Clinocottus analis (woolly sculpin): 137783211
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Entry
137783211 CDS
T10471
Name
(RefSeq) collagen alpha-3(VI) chain-like
KO
K06238
collagen type VI alpha
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04510
Focal adhesion
cana04512
ECM-receptor interaction
cana04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137783211
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137783211
09142 Cell motility
04820 Cytoskeleton in muscle cells
137783211
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cana04147
]
137783211
00536 Glycosaminoglycan binding proteins [BR:
cana00536
]
137783211
Exosome [BR:
cana04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
137783211
Glycosaminoglycan binding proteins [BR:
cana00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137783211
Hyaluronan
Extracellular matrix or blood plasma proteins
137783211
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
Kunitz_BPTI
fn3
DCX
Motif
Other DBs
NCBI-GeneID:
137783211
NCBI-ProteinID:
XP_068429109
LinkDB
All DBs
Position
Unknown
AA seq
2884 aa
AA seq
DB search
MYNGSPQIKFTLSSFTSKSSVLEAVKGLTYSGGDESNLGLALEEVAESLLSQTSGGRADE
GVPQMLVVVSAGPSTDDTGVGDRALKRAGVITFGVTIGDTATADLEAVATDKSFVLSAPN
FRAVPSMGDQLLPYINGVVQRTIIVQTEFTEVLAVGRRDIIFLIDSTMGATIINSVREFI
KRFVDIMPIGPDQVQVGVAQFSNIPRLEMDLNSHGSKEELISALGSIKPRPGQTINIGAA
LDFVRTKMVRPEKGSRIQQGVPQVLLLMTSKRSSDSVEEPALALQRLGVLTLAAGSKSAD
EQELRKIAFAESVAFYMKDFRVLLRSPKAIVDALSTLAGVVVTEVPTEPVVEITTVQTQK
VVRDIVFLVDGSNYIGSTNLPYVRDFIINVVNQLDVRPDRVQIGLLQFAESPKIEFYLNS
YTTRQDVVNKISQLSLTGGSVLNTGAALDYALVNMFKSSTGSRRRQGVQQVLVLITGGPA
QDQVKAVADKLALSGVLTFTVTSGQADEGLMKSVAFVPDLAYHETSFSNLPAMAEQIMPK
LITVVGDTDVTTFPEETVVVGAERDVAFLIDGTENVRADFAFIRDFIIKVIEPLDIGSDS
VRVSVVQHSERPTPTFYLDTYQTKDEVIRAVNGMTLAGGRSLNTGTALKFMKDTILSERH
GSRVARNVPQFLIVLTGSKSRDNVKDSASALKTTGVVPFGVGVKDADPKQIAAISHNPSF
AFNVREFSELSSIPQKLNNYVRLPREELTQVLQQAEMQGPRKDIVFLVDGSDGVGRDFPI
IQEFIRRIVETLNVGENKIRIGVVQYGDFAQADMFLNTHTTKEGVLQAVRDMRQRGGTQR
NLGQALQFVSQDVLTMTRGSRQQEGVPQFVIVVSSGSSTDDISNAASSLKRSRVLPFSIG
TRDVNPTELRVVSYVPNFAFTIDDLPGLYTVQENLITTITELSDDDITRMRPVFPTIDVI
TSAPTGGEKRDVVFLIDGTTAVRSEFPSIREMIRRVVEKLDVGLDKVRISVVQYSDVPKM
EFLLNEFSTKDEVRQAVTKLRSKGGDRLNTGRALEWVYRNIYQRSAGSRIEDGVPQFLIL
VTGGKSTDDVSAAAEQLKRNRVAPLAIGSRNADAEELRQISLKPELVYTVDSFQQLPRVE
SQLIDSVRTTTTTDIINSYVPTTVDLGNLNLGRKDIIFLIDGSDSTGAAGIAHIRDFILN
IVKQLDVQPDQVRVGVVQYSDNVKTEFSLNSHNNKPAVVSAIKRLRQMGGRSSDLADAIE
YVIQNELKPAAGVRQEASQHLVVLTGGRSPQDVSIYGPLLKGSRVNCIGVGAANADPRQL
TQIATTSADVLQVPDFPGLSAIRQGVIDRLSGTIPEEPPTDYENPTSGLPPPKKADIVFL
VDGSINLGRDNFKEVKMFITNLIDLFFTERDNLRIGLAHYAADVTDVFYLDTYQNRQDIL
SAVGRAEYKGGRKINTGAAIRHVQDVFFTKDKGSRMDEGTPQILMVLTGGRSADDGKTAA
LGLKKKGVRVFAIGVGDIENELEDLASESSTVARASTFLELSELNEQILETLDDEVKGSL
CVGAQAPTKTCSIEVLVGFDVSAQNIFSAQPNLQVKVEAILKTISKMAAISCSSGQIPSV
QVGMLALDSASEPVQLDFTDKAGDLFEAFKALQSRGPFVLNGKTISSYTNRFKTRQDDVV
KVVVHLTDGIDASFGELKKQVEELRMSGVNSFILVGLERVPNFEEALLLEFGRGFRYTRP
LRLNIMDLDYELMEELDHIAERECCAVPCKCIGTRGNRGAVGVSGTKGGPGSPGSQGHPG
DEGGPGERGPPGVNGTQGFQGCPGQRGVKGSRGYSGEKGEFGEIGLDGINGEDGKSGVAG
PSGEGGNPGQRGPKGTKGQAGDRGEMGTRGDPGVSGKDNNRPGVKGDPGDAGPAGEPGED
GQKGGPGELGRVGANGRRGQPGKAGNPGAPGAGGVQGEPGIGGSRGPSGPIGAPGPRGED
GNPGPRGPGGNAGSAGDKGRRGTLGRKGEPGEPGPKGVIGPLGPRGESGEDGQDGFGVAG
PKGRKGDEGFPGFPGLKGAAGDPGTKGGPGRRGNPGQRGVSGNIGTPGQKGEFGYPGPYG
QKGPRGPGVVQCDLVKKIRENCPCCYGKQECPLYPTELAFALDASEGVGSAFNNMRDTVL
NLVKDITISESNCPRGARVALTLYSNEVTTEVRFADAMKKRALVQRIEGLQNLQTRKPRN
LETAMSFVAQNTFKRVRSGFLMRKVAIFLVGGPVSQAQTVTNAALRLHDAGIATLFLVTR
EDRALTKALQVNNTALAQVIVLPNAGSAQYKSVLQKVMNCHVCLDICSPDQMCDYVPPVV
SRDRRSSTTDVDIDMAFVIDSSESTYPIVFTEIKRYIAHIVEQLQVSSNPTSSVNHARVS
VIQQAPYEFTNNKTGSPIHVDIGLTEHHSAQEVVKFLLEKTPQLEGGRALAAAIESTVEQ
VFEKAPLHRDRKVLLLFVTGSVEGEEEQLVRIATEVKCRGYFLVIMGVGEKLSAGDARVL
SRMASEPSDVFFKRLDSISNFYDKHFQTFGQLLPKYISIENAFFMSPEVSKNCKWFQSDQ
PLKNPFTSSQQQEKHQKRHENHQAVHQRKHKDANELHVFNVTSSSLKLRWTSPDPKLFVY
FEVVVMRLHDHALVLNTNVSGTELSVDNLESAQTYHAVVTARTAEGQTVSTRKGIMTTRA
ADHKPEQKPASRGPMIVNTTPLDKPETVDEFADPCSLDSDPGMPCKDYQAKWFFDRKNEI
CTQFWYGGCGGNDNRFDTEALCLKHCMRSVPEPQQNVQQVEQLEILPTPADSPAVDICQL
PKEEGTCAKFVLKWHFDAPSKSCARFWYGGCGGNQNRFDTHQQCAEACEKPAPLNQGVMA
AIRT
NT seq
8655 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacggcagtccacagataaagttcactctaagtagctttaccagcaagtcgtca
gtcctggaagcggtgaagggccttacctactcagggggtgacgaatctaatctggggctc
gccttggaggaagtggccgagagcctgttaagccaaacatctgggggcagggcagatgag
ggtgtgccccagatgttggtggttgtcagtgctggtccatccactgatgatactggtgtc
ggtgaccgggctcttaagagggccggcgttatcacattcggcgtgacgattggtgacact
gccactgctgatctggaagcagttgctacagataaaagttttgtcctgtcggccccaaat
ttcagagcagtgccgagcatgggtgaccagctgctcccatacattaacggggtggtccag
cgcaccattatagttcagactgagttcacagaagttttggctgttggaagacgagacatc
atcttcctaattgacagtacaatgggtgcaacgatcatcaactctgtgcgcgaattcatc
aagcggtttgtcgacatcatgccaattggccctgaccaagttcaagtgggtgtggcccaa
ttcagcaatatccctcgacttgagatggatctaaactcccatggctccaaggaggaatta
atttctgctctgggctctatcaaaccaagacctggccagacaatcaacattggagctgct
ttggactttgtgcggacgaaaatggtacggcctgagaagggaagtcgtattcaacagggg
gtaccccaggttctactgttgatgaccagcaaaaggtccagtgacagtgtggaggaaccc
gctctggccctgcagcgactgggtgtattgactctagctgcaggctccaaaagtgctgat
gagcaagagctacgaaagattgcctttgcggaaagcgttgcattctatatgaaggacttc
cgcgtactgcttcgcagcccaaaggcaattgttgatgctctctccactctcgctggggtg
gtggtgactgaggtacccactgagccagtggtggagataaccacagtgcagactcaaaaa
gtggttcgagacattgtcttcctcgttgatggctcaaactacattggcagcactaacttg
ccctatgtgagagatttcattatcaacgtggtcaaccagctggatgtacgtcctgacagg
gttcagattggtctcctgcagtttgctgagagtccaaaaattgaattttacctgaacagc
tataccaccaggcaagatgttgtgaataaaatatctcaactcagtctgactggaggctca
gttttgaatacaggagctgctttggactatgcgttggtcaacatgttcaagtcctcaact
ggctcacgcaggaggcagggagtccagcaggtgttggttctgattacaggtggtccagcc
caggaccaagttaaagctgtagccgataaattggctctgtctggtgttttgactttcacc
gtcacttccgggcaagcagatgaaggcctaatgaaatcagttgcgtttgttccagatttg
gcttaccatgaaacaagcttctctaatttgccagccatggcagaacaaatcatgccaaag
ttgataacagtagttggtgatacagatgtgacaacattccctgaggaaactgttgttgtt
ggagctgaaagggacgttgcctttctcattgatggcacagaaaatgtacgagcagatttt
gccttcatccgggattttatcattaaagtaattgaaccacttgacattggaagtgacagt
gtgcgagtttcagtggttcaacacagcgagaggccaactccaactttttaccttgacacc
tatcaaaccaaagatgaggtgataagagctgtgaacggaatgactcttgctggaggacgt
agcctaaacacaggaactgctctaaaattcatgaaggacaccattttgtccgaaaggcat
ggtagccgggttgcacgaaatgtccctcagtttctaatcgttttgactggaagcaagtcc
agggataacgtgaaggattctgcgagtgcactgaagacgacgggagttgtaccatttggt
gtcggtgtcaaggatgcagacccaaagcagatcgcggccatttcacacaacccttccttt
gccttcaatgtgagggaattcagtgagctcagtagcataccacaaaagctcaataactat
gtgcgactcccaagggaagagctgacacaagttctacaacaagctgagatgcagggcccc
cgaaaggatattgttttccttgtggatggatctgatggtgttggacgagatttcccaatc
atccaggagtttatccgaaggattgtagagactctcaatgtgggcgagaataagatccgg
attggtgtcgttcagtatggtgactttgctcaagctgacatgtttctaaatacacataca
actaaagaaggtgttttgcaagccgtcagggatatgaggcaacgtggaggaacacaacgt
aacctggggcaggccttgcagtttgtcagtcaggatgttctgacaatgacacgtggtagt
agacagcaagagggtgtaccacagtttgtaattgtcgtctccagcgggtcttcaacagat
gacatcagcaatgcagcgtcttccctcaaacgatccagagttcttcccttcagcatcgga
accagggatgttaacccgacagagctacgggtggtgtcatatgtgccaaactttgccttc
actattgatgaccttcctggcctgtacacagtccaagaaaacctaatcaccactattact
gagctgtcagatgatgacattaccaggatgcgtccagtattcccgaccattgatgtaatc
acatcagcacccacgggaggagaaaagagggatgttgtatttctgatagatggcaccaca
gcggtgcgtagtgagtttccttccattcgtgaaatgataagaagagttgtggagaagcta
gatgtaggattggataaggtcagaatttcagtggtacaatacagtgatgttccgaagatg
gaatttctactgaatgaattctccaccaaagatgaggtacgtcaggctgtgacgaaactt
cgaagcaaaggtggagaccgtctaaacacaggtcgtgctctcgagtgggtctatagaaac
atctaccaaaggtcagctggaagccgcattgaagatggtgtgccccagttcctgattcta
gttacaggtggcaagtctacagatgatgtatctgctgcagctgaacaactgaagagaaac
cgggttgcacctcttgccattggttcaaggaatgcagacgctgaagaactgagacagatt
tccctgaagcctgaactggtatatacagttgacagtttccagcagcttccaagagtggag
tcgcagctcattgattcagtcagaacaaccaccaccactgatatcatcaacagttatgtt
cctaccacagtagacttaggcaatttaaatcttgggaggaaggacattattttccttatt
gatggctcggacagtacaggtgctgccggcattgcgcatatccgtgacttcatacttaat
attgtcaaacaacttgacgtgcaaccggatcaagtgcgtgtcggggttgtccagtattca
gacaatgttaaaacagagttctcgcttaactctcacaacaacaagccagctgtggtctct
gctatcaaaagacttcgtcagatgggtggccggtcttcagatctagctgatgccattgag
tatgttatacagaatgagttaaaacctgcagcaggggttcgtcaagaggcctcccagcat
ctcgtggttctcacaggtggacgatccccccaagatgtttccatctatggacctctgctt
aagggcagtcgtgtcaactgcattggtgttggagctgctaatgctgacccaaggcagcta
acccaaatagccaccacctcagctgatgttcttcaggtccctgacttccctggcctgtca
gcaatccgtcaaggggttattgatcggttaagtgggacaattccagaagaaccaccaaca
gactatgagaatcctacatccggcctgcctccacccaaaaaagctgatatagtgtttttg
gtcgatggctccattaacttaggcagggacaacttcaaggaagtgaagatgttcatcacc
aacctaattgatctgtttttcactgagagagacaacctacggatcggcctggcacattac
gccgcagatgtgactgatgtcttctatctcgacacataccagaaccggcaggacatttta
agtgccgttggccgagcagagtacaaaggtggacgtaaaatcaacactggtgcagccatt
cgccacgttcaagatgttttctttacgaaagataaaggcagcaggatggatgaaggaact
cctcagatccttatggttctaaccggaggacgctcagccgatgatggcaaaacagcagcc
cttggtctgaagaaaaaaggtgtgagagtctttgccataggagtgggcgacattgagaat
gagttagaagacttagcaagtgaatcttccactgtggctagagcaagcacctttctggaa
ctctctgagctcaatgagcaaatcctggagactttggatgatgaagtaaaagggagtctg
tgtgttggcgcgcaggcacctactaaaacctgcagcattgaggtgttggtgggctttgat
gtttctgcccagaacatcttcagcgctcagcccaacctccaggtcaaggttgaggccatt
ctgaaaacgatttccaaaatggcagctatcagttgctcttctggccagattccctccgtg
caagtgggcatgctggccctagactcagcctctgagcccgtccagctggactttacggac
aaggctggtgatctctttgaggccttcaaagccctacagagtcgtggcccctttgtcctc
aatggcaagaccatctcatcttacaccaataggttcaaaaccagacaggacgacgttgtc
aaggttgtcgttcatcttactgatggtattgatgcctcatttggtgaattgaaaaagcaa
gttgaggagcttcgtatgtcaggcgtgaacagtttcatcctggttgggctggagcgggtg
cccaattttgaggaagctttgctgctcgaatttggtcggggatttagatacaccagacct
ttacgactcaatatcatggacttggactatgagctaatggaagaactggaccatattgct
gagagggagtgctgtgcagtgccctgcaaatgtatcggcacaagaggaaaccgaggagca
gttggagtttcagggactaagggtggtccgggatcaccaggaagccaaggacatcctgga
gatgagggtggacctggagagagaggtcctcccggtgtgaatggaactcagggtttccag
ggatgtcctggacaaagaggtgtcaagggttctcgtgggtactcgggagagaagggagaa
tttggagaaattggacttgatggcattaatggagaagatggtaaaagcggagtggcagga
ccctcaggtgaaggcggaaaccctggccagagaggtcccaaaggtaccaaaggacaagca
ggagacagaggagaaatgggaaccagaggagaccctggtgtaagtggaaaggataacaac
cgcccaggagttaaaggagaccccggtgatgctggaccagcgggagagcctggtgaggat
ggacagaaaggaggacccggtgaactcggaagagtgggagctaatggcagaagaggccaa
cctggaaaggctggtaatcccggagcgccaggagctggtggtgttcagggagaacctggt
attggaggatcaagaggcccatcaggaccaattggtgcaccaggacccagaggagaagat
ggaaaccctggacccagaggtcctggaggtaacgcaggttccgctggagataagggaaga
agaggaactcttggtcgcaagggtgaaccaggagagccaggacccaagggtgtaattgga
ccacttggtcctcgaggagagtctggtgaagatggccaagatgggtttggcgtggctggg
cctaaaggaagaaagggtgatgaaggcttcccaggattcccaggactaaagggagcagct
ggtgaccctggcaccaaaggaggacccggacgcagagggaaccctggacagaggggtgtc
tctgggaacattggtacacccggacagaagggagagtttggatatcctgggccatatggt
cagaaaggaccgagaggaccaggcgttgtgcaatgtgacctggttaagaaaatcagagaa
aactgtccttgctgttatggtaagcaggaatgcccgctctaccccactgagctggccttt
gccctggatgcctctgaaggtgttggcagtgccttcaacaatatgcgtgacacagtcctg
aacctcgtcaaagatatcaccatctctgagagtaactgtccaagaggagcccgcgtcgct
ttaaccctgtacagcaacgaggtgaccactgaggttcggttcgccgatgcgatgaagaaa
cgtgccctggtgcagcgcatcgagggactgcagaacctgcaaacacgcaagccacgcaac
ttggagacggccatgagctttgttgcccagaacacctttaagagagtgcgcagcggcttc
ctcatgaggaaggtggccatcttcctggtcggtggaccggtcagtcaggcgcaaacagtc
accaacgcagctcttcgcctccacgacgctggtatcgcaactctgttcctggtcactcgt
gaggacagagctctcaccaaagcactgcaggtcaacaacacagcactggcccaagtgatt
gtccttcccaacgctggaagtgcacagtacaagtcagtcctccagaaggtgatgaactgc
catgtctgcctcgacatctgctctccggaccaaatgtgtgactacgttcccccagtggtc
agccgagataggaggtcttccaccactgacgtagacatcgacatggctttcgtcatagac
agctctgagtctacctaccccatagtctttacagagatcaagcgttacatcgcgcacata
gtcgagcagctacaagtgtcgtcaaatcccacatcatccgttaatcatgccagggtgtcc
gtgatccagcaagcaccttatgagttcaccaacaacaaaactggctcacccatccatgtt
gatattggtttgaccgagcaccactcggctcaggaagttgtcaaatttctgctggagaag
accccgcagttagaaggaggccgggccctggcagcagctatcgaatcgactgtggagcag
gtgtttgagaaggcgcctctccaccgtgacaggaaagtgcttttgctcttcgtgacgggg
agtgtggagggagaagaggagcagctggtgcgtattgccaccgaggtcaagtgcagaggc
tacttcctggtcatcatgggtgtgggtgagaagttgagtgctggagacgctcgtgtcttg
tcacgcatggccagtgagccgtcagatgtcttcttcaagcgactggacagcatctcaaac
ttttacgacaagcacttccagacctttggacagcttttgcccaagtatatcagcattgaa
aacgctttcttcatgtcccctgaagtctccaaaaattgcaagtggttccagagtgaccaa
ccacttaaaaatccctttacatcgtcacaacaacaggagaaacatcagaaacgtcatgaa
aaccaccaagcagttcatcaaagaaaacacaaagatgcaaatgagttgcacgtcttcaac
gtcacctccagcagcttgaaattgcgatggaccagcccagaccccaagctctttgtctac
tttgaggtcgtggtgatgcggttgcacgaccatgccctggtgctgaacaccaacgtgtcg
ggcactgagctttccgtggacaacttagagagtgcccaaacataccatgccgtggtcacc
gcccgcactgcagagggtcaaactgtctccacccgcaaaggcatcatgactacgagagca
gcagatcacaagccagagcaaaagccagccagccgaggccccatgattgtaaataccaca
ccgctggacaaaccagaaactgtcgatgaatttgcagacccatgctcacttgactctgac
cctggaatgccgtgcaaagactatcaggctaagtggttctttgacagaaagaacgagatc
tgtacccagttctggtatggaggttgtggaggcaatgacaataggttcgacactgaggcc
ctctgcttgaaacactgcatgaggtcagtgccagaacctcagcaaaacgttcagcaggtt
gaacagttggagatcctcccgactcctgcggactctccagccgtggacatttgccagctt
cccaaagaggaaggtacttgtgccaaatttgtcctcaagtggcacttcgatgcccccagt
aagagctgcgcacgcttctggtatggaggctgcggtgggaaccagaatcgctttgacacg
catcagcagtgtgctgaggcttgcgaaaaaccagcacccctcaaccaaggagtcatggct
gcaataagaacatag
DBGET
integrated database retrieval system
