KEGG   Clinocottus analis (woolly sculpin): 137782860
Entry
137782860         CDS       T10471                                 
Symbol
wdr3
Name
(RefSeq) WD repeat-containing protein 3
  KO
K14556  U3 small nucleolar RNA-associated protein 12
Organism
cana  Clinocottus analis (woolly sculpin)
Pathway
cana03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:cana00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    137782860 (wdr3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cana03009]
    137782860 (wdr3)
Ribosome biogenesis [BR:cana03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    137782860 (wdr3)
SSDB
Motif
Pfam: Beta-prop_WDR3_2nd Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40 Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd WDR55 WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Utp12 NBCH_WD40 Beta-prop_TEP1_C DSE1_N Beta-prop_WDR41 Beta-prop_WDR75_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_VPS8 Beta-prop_NOL10_N CFAP251_N PEP5_VPS11_N Beta-prop_Aladin ASA1 Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_DCAF4 Beta-prop_EIPR1 WDR54 Beta-prop_HPS5 Beta-prop_ACSF4 VPS11_N RMC1_N Beta-prop_NWD2_C WD40_like Beta-prop_WDR75_2nd Beta-prop_LRRK2 PAC11 Beta-prop_RIG_1st Beta-prop_WDR19_2nd
Other DBs
NCBI-GeneID: 137782860
NCBI-ProteinID: XP_068428637
LinkDB
Position
Unknown
AA seq 945 aa
MGLTKQYLRYAASAVFGVIGGQKANVAYVTLRGGERGRYVAAAACEHVFVWDVRKGEKVL
ILPGQKHEVTFLCPSPDAVHLAVGYEDGAVRIFSLLSGESSVSFNGHKSAISVMRYDALG
ARLVTGSRDTDVIVWDIINESGLYRLRGHKDVITQALFLKDRNLLVTSSKDSFVKWWDLD
TQHCFKTMVGHRSEVWSMVLLNQESRLLTGSADSELRAWDMSYLQEEKAEGEPTVKKGKT
DDEDDKEALEEEEEVDESPEERILSCQKAGSILREARDRVVSLAADAKARVLACHGNDSV
LELFTVLSEDEVQKRMTKKTKKAKKKAAKAQEAAGSEPAAAGEAAVERTLTDEILRLTSI
KASDKIRWVDILSCASGELKVALLLQNNTIEAYSLRPADRTPAPNKTARLTLAGHRSDVR
TLAFSSDNLAVLSASGDTVKVWNRTTLQVIRTMACEYALCSLFVPGDRQIILGTKSGKLQ
IFELASGSLLETVDAHHGSLWSMCLAPDQRGIVTGGADKTVKFWEFELITGEATGQKRLT
LKHTRTLQLEEDVLCVKFSPDHRLLAVSLLDSTVKVFYTDSLKFFLSLYGHKLPVLCLDI
SHDSSLIATGSADRNVKIWGLDFGDCHRSMFAHDDSVMFLQFVPKTHLFFTAGKDKKIKQ
WDADKFEHIQTLEGHHREVWCLAISPNGDHIVSASHDKSMRLWERTREPIILEEEREMER
EAEFEESMATGDAPVVPGETQGEAAPAAKKTVETVKAAERIMEALELHKEEERKMEEHKY
ASMTAVNKLPLPKPNPILVAFGNISPARYVLDVIKKVRSSELEVSLLVLPFPYVPQLLTL
FNGFMQLGLEVELVCRCLLFLLKIHFGQICGHQTLLPVVDELRSNTVTRVQEIRHVMGFN
AAALQFLQREIESKEDVMFFADATGQLAARKRRRRKRERAVLTVA
NT seq 2838 nt   +upstreamnt  +downstreamnt
atgggcctgacgaagcagtacctgcgctacgccgccagcgccgtgttcggcgtgatcggc
ggccagaaggccaacgtggcgtacgtgacgctgcgcggcggcgaacgcgggcgctacgtc
gccgcggccgcctgcgaacacgtgttcgtctgggacgtccggaaaggagagaaggtcttg
atcctgccgggccagaagcacgaggtcaccttcctctgcccctcgccggacgccgtgcac
ctcgccgtcggctacgaggacggcgccgtgcggatcttcagcctgctgagcggcgagagc
agcgtgtccttcaacggacacaagtccgccatcagcgtcatgcgctacgacgcgctcggc
gctcggctcgtcaccggctccagggacacggacgtgatcgtgtgggacatcatcaacgag
tcggggctctaccggctgcgcggacacaaagacgtcatcacgcaggcgttgttcctgaag
gacaggaacctcctggtcaccagctccaaggacagcttcgtgaagtggtgggacctcgac
acgcagcactgcttcaagaccatggtgggccatcgcagcgaggtgtggagcatggtgctg
ctgaaccaggagagccggctgctgaccggctcagcagacagtgagctgcgagcctgggac
atgagctacctgcaggaggagaaagctgagggagagccgacggtgaagaaggggaaaact
gatgatgaagacgataaagaagctcttgaggaagaggaagaggtggatgaaagtcctgag
gagaggatcctgagctgtcagaaagccggctccatcctgcgtgaggctcgagaccgcgtc
gtctcgctggcggcggacgccaaggcccgagtcctcgcctgccacggcaacgactcggtc
ctggagctcttcaccgtgctgtcggaggacgaggtgcagaagaggatgaccaagaagacc
aagaaagccaaaaagaaggcggccaaggctcaggaggcggcgggcagcgagccggcggcg
gcgggcgaggcagcggtggagcggacgctgacggacgagatcctccggctgaccagcatc
aaagcctcagacaagatcagatgggtggacatcctgtcgtgtgcgagcggcgagctgaag
gtggcgctgctgctgcagaacaacaccatcgaggcctacagcctgcggccggcggaccga
acccccgcgcccaacaagacggcgcgcctcacgctggccggccaccgcagcgacgtgcgc
acgctggccttcagctccgacaacctggccgtgctgtcggcctccggcgacacggtgaag
gtgtggaaccgcaccacgctgcaggtgatccgcaccatggcctgcgagtacgcgctctgc
tcgctcttcgtgcccggagaccggcagatcatcctgggaaccaagtccgggaagctgcag
atcttcgagctggcctctggaagcctcctggagacggtggacgcccatcacgggtccctg
tggtccatgtgcctcgcccccgaccagagggggatcgtcacaggaggtgcagacaagacg
gtgaagttctgggagtttgagctcatcacaggagaagcgaccggacagaagaggctgacg
ttgaagcacacgcgcacgctgcagctggaggaagacgttctgtgtgtgaagttctctccg
gaccaccggctgctggccgtgtctctgctggactccaccgtcaaggtgttctacacagac
tccctgaagttcttcttgtctctgtacggacacaagctgccggttctctgtctggacatc
tcacacgacagctcgctgatcgccaccggctccgccgaccgcaacgtgaagatctggggt
ttggacttcggcgactgtcaccgctccatgttcgctcacgacgacagcgtcatgttcctg
cagttcgtccccaagacgcatctgttcttcacggcggggaaggacaagaagatcaaacag
tgggacgccgacaagtttgagcacatccagacgttggagggccaccaccgggaggtctgg
tgtctcgccatcagtcccaacggagaccacatcgtgtcggcgtctcacgacaagtccatg
cgtctgtgggagaggaccagggagccaatcatcctggaggaggagcgggagatggagcga
gaagcagagtttgaggagagcatggccaccggagatgctcctgtggttcccggagagact
caaggagaagcggcgccggccgccaagaagaccgtggagacggtgaaagctgcggagcgc
atcatggaggctctggagcttcacaaggaggaggagcggaagatggaggagcacaaatac
gcctccatgacggcggtgaacaagcttcctcttcccaaaccgaaccccatcctcgtggcg
tttggcaacatttccccggcgcgctacgtcctcgacgtcataaagaaggtccggtccagc
gagctggaggtttccctgctggtgctgccgttcccgtacgtcccgcagctgctgacgctg
ttcaacggcttcatgcagctcggcctggaggtggagctggtctgccgctgcctgctgttc
ctcctcaagattcacttcgggcagatctgcggtcaccagacgctgctgccggtcgtagac
gagctgcggagcaacacggtgacccgagtgcaggagatcagacacgtgatgggcttcaac
gccgccgcgctgcagttccttcagcgggagatcgagagcaaagaggacgtgatgttcttc
gccgacgccacgggccagctggcggcgaggaagaggaggaggaggaagagggagcgcgcc
gtgctgaccgtcgcttga

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