Clinocottus analis (woolly sculpin): 137783288
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Entry
137783288 CDS
T10471
Symbol
mid1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
137783288 (mid1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cana04121
]
137783288 (mid1)
Enzymes [BR:
cana01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137783288 (mid1)
Ubiquitin system [BR:
cana04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
137783288 (mid1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
PRY
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
TRIM_CC
zf-RING_5
OCD_Mu_crystall
GARS_C
Motif
Other DBs
NCBI-GeneID:
137783288
NCBI-ProteinID:
XP_068429207
LinkDB
All DBs
Position
Unknown
AA seq
690 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSQCTPSEPIQSINAFQCPTCR
YVITLNQRGLEGLKRNVTLQNIIDRYQKASLSGPNSPNETRRERAVPDGKAMTCPGDRVQ
CQFCEQDPPQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPLLDSHLRGLMCLEH
EDEKVNMYCVTDEQLICALCKLVGRHRDHHVAALGDRFDKLKKSSGRFLCVVGRGHSHQE
ADQQALDSNLNSLIKRTSELESLMGKLIQTCQHVEVNASRQENKLLEECDLLITIIQQRR
QLIATKIKEGKSTRMRKLAQQIASCKQCIERSSSLITQADHTLKETDQARFLQMAKSTCD
RVSMATASSQILLPEINLSDTFDTFALDFTREKKMLESLDYLTSPNPPIIREELCTASYD
TITVHWTSEDEFSVVSYELQYAIFTSQSNVVSLCNSADSWMIVPNIKQNHYTVHGLQCGT
KYIFIVKAINQAGSRSSEPGKLKTNSQPFKLDPKSAHRKLRVSHDNLTVERDETSSKKSH
SQDRFTSQSSYGVTGNVYIDSGRHYWEALIGGSSWFAVGIAYKSAPKHEWVGKNSASWVL
SRCNNSWVVRHNSKEMPIEPSPHLRRLGVLLDYDAGLLSFYDAIGVQHLHTFDIAFAQPV
CPVFNVWNRCLTVLTGLPIPDHLEGTDYNN
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgctggagtcagaactgacctgtccaatctgtctggagctcttcgaggacccg
ctgctcttgccctgtgctcacagcctttgtttcaactgtgcccatcgtattctggtctca
cagtgcacgcccagcgagccaatacaatccatcaacgcctttcagtgcccgacctgtcgc
tatgtcattaccctcaaccagaggggcctagagggactcaaacgcaacgttacattacag
aacatcatcgatcgctaccagaaagcttctctgagcggacctaattctcctaacgagact
cggcgcgagcgagccgtccccgacggcaaagccatgacttgtcccggtgaccgggtgcag
tgtcagttctgtgagcaggaccctcctcaggacgctgtcaagacctgcgtcacctgtgag
gtgtcatactgtgacgagtgtctcaaggccacccaccccaacaagaagcctttcacgggc
caccgtctaatcgagcccttgcttgactcccacctgcgaggactcatgtgtctggagcat
gaggacgagaaggtcaacatgtactgcgtgacagatgaacagttgatctgtgcattgtgt
aagctggtgggccgacaccgggaccaccacgtcgctgcccttggagaccgatttgacaaa
ctcaagaaatcgtctggccgctttctctgtgtggtggggcgtggtcattcacaccaggag
gcagaccagcaagctttggattccaacctcaacagtctaatcaagaggaccagtgagttg
gaaagtctcatggggaaactcatccaaacctgccaacatgtggaggtaaatgcgtcacga
caagaaaacaagctgctggaggagtgtgacctgctaattactatcatacagcaacgtaga
caactcatagcaaccaagataaaggagggaaagtccactcggatgaggaaactagcccag
cagatagccagctgcaagcagtgcattgagaggtcttcctccctcatcactcaggccgac
cacactctcaaggagacagaccaagctcgcttcctccaaatggctaaaagcacctgtgac
agagtgtccatggcaacggcctcctctcaaatcctgttaccagaaattaacctgagtgac
acctttgatacttttgctttggacttcacacgggagaagaaaatgttagaaagcttggat
tacctcacatcaccaaatccgccaataatccgtgaggaattatgtacagcttcatacgac
acaatcacagttcactggacatcagaggatgaattctctgttgtatcatatgaacttcag
tacgccatcttcaccagccaatccaatgttgtcagtttgtgcaactctgctgacagctgg
atgattgtaccaaacatcaagcaaaatcactacactgtccacgggcttcagtgtggcacc
aagtacattttcatagtgaaggcgataaaccaggctggaagccgcagcagtgaaccaggg
aaactcaagaccaacagtcaaccattcaagttagacccaaagtcagctcaccggaagctg
agagtgtcccatgacaacctaacggtggagagggacgagacatcgtccaagaagagccac
agtcaggaccgcttcacaagccagagcagctacggtgtcacaggaaacgtctacatcgac
agcggccgccattactgggaagctttgattggaggaagctcatggtttgcagtgggtatt
gcatacaaatcagcaccaaaacatgagtgggtcggcaaaaactctgcttcctgggtcctg
tctcgatgcaacaactcatgggtggtgcgtcacaacagtaaggagatgcccattgagccc
tcaccccatctgcgtcgtcttggagtgctcttggactatgatgctggactgctgtctttc
tatgacgcaatcggcgttcagcacttgcatacattcgatattgccttcgctcaaccagtc
tgcccagtgttcaatgtgtggaacaggtgtttaacagtcctcaccggattgcccatccca
gatcacttggaggggacagactacaacaactga
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