Clinocottus analis (woolly sculpin): 137783026
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Entry
137783026 CDS
T10471
Symbol
si:ch211-269e2.1
Name
(RefSeq) cohesin subunit SA-2 isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
137783026 (si:ch211-269e2.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cana03036
]
137783026 (si:ch211-269e2.1)
Chromosome and associated proteins [BR:
cana03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
137783026 (si:ch211-269e2.1)
BRITE hierarchy
SSDB
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Paralog
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
MerR-DNA-bind
Motif
Other DBs
NCBI-GeneID:
137783026
NCBI-ProteinID:
XP_068428875
LinkDB
All DBs
Position
Unknown
AA seq
1224 aa
AA seq
DB search
MIPDPTAAAASRATEQDKNPHDEANSSGAINQSEDESGNENRQKSARRRKRPHEGSENVK
RKSARAGRGGAGGAGGSRGKRRRVEAVTLFEVLTMGRSAMQAVIDDWIEAYGKKRDSSLL
DLISFFIQCCGCKGKQKTSTHTHTHKHKHIHTHTQNTHNQVYVCLLSLPGVVTAEMCQSK
DDSEVMSKMVEELDEDAGLQYKKFLAFPWILTVTWPMDTDSVEYPLTQPGPYGRWFHSEF
CDFVAVLVARCQHSVVFDSYLMTTLISLLTELSDSYVRPFRHTCTLAAVKLLSSLVAVAL
SLSVGIENSQKLYQVQKTKPVRQRSPPQLERIQRKIAELREKRAEIESMMDVIFKGIFLK
RYRDVLPEIRSICMEELSLWMKLYSSAFLNDSYLKYMGWMMHDKVPDVRLKCVLGLQGLY
GDPPLLPKLDLFTTRFKARMISMTLDKDGEVAVQTMKLLLLVSKASDGALGPGDYKQLLQ
FVFSSQRPLAAAAGELLFARVLDTEARASDTQEEINAEAAHERQASARLRALLHFYQKSE
LHKHVVYLVDSLWDCAGDLLKDWNTLTSILLQDASPHGPGLTQAEQAVVVEILVASVRQA
SEGPALAGRSGAKKVMSSREKKVQVDDCTKLTAHLLVVLPQLLSKFSGSCDTVASLMKIP
QYFLPECHEAGSTQAASGLMAELGAALDRHPDPDPALLEAAARTYLSLCAEGEAPWCSVT
RTARDSLVRRWVDRLTALLGDSLQGESPRFSADGEKTAEILATLKKLGAFHNCHNLLEWD
LFGLLSPLLSAESGEGGAPPEVLLEVLRCLSSCMLWSLNTSGGTLNSREKAVSQRLQLRL
FCERGNHCLSHSDHRVQQQAFLGVCDVLTAHSYQLQVWDPASFGPLLYTPSPKLQRALLI
FVCAHVFVGPDCDGQSAAAEDSELERLEELHRRRNLLAAFCKLIVHGVLEMSMAAEVFTH
YMKYHNDFGDIIKETMYRTRQMDKMDSARTLVLSLQQLFVRLKREQEGGSRAHPGVQTFT
SIKELARRFALTFGDLVKFRECVVVIHRNGIDFVFQEFSQTPDAPTPPYLSYLTILGEFS
SKLLKPDKKIVFSYLQKHTAEHIVDLREECWQPLIYYRASLLAAAEGEDAASYVSSDRKP
YLPGRSAFSKTKPEESKSPCPFSPVDSKVSKGHRSSFSPSHQEQTADADPFAIPDELPAK
RLNFEGSDASTGSKAEDDTVDVEL
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgatcccggaccccacagctgcagccgcatccagggccacggagcaggataagaaccct
cacgacgaggcaaactcctccggggccatcaatcaatcggaggacgagtcggggaacgag
aacaggcagaagagtgcaaggcgaaggaagcgaccacacgagggctccgagaatgtcaag
cgcaaaagtgcccgagccggccgcggcggcgctggcggcgcggggggcagccggggcaaa
cggagacgcgtggaggccgtcaccctgttcgaggtgctcaccatgggcaggagcgccatg
caggcggtgatcgatgattggatcgaggcttacgggaaaaaaagagactcttctctcctc
gatctcatcagctttttcattcaatgctgcggttgcaaaggcaagcagaaaaccagcaca
cacacacacacacacaaacacaaacacatacacacacacacacagaacacacacaatcag
gtatatgtttgcctcctgtctctcccaggtgtggtcacagcagagatgtgtcagagcaaa
gatgacagtgaagtcatgagcaagatggtagaggagctggatgaggatgctggtctgcag
tataagaagttcctggcctttccgtggatcctcacagtcacgtggcccatggacacagac
agtgtggagtatcctctgactcagcccggaccgtacggccgctggttccactccgaattc
tgcgactttgtggcggtgctggtggctcggtgtcagcacagcgtcgtcttcgacagctac
ctgatgaccaccctcatctctctgctcacggagctgtcggactcctacgtgcggcctttc
agacacacctgcacgctagcggcggtgaagctgctgagctccctggtggccgtggccctg
agcctgagcgtcggcatcgaaaacagtcagaagctctaccaggtgcagaagaccaagccc
gtgaggcagaggagcccgccgcaactggaaaggatacagaggaagatcgcggagctgcgg
gagaagagggcggagatagagagcatgatggacgtcatcttcaaagggatctttctcaag
agatatcgcgatgtgcttccagaaatccgctccatctgcatggaggagctgagtttgtgg
atgaagctctacagttccgcgtttctcaacgacagctacctcaagtacatgggctggatg
atgcacgacaaggtcccggacgtgcgtctcaagtgcgtgttaggcctccagggcttgtat
ggcgatcctccgctcctccctaagctggacctgttcaccacccgcttcaaggcccggatg
atctccatgaccctggacaaggacggcgaagtggcggtgcagaccatgaagctgctgctt
ctcgtctccaaagcgtccgacggtgcgctcggcccgggggactacaagcagctgctccag
ttcgtcttctcctcgcagcgtcccctcgccgccgccgctggggagctgctcttcgcccgg
gttctcgacaccgaagcgcgtgcgtctgatactcaggaagaaataaacgcggaggcggca
cacgagcggcaggcgtcggccagactgagggctctgctgcacttctaccagaagtctgag
ctgcacaagcatgtggtgtacctcgtggacagtctgtgggactgtgctggagacctgctg
aaggactggaacacactgacgtctatactgctgcaggacgcctccccacacggcccaggt
ctcacccaggcagaacaagcggtggttgtggagatcttggttgcttcggtgcgtcaggcc
tcggagggaccggcgctggcaggaaggagtggagccaagaaggtaatgagctccagggaa
aagaaagtccaggttgatgactgcacgaagctcactgctcatctcctcgtggtgcttcct
cagttactgtccaagttttcaggtagctgtgacaccgttgcctccctgatgaagatccct
cagtacttcctccccgagtgtcacgaggccggcagcacacaggcagcatccggcctgatg
gcggagctgggagccgctttggaccgccacccggaccctgaccccgccctgctggaggcg
gcggcccgcacgtacctcagcctgtgtgcggagggggaggcgccctggtgctccgtgacc
cggaccgccagagactccctggtccggcgctgggtggaccgcctgacggctctgctgggg
gactcgctccagggcgagagtccgcgtttctctgctgacggggagaaaacggcggagatc
ctggccacgctgaagaaactcggagctttccacaactgtcacaacctcctcgagtgggac
ctgttcgggctgctgtctcccctgctgtcggcggagagcggcgagggcggggccccgccc
gaggtgctgctggaggtcctgcgctgtctgtcgtcctgcatgctctggtccctcaacacg
agcggtggaactttaaactccagagagaaagctgtgtcccagaggctccagctgcgtctc
ttctgtgagagaggtaatcactgtctctcccactctgaccacagagtgcagcagcaggcg
ttcctgggcgtgtgcgacgtcctgacggctcactcctaccagctgcaggtgtgggatccc
gcctccttcggcccgctgctctacactcccagccccaaactgcagagggcgctgttgatc
ttcgtctgcgcgcacgtcttcgttggaccagactgtgacggccagagcgctgctgccgag
gactctgagctggagcggctggaggaacttcacagacgcagaaatctgctcgcggccttc
tgcaaactgatagtgcacggcgtgctggagatgagcatggcggcggaggtgttcacgcac
tacatgaagtaccacaacgacttcggagacatcatcaaggagacgatgtaccggacgaga
cagatggacaagatggacagcgctcgcacattggtgctcagtttgcagcagctgtttgtc
cgtctgaagcgagagcaggagggcggcagcagggctcacccgggggtccagaccttcacc
agcatcaaggagctcgccaggcggttcgccctgaccttcggggacctcgtcaagttccgc
gagtgcgtcgtcgtgatccacagaaacggcatcgacttcgtcttccaggagttcagtcag
acccctgacgccccgacgccgccgtacctctcctacctgactatcctcggcgagttctcc
agcaaactcctcaaaccggacaagaaaatagtgttctcctacctgcagaagcacaccgcg
gagcacatcgttgacctcagggaggagtgctggcagccgctcatctactaccgagcgtcc
ctgctggccgcggccgaaggggaagatgccgcgtcttacgtgagctccgacaggaagccg
tacctgcccgggcgctccgccttctccaaaacgaaaccggaagagagcaagtccccctgc
ccgttcagccccgtcgactccaaagtcagcaaaggtcacaggtcgagcttcagtcccagc
caccaggagcagacggccgacgcggatcccttcgccatccccgatgaacttccggcaaaa
aggttgaacttcgagggatccgacgccagcaccggcagcaaggcggaggacgacaccgtg
gacgtcgagctgtaa
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