Clinocottus analis (woolly sculpin): 137782642
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Entry
137782642 CDS
T10471
Symbol
lmo7a
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04517
IgSF CAM signaling
cana04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
137782642 (lmo7a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
137782642 (lmo7a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cana04121
]
137782642 (lmo7a)
Ubiquitin system [BR:
cana04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
137782642 (lmo7a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
CH
LIM
PDZ_6
PDZ
PDZ_2
eIF_4G1
Motif
Other DBs
NCBI-GeneID:
137782642
NCBI-ProteinID:
XP_068428212
LinkDB
All DBs
Position
Unknown
AA seq
1454 aa
AA seq
DB search
MEWRERSAVSCDEAYEEAQRWIEAVTNKKFGSEDFRSALENGVLLCDLINKITPGVIRRV
NRLPTPIAGLDNLNVFLKACRKLGLKEAQLFHPGDLQDLSTRVTVKHQETNRRLKNVLIT
IYWLGRRAQCDRFYDGPNLNLKAFEGLLGTALYKALQESSGQKGSNVRDSGFGDSWCSER
EELFQLREEGGGRGGHRRDDSLDSLDSLSSRSQSISSDTTLKGSTEGCCSDTEADSVFRM
AENKSSLSYRRSVTLTPKATSQFNQFLPSKDKPTTYVPAPLRKKRAERNEESRRSWANPM
YTENEAMLTRQQQAQESIGGSKSTSDIQVDSSINRQARYEELQKYREQTKETDDKWQDDL
SKWKSRRKSVNSDIVKKKEEREKIELSTSGSRRSKTFKEMQEERENKGKNSIGGRLGSLS
YLDNEDVFDEPVVTPRTRTLPARSYTIDTPYYSSGSPEPPLKEDEPPAASPATGRAASPP
TSQGTDTLDSPAGRDTAATTTTTTTTPTPTSRNFFHRSQSLAPAAAAAAPLQSPVLERSS
TVKSVESAAAVSSSRSLRKLPEVRPPLLRAQTEAGAPSSGSLYKQQPHLGSMEPKPPGAS
RVSASLPRSYQRPDSARLTSIVAPRPFGTQSSRLTSLPRALTVDDPQKRVNGDGDTSKKS
TVPSRYHQFMTSEDELQSQSSSAHSSEDEEEEEEEDKTTTNSVTSIQSISSTQTISYPQS
ISSPQSVSSTQSVSPVHPQVKTRAPVSPAPAKETSQENFCELRISLNQKPNSSRDFGFQT
AWDSTGAHVASIQPGSPAEMCQLQAGDEVLTVNGHQVAEMSYSDWKSSMDEALQEGSLIM
DIRHHGRNNWDRDQPPMPFKSHKTINLTSMDHPILLGFPDISSSLDLTSRASMEKPAPKE
APAHTVLDVASNGVNGGFREPAVTLRNKESEPMSLKNLKRRSEFFEKGGSESAMPDIPVP
SITPSSSRWSWDPEEERRRQEKWQKEQERLLQEKYKRDQEKLQEEWLKDQEEVAKSVGQQ
EPGILEVIRGTGGSLSPLSPVDQPTTPSWEEQERKEKEEQERKWKEEQEHQRQAEERRKR
EEEERELRRLQEQREMRDRQQRQEEEMKRREEEELRWQKRKEEERAEERRRQEAAELQRR
ERERALAEQQRQQQQQQWAAGFANVPPSLSFTDRTKSQSSPQLDEEEKPQRKVTGVVAAE
KKGPQSASQAEQERQQILNEMKKKTPLLTDKSWIRQRSSTTSAATTKESDVPPMRRGESL
DNLDSSYNSWRSSWTGRNNSHTQSYAQSYSRPNSALSGSAAFYGGGWSGAQRPASSAPRP
ASSTLPSSYSMGSLWTGAGTPSSPWSRQSPSPSPSSPSPTTSPEPTSEGGPPQQRSRSVS
GRKVCTFCDTPLGKGAAMIIESLGLCYHLSCFKCIDCKSDLGGSAAGAEVRIRSKQLYCN
TCYTRFKAGQPTTM
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atggagtggcgcgagcggtccgccgttagctgcgacgaagcctacgaggaggcgcagaga
tggattgaggcagtaaccaataaaaaattcgggagcgaggacttccgatcagcgctagag
aatggagttctgctgtgtgatctgatcaacaagatcacgccgggtgtcatcaggagggtt
aacagactgcccacacctatcgctggactggacaacctcaacgtcttcctcaaagcctgc
aggaagctcggactaaaggaggcgcagctctttcacccgggagatctacaggacttatcc
acgagagtcacagtcaagcatcaagagaccaacaggaggctgaaaaatgtgctgatcacc
atttactggcttggtagaagagctcagtgtgaccgattctatgatggacccaacctgaat
ttgaaggcgttcgagggcttattgggcacagcactatataaggctctgcaggaatcgtcc
ggtcagaaaggcagtaacgtcagagacagcggttttggagacagctggtgctcagagcga
gaggagctcttccaactgcgagaggaaggaggaggaagaggaggacacaggagagacgac
tccctggacagcttggactctttgagctcccgatcacagagcatctcctctgacaccact
cttaaaggcagcaccgagggttgttgcagcgacaccgaggccgactccgtcttcaggatg
gcggaaaacaagagcagtctcagttaccgccggtcagtgacccttacgcccaaggccacc
tcgcagtttaaccagttcctgcccagtaaagacaaacccacgacctacgtgcccgctccg
ctgaggaagaaacgggccgagcgcaatgaggaaagccggcgcagctgggccaaccccatg
tacacggagaacgaagccatgctcaccagacagcagcaagcgcaagagagtatcggcggg
agtaaatcaaccagcgatatccaggtggactccagcatcaaccggcaggctcgctacgag
gagctgcagaagtaccgcgagcagacgaaggagacggatgataagtggcaggatgacctg
agcaaatggaagagccggcgcaagagtgtcaactctgatatcgtgaagaagaaagaggag
agggagaagatagagctgagcacgtccggcagcaggaggtccaagaccttcaaggagatg
caggaggagagagaaaataaaggaaagaacagcatcggcggtcgccttggatctctatct
tacctggacaacgaagacgtattcgacgaacccgtcgttactcctcggacccgaaccctc
cccgccaggagctacaccattgacactccttactattcctctggatcccctgagccccct
ctgaaagaggacgaaccccccgccgcctccccggctactggcagggccgcttcccctccc
acctcacagggaactgacactctggacagtcctgcaggcagggacaccgccgccaccacc
accaccaccaccaccactcccactcccaccagccgcaactttttccacaggtcccagtct
ctggcaccagcagcagcagcagcagcacctttacagagtccagtcttagaacgcagcagc
acagtaaagtcagtggagtcagcggccgccgtctcctcttcaagatccctgcgaaagttg
cccgaggtgaggcccccattgttgcgtgcgcagactgaggcgggggccccctcctctggt
tctctgtacaaacaacaaccacatctcggctcaatggaacccaagcctcccggggcgtct
cgggtttccgcctccctccccagaagctaccagagaccggatagcgcacgtctgacctcg
atcgtcgcgccacggcccttcgggacccagtcatcccgcctgacctctcttccccgagcc
ttgacagtggacgacccccagaagcgtgtcaacggtgacggcgacacttctaagaagtcg
acggtgccgagccgctatcaccagttcatgacctctgaggatgagcttcagtctcagtcc
agctcggcccacagcagcgaggatgaggaggaggaagaggaagaggacaagaccacaacg
aacagcgtcacttctattcagagcatctcctctacccaaaccatctcttatcctcagagc
atctcctctcctcagagcgtctcctctacccagagcgtctctcccgtccatcctcaggtc
aagaccagagccccagtcagtcctgctccagccaaagaaaccagccaggagaacttctgt
gagttgcggatcagcctgaaccagaagcccaacagcagcagagactttggcttccagacg
gcctgggactcaacaggagctcacgtcgcatccatccagccaggcagcccggcagagatg
tgccagcttcaggccggggacgaggtgttgacggtgaacgggcaccaggtggcagaaatg
agttactcggactggaagtccagtatggatgaggccctgcaggagggcagtctgatcatg
gatatacggcaccatggcaggaacaactgggacagagatcaacctcccatgccatttaaa
agccataagaccatcaatctgaccagtatggatcatccgatacttctaggtttccccgac
atcagctccagcctggatctcacctcgcgcgcctccatggaaaagccggcgcccaaagaa
gcccccgcccacacagtcctcgacgtagcttccaacggagttaatggaggtttccgtgag
ccagcggtgaccctgaggaacaaagagtcagaacccatgtctttgaaaaacttaaaacgg
aggtcagagttttttgaaaaagggggatcagagtctgcgatgccagatatacccgttcct
tccatcaccccgtcctccagccgctggtcttgggacccagaagaggagcgcagaagacaa
gagaaatggcagaaggagcaggagcgcctccttcaggagaaatataaacgcgaccaggag
aagttgcaggaggagtggctcaaggatcaggaggaggtcgccaagagcgtgggccaacaa
gagcccgggatcctggaggtgatcagaggcaccggcggttcactctcgcccctgtctcca
gtcgaccagcccaccacgccttcgtgggaggagcaggagaggaaagagaaggaggagcag
gagaggaaatggaaggaggagcaggagcaccaacggcaggcggaggagaggaggaagagg
gaggaggaggagcgcgagctgcggcggctccaggagcagagggagatgagagacaggcag
cagcggcaggaggaggagatgaagaggagggaggaggaggagctgaggtggcagaagagg
aaggaggaggagagggcggaggagaggaggcggcaggaagctgcggagctgcagcgcagg
gagagagagagagccttggccgagcagcagcgtcagcagcaacagcagcagtgggccgcc
ggctttgccaatgtcccgccgtccctgtccttcacagacaggacaaaatctcaatcatct
ccccagcttgatgaagaggagaaacctcagagaaaagtgacgggcgtcgtggcggctgag
aagaagggtccgcagtcggcgtcgcaggcggagcaggagcgccagcagatcctgaacgag
atgaagaagaagactccgctgctgacggacaaaagctggatccgccagcgctcctccacc
acctccgccgccaccaccaaggagtctgacgttccacccatgcgcagaggcgagtctctt
gacaacttggactcctcctacaactcctggcgctcgtcgtggacgggcagaaacaactcc
cacacccagagctacgctcagagctactctcggcctaactcggcgctctccggcagcgcc
gccttctacggcggcgggtggtcgggggcccagcggcccgcctcctcggccccgcggccc
gcctcctcgaccctgccttcctcttactctatgggctccctgtggaccggggcgggaacc
ccctcgtccccttggtcccggcaatcgccgtccccgtcgccgtcctctccgtcacccacc
acctccccagagcccacgtctgagggaggccccccgcagcagaggagcaggtcagtgagt
ggcaggaaagtctgtacgttctgtgacaccccgctggggaagggagcggccatgatcatc
gagtccctcgggctctgttatcatttgagctgctttaagtgcatcgactgcaagtctgac
ctcggaggttcagcagccggcgccgaggtcagaatacgaagcaagcagctctactgtaac
acctgctacacgcgatttaaagccggccagccaaccactatgtga
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integrated database retrieval system
