Clinocottus analis (woolly sculpin): 137782701
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Entry
137782701 CDS
T10471
Symbol
nfkb1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04010
MAPK signaling pathway
cana04210
Apoptosis
cana04218
Cellular senescence
cana04620
Toll-like receptor signaling pathway
cana04621
NOD-like receptor signaling pathway
cana04622
RIG-I-like receptor signaling pathway
cana04623
Cytosolic DNA-sensing pathway
cana04625
C-type lectin receptor signaling pathway
cana04920
Adipocytokine signaling pathway
cana05132
Salmonella infection
cana05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
137782701 (nfkb1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
137782701 (nfkb1)
04218 Cellular senescence
137782701 (nfkb1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
137782701 (nfkb1)
04621 NOD-like receptor signaling pathway
137782701 (nfkb1)
04622 RIG-I-like receptor signaling pathway
137782701 (nfkb1)
04623 Cytosolic DNA-sensing pathway
137782701 (nfkb1)
04625 C-type lectin receptor signaling pathway
137782701 (nfkb1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
137782701 (nfkb1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
137782701 (nfkb1)
09171 Infectious disease: bacterial
05132 Salmonella infection
137782701 (nfkb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cana03000
]
137782701 (nfkb1)
Transcription factors [BR:
cana03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
137782701 (nfkb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_5
Ank_3
Ank_4
Death
Motif
Other DBs
NCBI-GeneID:
137782701
NCBI-ProteinID:
XP_068428347
LinkDB
All DBs
Position
Unknown
AA seq
956 aa
AA seq
DB search
MAGEEHYLNTSSTQIFDNMGMEQLWDFTHFPVMSQNPSLQTVDGPFLQIVEQPKQRGFRF
RYGCEGPSHGGLPGASSEKNSKTYPAVKISNYQGPARVVVQLVTALTPQPQLHAHSLVGK
QCDKGVCVTDLQPKDSNISFPNLGILHVTKKNVAKTLEDRMAEAFRLGFNCGVCIHPDID
ALQGEVRVPRELTEHQRSVICSAASLQAKEMDLSVVRLMFTAFLPNSDGGFSRRLEPVVS
EPIYDSKAPNASNLKIVRMDRTAGCVSGGEEVYLLCDKVQKDDIQVRFYEEDNSGVTWEA
MGDFSPTDVHRQFAIVFKTPKYRDQNLLKPTSVFVQLKRKSDNETSEPKPFTYHPQIIDK
EEVQRKRQKTLPNFQDFSGHGGGGSLYRGGGGGGPAAGGGPGSAGGGGGYFQSFTTYNYG
GGGGGGFSTGYSAGLGGGGGGGGVQAGGGGEGIKHQEKQQQGDAADDSDPDDDSGPGVTP
RAAARPGGPEAGERTEEGGVSVEEPEDEAAAAQLEALFRYSVTGDSAYLLAAQRQLMAAQ
DEDGDTGLHLAVLHSQQEALKSLTQVVSALPGEEVLNMRNHLYQTPLHLAVITQQREAVE
ALLLAGADPTLTDRHGNTALHLASRLGGEGGRGGGGGGGGGGIVQLLLQHGQMRELLDQT
NTAGLCAIHLAVLANQLSSLRELLVGGASVEAQERGGGRTALHLATERDNVSLAGCLLLE
GNAEVDCFTFNGSTPLHVAAGRGSVKLTALLMAAGADPQKENFEPLFFREDCCDEDREDE
DEDEGYIPGTTPLNMAATTQVLELLNGKEYEPKCPQKAIPPSQGDLASLDLEVKQQVCRA
LESKGCWEKLSHSLGLGILNTAFRLSPSPAKTLLDSYEVSGGTVRDLLAGLGSVGECRAL
SILQEALRRRDEEKEEEEEEEEEEEETSGESRLQDPKVDVRMDSGVCDSGVELSTA
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggctggagaagagcattaccttaatacttcctccacgcagatcttcgacaacatgggg
atggagcagctgtgggatttcacacacttccccgtgatgtcacagaacccgtcgctgcag
acagtggacggaccgttcctgcagatcgtggagcagcccaaacagcgcggcttcaggttc
aggtacggctgtgaggggccgtcacacggcggcctgccgggagcctccagcgagaagaac
agcaagacttaccccgccgtcaagatcagtaactaccagggtccggcccgcgtggtggtg
cagctggtgacggcgctgacaccgcaaccgcagctgcacgcgcacagtctggtggggaag
cagtgcgacaaaggagtgtgtgtcacggacctgcagcccaaagactccaacatcagtttt
cctaacctgggcatccttcacgtgaccaagaagaacgtggcgaagactctggaggaccgg
atggccgaggccttcaggctcggcttcaactgcggcgtctgcatccaccccgacatcgac
gcgctgcagggggaggtgcgcgtgccccgagagctcaccgagcaccagcgcagtgtgatc
tgcagcgctgcgtcgctgcaggccaaggagatggacctcagcgtggtccggctcatgttc
accgccttcctgcccaacagcgacggaggattctccagacgactcgagcccgtcgtgtcg
gaaccgatctacgacagcaaggctccgaacgcttccaacctgaagatcgtgaggatggat
cgaaccgccggctgcgtgagcggaggagaggaagtctacctgctctgtgacaaagtccag
aaagatgacattcaggttcggttctatgaagaagacaactcaggggtgacctgggaggct
atgggagatttctccccgacagacgtccacagacagttcgccatcgtgttcaagacgccg
aagtatcgagaccagaacctcctgaagccgacgtctgtgttcgtccagctgaagaggaag
tctgacaacgagaccagcgaacccaaacccttcacctaccacccgcagatcatcgacaag
gaggaggtgcagaggaagagacagaagacgttgcccaacttccaggacttcagcggccac
ggaggaggtggaagtctgtaccgaggaggaggtggaggaggacctgctgcaggtggagga
cctggctctgcaggaggaggaggaggttacttccagagcttcactacctacaactatggc
ggaggaggaggcggaggtttctccacaggatactcagctggtctgggaggaggaggagga
ggaggaggagtacaagcaggaggaggcggcgaaggcatcaaacaccaagagaagcaacaa
caaggcgacgcggcagacgacagcgatccagacgacgactcggggccgggggtcacgccg
agagctgcagcccggccaggaggccccgaggccggggagaggactgaggagggaggggtc
agcgtggaggagcccgaagacgaggcggccgccgcgcagctggaggctctgttccgctac
tcggttacgggcgactcagcgtacctgctggctgctcagcgtcagctgatggcggcgcag
gacgaggacggagacactgggctccacctggcggtcctccacagccagcaggaggcgctg
aagagcctgacgcaggtggtctccgctctgcccggagaggaggtgctcaacatgaggaac
cacctctaccagactcctttgcacctggccgtgatcacccagcagagggaggcggtggaa
gcgctgcttctggccggcgccgacccgacgctgacggatcgtcacggcaacacggcgctg
cacctggcgtcccggctgggaggtgaaggtggacgaggaggaggaggaggaggaggagga
ggggggattgtccagcttctgctgcaacacggacagatgagagagctgctggaccaaacc
aacacagccggcctgtgtgccatccacctggccgtcctggccaatcagctgtcttcactc
agggagctgctagtgggcggagccagcgtggaggctcaggagcgcggcggcgggcgcacc
gccctgcacctcgccaccgagagggacaacgtgtcgctggccggctgcctgctgctggag
ggaaacgctgaggtggactgcttcaccttcaacggctccacccccctccacgtggctgca
gggcggggctccgtcaagctcacggctcttctgatggctgcaggtgcagaccctcagaag
gagaactttgagccgctcttcttcagggaggactgctgtgatgaagacagggaggatgag
gatgaagatgaaggctacatcccaggaaccactcctctcaacatggccgccaccacccag
gtgttggagcttctgaatggaaaagaatatgaaccaaaatgtccacagaaagccattccc
ccttctcaaggcgacctggcgagcctggacctggaggtgaagcagcaggtgtgtcgcgct
ctggagagtaaaggatgctgggaaaaactgtctcacagtctgggtctcgggatcctcaac
acggccttcaggctgagcccctcccccgccaagacactgctggacagctacgaggtttca
ggcgggacggtccgggacctgctggccggtctcgggtccgtcggcgagtgcagagcgctg
agcatcctgcaggaggcgctgcgtcgccgggatgaggaaaaggaggaggaggaggaggag
gaggaggaggaagaagagacgagtggtgagtctcggctccaggaccccaaggtggatgtc
cggatggacagcggcgtctgcgacagcggggtggagctctccacggcgtga
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