Clinocottus analis (woolly sculpin): 137782658
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Entry
137782658 CDS
T10471
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
137782658 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cana03400
]
137782658 (xrcc5)
DNA repair and recombination proteins [BR:
cana03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
137782658 (xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
DUF6005
VWA
Motif
Other DBs
NCBI-GeneID:
137782658
NCBI-ProteinID:
XP_068428249
LinkDB
All DBs
Position
Unknown
AA seq
724 aa
AA seq
DB search
MAGAKSALVLCMDVGSSMSNSAPGEEPSFELAKKVIQKFVQRQVFAETKDELALVLFGTE
STENPLDNDGQYQNITVHRHLMIPDFELLEEIENQVHPENHQADWLDALVVCMDLLQKET
KGKKCDRLNISLLTDLNTPASSEQIDVIIENLKQAGITLQFFLPFPVEDDEESRGDADRR
SPGHPGMGKGLSKEQKSSVDIVKHIMLNLDEENGLDEIYSFRNAIEQLCMFKRIERKPMA
WPCQLTIGSCLSIRIVGYKAVTEEKLKKSWTTIDAQTNKKDDVKKETVYCLDDDNETEVQ
GEDTIQGFRYGSDIVPFSKVDQEQMKYQHDGKCFAVLGFAKQNQVRRHQFMGNQVIKVFP
AKDDEHAGVALSALIQALDELNMVAIVRYAYARNANPQVGAAFPCIKKDHECLIYVQLPF
MEDLRQFTFPSLENNKKFTPSDTQLSAVDSLIDSMMLIEEDDNGCKKDMFKVHQIPNPAF
QRHFQCLHHRAVSPGTPLPPIEPWLKAALECPVVITERCQGPLKEVKRKFPLTEVEKKKK
LKTSADIFGKDSEEPDAKMAKEDEEEDYNLADIAEGNVTSVGSVDPARDFRTLIKKKSPP
FGEVCQQLTRRIEQLLSNKNTPYYMKSITCIQAFREQSVKLGDANLYNGYLQSLKRSIPN
RGLEVFWDLLVQDALTLISKDEVEGSNVSKTDANQFLVTDEKKKEEAAPPAEDTGDVDDL
LDMM
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcgccaaatcagcgttggtgttgtgtatggatgttgggtcctccatgtccaac
tctgccccgggtgaagagccttcttttgaacttgctaaaaaagtaatccagaagtttgtc
cagcgccaggtttttgcagagaccaaggacgaactggctttagttctgtttggcacagaa
tccaccgagaacccattggacaacgacggccagtaccagaacatcactgtacatcgtcac
cttatgatccctgatttcgagcttcttgaggaaatagagaatcaggtccatccagagaat
catcaggctgattggctggatgctcttgttgtgtgcatggatctccttcagaaagaaaca
aaaggaaagaagtgtgatcgtctcaacatttctctcctgactgacctcaacactccagcc
agctcggagcagatagacgttatcattgaaaacctgaaacaagcgggcatcaccctgcag
tttttcttgcctttccctgtggaggatgatgaagagagtagaggggatgcggacagaaga
agccctggtcacccgggcatgggcaaaggtctctccaaggaacagaagagcagcgtcgac
atagtgaaacacatcatgctaaacctcgatgaggagaacggcctggatgaaatttactcc
ttcaggaatgcaattgagcagctgtgcatgttcaagcgtatcgagaggaaacctatggcc
tggccctgtcagctgaccatcggcagctgtctttccatccgtattgttggatacaaagca
gtgacagaggagaaacttaagaaatcgtggactacaattgatgcccaaaccaacaagaaa
gatgacgtgaagaaggagactgtctattgtctggatgatgacaatgagacagaggtgcag
ggggaagataccatccaaggttttcgttatggaagtgatatcgttcccttctccaaagta
gatcaagaacagatgaaataccagcatgatgggaagtgctttgctgtccttggcttcgcc
aaacagaaccaggtacgccgccatcagttcatggggaatcaagtcatcaaggtgtttcct
gccaaggatgatgagcatgcaggagttgcgttgtccgctcttatccaagccttggatgaa
ctcaacatggtggccattgtacgttacgcctatgcccgtaacgcgaaccctcaagtggga
gcagccttcccctgcatcaagaaggaccatgagtgtctgatctacgtccagctgcccttc
atggaagacctgaggcagtttacatttccttctcttgaaaacaacaaaaagttcactccg
tcagacactcagctgtctgctgtggactctctcattgactccatgatgttgatagaggag
gatgataatggatgcaaaaaggacatgttcaaggtccaccagattcccaaccctgccttt
cagaggcacttccagtgtctgcatcatcgggcagtgagccccggcacccctcttcctccc
atagagccatggctgaaggctgctcttgaatgtcccgtggtcattactgaacgttgccag
ggtccccttaaggaggtgaagaggaagtttcctctcacagaagtggagaagaaaaagaag
ctgaagacaagtgcagatatttttggcaaagactctgaggagccagatgccaagatggca
aaagaagacgaagaggaagattataaccttgctgacattgccgaaggcaatgttacttcg
gtgggaagcgtggatccagccagagacttccggactctgatcaagaagaagagtcctcca
ttcggagaggtctgtcagcaactgactcgcaggatagagcagttgcttagcaacaagaac
acaccgtattacatgaaaagcatcacctgcatccaggcttttagagagcagtcggttaag
ctgggggatgccaatctgtacaatggttaccttcagtctctgaaaagaagcatcccaaac
agagggctggaggtcttctgggacctgcttgttcaagatgccttaactctgatcagcaag
gacgaggttgaaggaagcaatgtatccaaaaccgatgctaatcagtttctggttactgat
gagaagaaaaaggaggaggctgcaccacccgctgaagatactggagatgttgatgacttg
ctggacatgatgtaa
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