Clinocottus analis (woolly sculpin): 137782780 Help Entry 137782780         CDS       T10471                                  Symbol col5a2a Name (RefSeq) collagen, type V, alpha 2a   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism cana  Clinocottus analis (woolly sculpin) Pathway cana04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cana00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     137782780 (col5a2a)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:cana00536]     137782780 (col5a2a) Glycosaminoglycan binding proteins [BR:cana00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    137782780 (col5a2a) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC TILa Motif Other DBs NCBI-GeneID:  137782780 NCBI-ProteinID:  XP_068428497 LinkDB All DBs Position Unknown AA seq 1495 aa AA seqDB search MMGSVHIRTFLFLVVSVAQVLIVTSQDVNSGDDASCTADGQVYTNRDIWKPEPCRICVCD NGQVLCDEIQCDELTNCEKMSIPDGECCPVCQTDAATSGGQDTYGGGERIYKGPKGEPGE VPLVTGIRGRPGPMGPPGHPGDRGSRGHKGRPGLRGPAGYDGEPGIPGQPGEPGPPGPPS HPGGLGSQMAGVMDGKMGPQAMLTGSRGEAGARGPPGPSGTPGHAGPQGPPGDVGDPGHM GPSGQRGPDGPPGKPGEDGEAGKPGNSGETGFPGSQGGRGFPGTPGPPGLKGNRGHGGII GQKGETGTVGSKGATGPPGPLGGPGPMGPAGMPGERGRSGPGGIAGKRGMPGNLGKPGPM GPLGLSGPTGYPGTPGMKGQAGPTGVRGPEGPQGQRGESGHLGRAGPVGLTGPMGTDGGP GSKGPVGNLGPQGPGGHAGPFGPPGPQGSTGQPGIKGQLGDIGVGGFKGEAGPKGESGPS GSQGVLGPQGEEGKRGQRGDSGTLGPPGPVGERGAPGNRGFPGADGLPGPKGAQGDRGTS GPPGPKASVGDPGRTGEPGLPGARGLTGTPGVQGAEGKPGPLGAAGEDGRPGPAGSIGNR GPAGIMGGPGPKGFNGDPGKTGEQGSAGVLGQRGPPGKDGEVGPAGPAGPSGVAGERGEQ GPPGVNGFQGLPGNQGPPGESGKPGDLGIPGELGVVGQIGPRGERGIPGERGELGTTGLQ GPKGIPGAPGPDGPKGSPGPTGTLGDSGPPGLQGMPGERGISGAPGPKGDRGSLGEKGSE GTAGNDGARGLPGPVGPLGPAGPSGEKGEPGPKGPHGPPGSRGMPGSRGDPGPIGAVGFA GSPGPDGQPGVKGEPGEPGQKGDAGSSGPQGLSGAHGPQGPAGVAGLKGGRGTQGAPGPT GFPGSAGRVGPPGPTGPLGEAGPLGPPGKEGPLGLRGDHGSPGRQGERGPAGPTGSTGDK GDSGEDGPTGPDGPPGPDGTTGQRGIVGLPGQRGERGMPGLPGPGGPPGKQGATGTSGDK GPSGRVGAPGANGPRGDPGPDGPSGSDGPPGKDGVLGQRGDRGDSGPEGLVGSQGLPGTP GPVGASGDAGRRGDAGSRGPVGPPGSAGKRGLGGPQGPRGDKGDLGDHGERGQKGHRGFT GLQGLPGPPGTTGEQGAPGIVGPSGPRGPPGPIGPSGKEGYIGQPGPMGPPGTRGISGEI GPEGPPGEGGPAGPPGPPGPPMAAMDDLFGNQDYDFGPPPPPEFNEDEAMPNSNSTTIVP IDPGVQATLKALSSQINSMKSPDGSKKHPARTCDDLKRCYPAKKSGEYWVDPNQGSVEDA IKVHCNMDTGETCISANPSSIPRKVWWSSSRNKPVWFGADINRGTHFTYGNKEQPANSVT VQMTFIRLLSKEASQSITYNCKNSVGYKDEKTGNYKKAVVLKGSNDLELKAEGNNRFRYT VVEDSCAQANGKWGKTVFEYRTQKTARLPIVDMAPVDIGGPDQEFGIDIGPVCFL NT seq 4488 nt NT seq  +upstreamnt  +downstreamnt atgatgggctctgtgcatataaggactttcctttttctggtagtctccgtggctcaagtt ttgattgttacaagtcaagatgtgaacagtggagatgacgcgagctgcacggcggacggc caggtgtacaccaacagggacatctggaagccggagccatgccggatctgcgtgtgtgac aacggtcaggtcctctgcgacgagatccagtgcgacgagctgaccaactgcgagaagatg tccatccccgacggcgagtgctgccccgtctgtcagacggatgcggcgaccagcggcggg caggacacctatggcggtggagagaggatctacaagggtccgaagggagaacccggggag gtcccactcgtcactggcatcagaggccgccctggacccatggggcctcccggccatcca ggagacagaggatctcgcggacacaaaggaaggcctggactgcgaggccccgcgggttac gatggagagcctggtataccgggtcagcccggtgaacccggacctcccggacctccgtcg cacccaggaggcctgggatcccagatggccggagtgatggatgggaaaatgggacctcaa gccatgctgactggctcaaggggagaggccggagcaagaggacctcctgggccaagtggg acacctggtcacgctggaccccaaggacctcctggagatgttggtgatccaggacacatg ggtccaagtgggcaaaggggaccggatggccctccagggaaaccaggtgaagatggagaa gcaggcaaaccaggaaatagtggagaaactggattccctggatcacagggagggagagga tttcctggaacgcctggacctcctggactgaagggtaacaggggccatggaggaataatt ggccaaaaaggtgaaactggaaccgttggatccaagggtgctacaggacctcctggtcca ttgggaggacctggacccatgggtcctgctgggatgcctggagagagaggacgctctgga cctggcggtatagcaggtaaacgcggtatgcccggtaacctcggaaagcctggtccaatg ggtccattgggtctcagtggtcctactggatatccaggaacaccaggaatgaagggacaa gctggcccaactggagtaagaggtccagaaggccctcagggacagagaggagagagcggc catctgggccgagcgggacctgttggcctcacgggacccatgggtacggatggtggcccg ggtagcaaaggacccgtgggtaatcttggtcctcaaggtccaggcggccatgctggaccc tttggcccaccgggacctcagggaagcactggtcagcccggtatcaaagggcaactggga gacattggtgtcggaggatttaaaggagaggctggacccaaaggagaatctggtccctca ggctctcagggagtgctcggacctcagggtgaagaaggaaagcgaggacaacgtggagac tccggcactctcggacctcccggtcccgtcggagagagaggagctcctggtaacagggga ttccccggtgctgatgggttgccaggaccgaagggtgctcaaggagatcgtggaacatct ggcccgccagggcccaaagcttctgtaggagacccagggcgtacaggagaacctggtctt ccaggtgcaaggggtcttactggtacccctggagtccagggagcagagggaaagccagga ccattgggagctgcaggtgaagatggtcgtccaggccccgcagggtccattggaaacagg ggcccagcaggaatcatgggagggccaggccccaagggcttcaatggtgacccaggaaag acgggcgaacaaggatccgcgggagtgttaggccaaagaggtcctcctggaaaagatgga gaagttggtcctgctggccccgctggcccatctggtgtcgcaggagaaagaggagaacag ggaccacctggtgtaaatggattccagggtttacccggaaatcaaggccctccgggagaa tctggaaagccaggtgaccttggtattcctggagagctcggcgttgtgggtcaaattgga ccgaggggagaacgtggtattcctggggagagaggagagctgggtacaactggtctgcag ggacctaagggtatccctggagcgcctggtccagatggaccaaagggtagtcctggtccc actggtacacttggagactcgggtcctccaggtcttcagggaatgccaggagagaggggc atctctggcgctcctgggcctaaaggtgacagaggatcacttggtgagaaaggatcagaa ggtacagctggaaacgatggcgcaagaggactcccaggtcctgttggcccgctaggacct gctggacccagtggtgagaagggagaacctggacccaaagggccacatggacccccagga tccagaggaatgccaggatcaagaggagaccccggccccatcggcgctgttggctttgct ggatctcctggtcccgatggccaacctggagtcaagggagagcctggagaaccaggtcaa aaaggagatgctggatcatcaggacctcaaggcttgtcaggtgctcacggacctcagggg ccagctggtgttgctggactgaaaggtggaagaggaacacagggggcaccgggccccact ggtttccctggatctgcaggacgagtcggcccaccaggcccaactggtccacttggagag gccggaccccttggacctccaggaaaagagggtcctctcggtctgcgtggagaccatgga tctcctggaagacaaggagagcgaggaccagccggaccaaccggcagcacgggagacaaa ggggactctggagaagacggacccacgggtcccgatggtcctccaggcccagatggaact acaggacagagaggcattgtgggtcttcctggtcagagaggggagcgtgggatgccaggc cttccaggacccgggggtcccccaggaaaacagggagccacaggaacatccggagataaa ggcccctcgggtcgcgttggcgctcctggtgcgaacggccctcgtggtgatcctggtcca gatggtccttcaggatctgacggcccgccgggcaaagacggtgttctcggacaaagagga gaccgaggagattctggtccagaaggtttggttggttctcagggacttccgggcactccg ggtcctgtcggtgcgtcgggggatgctggaaggagaggagatgctggctccagaggacct gttggtccacctggctcagctggaaagagaggattagggggaccccaaggaccaagaggg gataagggtgacctgggagatcatggagagagagggcagaaggggcatcgaggcttcaca ggtttacagggtcttccaggacctccaggtacaacaggtgagcagggagctccaggaatc gttggaccaagcggaccgagggggcctcctggacccattgggccttctggaaaggaagga tacattggacagccaggaccgatgggacctcctggaacccgtggaatcagtggagaaatt ggaccagagggccctccaggagagggtggacccgctggcccacctggtccgccaggacct cccatggccgccatggatgacctcttcggcaatcaggattacgacttcggcccacctcct cctcccgagttcaacgaggacgaggccatgcccaacagcaactccaccaccatagtaccc attgaccccggcgttcaggccaccctgaaggccctcagcagccagatcaacagcatgaag agccccgacggcagcaagaagcaccctgccaggacctgtgacgacttgaagagatgctac cccgcgaagaagagtggggagtactgggtggatccaaaccaaggcagcgtggaggacgcc atcaaagtgcactgcaacatggacaccggggagacctgcatctctgccaacccttccagc atacctcgcaaagtgtggtggagctcttccaggaacaaacctgtgtggtttggagccgac atcaaccgtggaacacatttcacttacggcaacaaggaacagccggcgaactctgtcaca gttcagatgactttcatccgcctgctctccaaagaggcatctcagagcatcacctacaac tgcaagaactctgtgggctacaaggacgagaagacgggcaactataagaaagccgttgtc ctcaagggctccaacgacctggagctcaaagcagaggggaacaaccgcttcagatacaca gtggtggaggattcctgcgcacaagcgaatggcaagtggggcaagacagtgtttgagtac aggacacagaaaactgcaagacttcctattgtggatatggcccctgtggacattggcggc ccagatcaagagttcggcatcgatatcgggcccgtgtgcttcttgtaa

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