgtctgggtaacggcaagggagagtggacctgcaagcctgtcgctgagcgatgc
tatgacaactcagagggcacatcctttgttgtcggggagacgtgggagaagccgtaccag
ggatggatggtggtggactgcacctgtctgggagagggaagtggacgcatcacatgcact
tccagaaatcgctgtaacgaccaggatactctgacctcccaccgtattggagatacctgg
accaagacagacgcccaaggccactcgctccagtgtctgtgcaccgggaacggccgaggg
gagtggaagtgtgagcgacatgcctcacttcataccacaggcctgggcactggctctcgt
gtgatcactaacatccagcctgcggtctaccatcccgccactgttcctgagctcacccag
gagggtccctgtcggacggacgcaggactttcgtactttatcggccagcgctggatgaag
aaccagggaaccaagcagttgatctgtacctgtcttagcaatggcgtcagctgtgaacag
tgggatggaccagctccagtgtacggtggcaactccggtggtcagccctgtgtgtttccc
tttctctacaaggggaagacctaccactcctgtatctctgaaggacgcagtgacggacag
ctttggtgttccacctcctctgactttgagacggaccagaaatactctttctgtacagag
aggaatgtaattatggcgacacgaggcggtaattcgaatggggctctgtgccagttcccc
tacctctataacggccgaaactacaccgactgtacagcagacgggcgtagagatggcatg
aagtggtgcggcaccacaatggactatgatggagaacagcgctttggattctgtcctatg
gctgacaatgaagaagtgtgtacgaccagtgaaggagtgatgtaccgcatgggagaacag
tgggacaaacggcacgacattctggctcacatgatgcgatgtacctgtgtcggcaatggc
agaggagaatggagttgtgttgcttactcccagcttaaagaccactgtattgtggacggt
ctgaacttcgaggtgaaccaaaccttcaccaaacaacacgaggagggctacacaatgaac
tgcacctgcttcggacaggggcgtggtcgctggaagtgtgacgccattgatcagtgccag
gagccggagacgagagctttctataagattggagagtcttgggataaagtcatccaagga
gtcatgtacaagtgctattgctatggcaatggcgtgggagagctcagctgcgagccccag
cagtctttccccggtggtagtcgtcctgtccaggtgatcataactgaatctggaaaccaa
cccaactcccaccctattcagtggaacgccccacaatctgctcacatcacccagtacatc
ctcaagtggaaagtgaaaaacactcccaccccatggagagaggtgatgatccctggccac
ctgaactctcacaccatctctggtctgaagccgggcatcacctacgagggtcagctcatc
agcgtgttgcggtttggacgccaagaggtcacacgctttgacttcaccaccaattacgga
tcattggcgacatcacaaggcgagaccactccacctccgcctgtggttgacatctcagag
tcggtgaccgaaattacctccagcagctttgtcatctcctgggtttccgcctccgacaca
atttctggttttagagtagagtacgagctcagtgagcagggacagggaactggacagccc
ctggtgctcgacgtgccccatacagctacctcggtgaacataaatgagctcctacctgga
aggaagtacactgttaacgtctatgaggttacagaaggcggagaggaccacctcattctt
actactacacaaaccactgcacccgatgctccccttgagcatgaagtggaggaagtggga
gaaacttccatggtgatcagctgggaaaaaccacttgctcccatcactggctatcgcatc
gtctacacgccatcaatggagggtgaaagcacggagctgactctccctgacacggcaaca
tctgtgactctgagtgaccttcgacccgggaagttgtacaacatcagtatctacgcggtg
gaggacagcctggagagcgagcctatctttgtgcaagtcaacactgccggagagccactg
ccagaagaagtttcctctcccacagacctgcagttcttcgaggtgtcggacaaaaaaatc
gtcctgacctggaccggcccagccagcgctgtgtccggctaccgggtcacctccctgccc
gtcgatgagtctgggtctccacagagggagatgactctgcccgtcagtcaaaactcctac
attgaagtgtcggacctactgcctggaacactgtaccgcttcagcgtctacaccattcac
aacggagaggaaagcttaccactcattggggagcaaagcactaagccagatgctcccaca
gatatctatttcaccaatgtgaccgaggacagcgctataatgttgtggtttgcccctcgt
gccaaaatctctggctaccggctcttcctcaccattgagggctctaaccccaagcagctg
cgcctgcctgctcgcctgtctcagtataccctcctcaacctgaagcctgatacagagtac
agcgctacgctacacgcagagcaggagaatactctgagtaaaggagagaccgctgtattt
accactaatcttccaatgggcaacgctcctcatttcagcactgatgtgactgacacctcc
attattatctcctggactccggttccccacattgaatacaagttgaccgtacgtcctagt
cagggcggagaagcccccagagatgtgacctctgactcaggaagtatctacgtttctggt
ctgaccccgggggtggagtacacctacagcgtccagccagttatcaacggccacgagcag
ggaaccccaatcacacgccgcgttgtcacacctctgtctcctccgactgatctcaacctg
gagtctaacccaggcaccggagacctcacggtccaatggaacggagccagtacaccagac
atcaccggctacagagtgacatgcactcccaccaatgggcagcaaggaaacagtgtggag
gagtttgtggaggctggccagaactcctgcaccctggagaatctcagtccaggagtggaa
tacaacatcagcgtggttactgtgaaggacgatatggagagcactcccatatcgactacc
attacacctgaagtcccaaagctgaccgacctcaccttcaaggacgtgagcgacaccacc
atcagtctcagctggtcaccgctcaacacgacggccatcactggttacaggatcacggtg
gtggcagccggcgagagtgtccccatctttgaagacatggttctgtccacgaccggccaa
tacaccgtccacggcctggaacctggtatcgactatgacattagtgtgatcactgtgacg
gagaacggcgagagcgagcccaccactgtcactcagaagacctctgtaccagcacccact
gatttgggctttgcccaggttgggccagacagtatgcaagtcacctgggtcaatcccatc
gtccccaacacagctgacatcaacagcttcctcatcaggtatcatcccattgatgatgac
gatgaccttacagaaaccagtgcaggaggcaggagtaacaacgtggtgctaaggaacttg
ctgccgaacacagagtatctggtgagcgtggtgtgtgtgtatgagcagagagagagctcg
cccctcgtcggcacacagacaacagctctggattccccggtcggcctgcgtttctctgag
atcttcaccaactccttcaccatccactggctcgctccccagagcaaaattacaggttac
cgtatccgttaccagatggtcagcggcgggagggccaaggacgagaggctgcctccgtcc
aggaaccacttcaccctgacgggactcactgcagacaccgaatacttggtcaacatctac
gcagtgagcaggtccaaagagagcctgccgctcagcgggaaacagaagacaatctccgat
gctcccacagacctggaagtcctcgactcctcccccaccagtatcaccgtccgctgggat
gctcctcctgtcactgtgcgctactacaggatcactcacggagagactggaggtcacagc
aatcctaaggagttcacagtgcctggctctcagtccactgccaagatcactaacctgaag
cccggtactgactacaccgtcaccgtctacgctgtgaccggtcgaggagacagccccgct
tccagcactccaatctatgtcatgcacaagacaagtgtggactctccctctgaaatggag
gtgatggaggtgaatgacaacagtgtcacagtgaagtggagccctgctcagggcccaatc
aaaggttacagggtgactggggtccccagaaatgggcaggggcagtctttcactgaggtt
gtggctccagaccagacggagattactttctcaggacttatgccaacagtagagtacgtg
ttgagtgtatatgctctcggacaagatggagaaagctctcctgtggtggtgaatgcttta
acaaatatagaccgtcccaaggacctgaccttctcagacatcgactccacctcactgcgc
atcacctgggacagtcctgagggaatcgtcacctcttaccgggtcacttattccagttcg
gaggagggcgagagagagctgcgacctgctcctcgaggagacgcggagtctaccgttatc
tatggtctgcaacccggcactgaatacacagtgacggtcatcgctgtgcatgatgacaca
gccagcacaccactggtcgggacacaagctacagccatttcagcccccaccaacctccag
ttctcccaggttagccctacctctttcaccatgcgctgggcggtgccgggtcaggaaaac
cgactaactggcctcaccggcctcacaggctaccgtgttgtggtgaacccaaagaacaag
agcggcccgaccaaggagatcaacttggccccggacgccacacaggcgcacatctctgga
ctcatgatcgcaactgcctatgaagtccatgtttatgccttgaaaaactctctgaccagc
aggccagtcaaaggagagatcaccaccctggagaatatcagcccccctcgtcgcgttcgt
atctctgacgttaacgactcgtccatcaccctgacgtggcgctccaagacagaaaccatc
tctggcttcctggttgaggccactcccaccacctcctctgcaggctacgtgcccattcaa
aggaccatcggccctgactcccgctccttcgttattacaggtctggagccaggcaccaat
tacaagatcaacatctatacactgaaagggaacggacgcagtgcacctctcacactcact
gccaccactgccaaaccgttggtcatcccgcccaccaacatccgcttcacctccctgaac
ccaaacagcatctctttcacctgggagccgtcacgcagtccgagggttactgggtattat
gtcacctatgaggaggccgggggtttgcctcgggagattgtccccagaccgcatgcaggc
cagagctatgccattatcaacggtctgaagccaggaacagagtacgtcattaagattgtc
gcgctgcagaattctttgagaagcacacctctagtgggcaaagccagaacacagccagct
ccagatcgtcatctattggtccccgagctgccacagcttcccgttcctcaccgacccacc
actgacatcctggatgttcccgagtccttcaatgacaagatttttgacaccaaccaggtt
cacttgactggcactagtggccagaaccaaccaggccagcagggccagcacatctatact
gagtaccagagtctaggccccaataacggacttcatggccccttcagtggacccagagaa
ggccagagaccgactctcagagaacctctgatctatattcctgtagcaggccctgatgga
aacagagtacctttggtcaaggtgagcgagggtcccctgcctggtcttgcatttggtttc
cctgacaatgaaaccgagttgccccaggaagcgcagaccatcacaaccatctcctggtct
ggcattcctcagacttcagagtacgaggtgtcctgtaatcctattacacacctggaagaa
agaggctttcagatgcgtcttcccggcacctccaacagtgctacactgattggattgaca
tccggagcatcctataacgtcgtagtagaggccatgaggggcgggtctaaagagaaggtt
ttggaggaagtcgtaactgttggcaatgccgttccaggtgacatccccatgtccaccaac
cgggatgtgtgttacgacacattcacgcagacgtaccacgaggtgggctcagagtgggag
cgcatgtctgagacgggcttcaagctgtggtgccgctgccttgggctgggcagcggccat
tttagatgtgattcatccaagtggtgtcacgataacaataataactaccgcgtcggagag
aagtgggatcgccaggctgagaacggtcacatgatgagctgcacctgcctgggcaacggc
aagggagaattcaaatgtgaaccccatgagtcaacatgttatgacgatgggaaaatgtac
catgtgggaaaccagtggcagaaggaatacctgggcgccatctgtacttgtacgtgctat
ggaggacaacagggatggcgttgtgagaactgcagaaggccgggcggacacacggatgtg
gacgctgacctccttcaacccgttcattcagacgtcttcgaccgttacagagaaaatgct
ctacgcaagctgaacatccaatgtccgattgaatgtttgaggccggagctgctcgcagac
gccatcaacccctcagattag
DBGET
integrated database retrieval system
