Clinocottus analis (woolly sculpin): 137783540
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Entry
137783540 CDS
T10471
Symbol
setd1ba
Name
(RefSeq) histone-lysine N-methyltransferase SETD1B-A isoform X1
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana00310
Lysine degradation
cana01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
137783540 (setd1ba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cana03036
]
137783540 (setd1ba)
Enzymes [BR:
cana01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
137783540 (setd1ba)
Chromosome and associated proteins [BR:
cana03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
137783540 (setd1ba)
HMT complexes
COMPASS/SET1 complex
137783540 (setd1ba)
COMPASS/SET1 complex (yeast)
137783540 (setd1ba)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SET
N-SET
RRM_1
Motif
Other DBs
NCBI-GeneID:
137783540
NCBI-ProteinID:
XP_068429665
LinkDB
All DBs
Position
Unknown
AA seq
1843 aa
AA seq
DB search
MSKPGEKNRLNEDHGRKQSSSLSNGMDSHPVSGSAAEKRSHHCRSYKLIIDPALKKGQHK
LYRYDGQTFNMPNPGIPPVDIVRDPRIGRLWTKYKETDLPVPTFKIDECYIGPVPPKEVT
FARLNDNIREGFLSDMCKKFGELEHVEILYNPKNKKHLGIAKVVFENVKAAKVAVQSLHK
TSVMGNFIHVELDPKGENRLRYFQLLMNGSYTPQTLPVGGEEAREVSPRSLAEALLACEP
IRRLSESSASAVGATLPPSSSTTPQSQETGYSSLRQDTPQSQGTPHTPRQSGTPFSQDSN
FSSRQSTPAYPSSRPETSGGYKSRRHESKFQDAYNRRPERPQYRSNMYRSTTSEQAPFKQ
HQLTPPEPPPTTPSFTYTPPLPATPNFKSAFSPYQAPLPPAFPPSEPAFHHPAQREGEYL
RPPQPPLAAATDFLPVKDRPETPPIPEPPPEPEPHPTTPPPQTPEHCPSPGSPTLDLERN
SLDSRIEMLLKEKRTKLLPFLEEQDSDTEVRMEGSPISSSSSQLSPIPPYTSGSQGGLQN
SRPSSTGLEDISPTPLPDSDDEEPIPGTASLVKRISSPVQETMSNSDLKDGHFRGHTPVT
EVIETGHQSSGEDMEISDDEMPGTPTSGGDCGQGIVMNSAVSPMQTIPMPPPGFASLPHQ
VGFQLSHHHMAAHSAVSGHPHLAGHPGVPHHMLPPMGPYAHSMMPLVQMELMNCLRWEQW
SSVPMSFQMQQQMLSRMAQTRGPYQYAHFMDSAASVPYGAPYQPVAMGATPAAGAAAAAA
AAAAPGQQWQHPSIPKFNPTVPPPGYETKKEDPHKATVDGVLLVIVKELKAIMKRDLNRK
MVEVVAFRAFDDWWEKKEHSAKVSLTPVKGTEGKEEERPKPKDLMGSSLLENWNKGEGLG
YEGMGLGISLRGAIRLPSFKVKRKDPPEAATAGDNKRARPSTPVDDELEDEDRDRDPAEL
PLDDSKMDADSAAAKRRHSRPLELDSEGEEEVDTSGKEEESLSDREEEPDETPATDRLSS
GKESADEEGDDEDSSSESASSDSSDEDGESSASSKASSVSSAESADSSGYELSSEEEEDE
EEEEEEETAAAVQDVEAEGKEAGTTSSSSSSSISSSDEDGGKAETKAPCAPSGTVPEDAE
EPRSREALSSKLQIRPPSPEAEVKEDVKPSSPKGIPVQKHDISVDVNIPAVKEHVANLRP
PTPTGALPDSDQETKDKGKAEPEEVPVTPGRLAPSRLDANTPAPKTVSASSMRLPLPPHP
AAEGRSLLHLPPGSLPDIPQRARLPTDEDIPRTPGRDLSERTRSLGKSQSTDAVPITPGG
DAPLTGSGLLLISPHIPGSPFSYPAQSPVLSAGVPRTPGRDLTFTPVFPDPTALAFNRKI
STESLDERPVFKEPPISTLPSQAPSAGAEHSVSVPEDLPAGLTVDVPVPSDTAPSKRKPG
RPKGKKTPAVSAADESLELSSEPHDAQLGDLSAQTISALSAKSPHHPSLDFREGEVKPQT
VLPDEEGFLSYEEEAPVIVKPPRRARRGWEELLLGGLSPAASPLRPYFNPRSEFEEMTIL
YDIWNEGIDDEDIRLLQITYEKMLQQDNGNDWLNDTLWVNHPLTNIPRVKKRRRDDGMRD
HMTGCARSEGYYKIDKKDKIKYLQSTKLQLEETPFDTQGMSIPAQVHASTRAGSERRSEQ
RRLLSSFACDSDLLKFNQLKFRKKRIRFCKSHIHDWGLFAMEPIAADEMVIEYVGQNIRQ
VIADMREKRYEEEGIGSSYMFRVDHDTIIDATKCGNFARFINHSCNPNCYAKVITVESQK
KIVIYSRQPINVNEEITYDYKFPIEDEKIPCLCGAENCRGTLN
NT seq
5532 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagccaggggagaaaaacagattgaacgaagaccatggcagaaagcagagttca
agtttgtcgaacggcatggacagtcatcccgtcagcggctcggcggcggagaagcggagt
caccactgtagaagttacaagttgattatcgacccggcgctgaagaagggacagcacaaa
ctctaccgctacgatggacagactttcaacatgcccaaccccgggataccaccggtggac
atcgtccgagaccccaggatcggtcgtctctggactaagtacaaagagacggacctaccg
gtgccgacgtttaagatcgacgagtgttacatcggcccggtgcccccgaaggaggtgacg
ttcgcccggctcaacgacaacattcgagaaggatttctttccgacatgtgcaaaaaattt
ggggaactcgagcacgtggagatcttgtacaatccgaagaacaaaaagcacctgggcatc
gccaaagttgtttttgagaacgtgaaggccgccaaagtggccgtgcagtcgctccacaag
acatctgttatgggaaacttcatccacgtggagctggacccgaaaggtgagaatcgcctg
aggtacttccagctcctgatgaacggcagctacactccgcagaccctccctgttggagga
gaggaggcccgggaagtttcccctcgtagcctggcagaagccctactggcctgcgagccc
atccgcaggttgtcggagagcagcgcgtctgctgttggagcgacattgcctccgagcagc
tccaccactcctcagtcccaggagacgggctactccagcctgaggcaggacacgccccag
tcccagggaacccctcacaccccacgccagtcgggtacgccgttctctcaagactccaat
ttctccagtcggcagtccaccccggcgtacccgtccagccggcccgagacctccggaggc
tacaagtctcgcagacacgagagcaagttccaggacgcgtacaaccgcagaccggagagg
cctcagtaccgcagcaacatgtacagaagtaccacgtccgagcaggctcccttcaaacag
caccaactcaccccaccggagcctccgcccaccaccccctccttcacttacacgccgcct
ctccctgctacgcccaacttcaagtcggccttctcgccttaccaggctcctttgcccccc
gcgttccctccttcggagcctgctttccatcacccagcccaaagggagggggagtacctt
cgacccccgcagccgcctcttgctgctgccacggactttttgcccgtcaaagatagaccg
gaaactcctccgatcccagagccgccgcccgagcccgagccccatccgaccacccctcct
cctcagacaccagagcactgcccctcacctggctccccaacacttgatctggagcgcaat
agcctggattcccgcattgagatgctcctcaaggagaaaaggacaaaactgctgccgttc
ctggaggagcaagactcggacactgaggtgcgcatggagggaagtccgatttcctcctcg
tcctctcagctatccccaattcccccttatactagcggctcccaaggtggcctgcaaaac
tcccgtccctcgagcacaggcttggaggatatcagtccgaccccgctgccagactcggat
gacgaggagccaattccgggaacggcctcgctggtcaagagaatcagttctccggtccag
gagacgatgagcaacagtgacctcaaagatggacattttcgaggccacactcccgttact
gaagtcattgaaacgggtcatcagtcgtcgggcgaagacatggagatttccgacgatgag
atgcccgggaccccgaccagcggtggagactgcggccagggcatcgtcatgaactccgcc
gtgtccccgatgcagaccattcccatgcctcctcccggcttcgcttctctcccgcaccag
gtcggcttccagctctcgcatcaccacatggccgctcactccgccgtctcgggacatcct
cacctggccggtcaccccggagtgcctcaccatatgctgccgcccatgggcccctacgct
cacagcatgatgccgctggtgcaaatggagctgatgaactgcttgcgctgggaacagtgg
agcagcgttcccatgtccttccagatgcagcagcagatgctgagtcgcatggctcagacg
agaggtccctatcaatatgcacattttatggacagcgctgcgtctgtgccctacggggca
ccctaccagcctgtggccatgggagctacacctgcggccggcgcagcggcagcggcggcg
gcagcagcagcacccgggcaacagtggcagcatcccagtataccaaagttcaacccgact
gttcctcctcctggatatgagactaaaaaggaggacccccacaaggccaccgtggacggt
gtgctgctggtcattgtcaaggagctgaaggccatcatgaagagggacctcaaccgcaaa
atggtagaggtggtggctttcagagcctttgatgactggtgggagaagaaggaacactct
gcaaaggtgtcgttgactccagtgaagggtaccgaggggaaggaggaagagcggcccaaa
cccaaagacctgatgggttcgagtctgctggagaactggaacaagggcgaggggctgggc
tacgagggaatgggcctgggcatcagtttgcgaggggccatccgcctgccctccttcaag
gtgaaaaggaaggacccgcccgaggctgcgacggcaggcgacaacaaacgagcgcggccc
tccacgccagtggacgacgagctggaggatgaagaccgggatcgagacccagccgagctc
ccgttggacgattccaaaatggacgccgacagtgcggcggcgaagcgacggcactcgcgg
ccgcttgaattggacagcgagggagaggaggaggtggacacctcggggaaggaagaggag
tcattgtccgacagggaggaggagcctgatgaaactccggcgacggacaggctgtcgtca
ggaaaagagagtgcggacgaggagggtgatgatgaagactcatccagtgagagcgcctct
tcagattcgtctgatgaagatggagagagctcagcttcctccaaagccagctcggtctcc
tcagccgaaagcgcagactcctccgggtacgagttaagctcggaggaggaagaggacgag
gaggaggaggaagaagaggagacggcggcggcagtacaagatgtggaggctgaaggcaaa
gaagcagggaccacctcgtcctcttcgtcttcttcaatttcctcctccgatgaagacggg
gggaaggcagagaccaaggcgccgtgcgctccttcggggacggtcccagaggacgccgag
gagccgaggagcagagaggcgctaagcagcaaactccaaattagacctccgagtcctgag
gcggaggtgaaggaggacgtgaagccttcatcccccaaaggcatcccagtccaaaagcac
gacatcagtgtggacgttaacattcctgcagtgaaggagcatgtagcaaaccttcggccg
cccactcccacgggcgccctgcccgacagcgaccaggagacaaaagacaaaggtaaagca
gagcccgaggaagtacccgtcacccccggtcgattagccccatcccgcctagacgctaac
acacctgctcccaaaactgtctctgcatcttcaatgcgcctccctctccctcctcacccg
gctgcggagggtcgatccctccttcacctgccccccggttccctgcctgacatccctcag
cgggccaggctccccacagacgaggacatcccccgcacgccgggcagggacctgtcggaa
cgcacccgaagtctgggcaagtcccagagcacggacgccgtgcccatcacacctggcggc
gacgccccgctgacgggcagcggccttttgcttatctcccctcacatccccggtagcccc
ttttcctaccctgctcaatcccctgtccttagcgctggagtcccccgcactccaggaaga
gacttaaccttcacccctgtcttccctgaccccacagcgctggcttttaataggaaaata
tccactgagagcctggatgagagacccgttttcaaggagcctcccatcagcactttgccc
agccaggccccgtcagccggagcggagcattcggtcagtgtccccgaagatctgccggct
ggtctcaccgtcgacgtccctgtgccttcagacacggccccatcgaagaggaaacccggg
cgacccaaaggcaaaaagactccagctgtctctgcagccgatgagtctttggagctctcg
tctgagccccacgacgcacaacttggcgacctgtccgcgcaaacgatctccgccctctcc
gccaagtcccctcaccacccgagcctggacttcagggaaggggaggtgaagccccagacg
gtcctacctgacgaggagggcttcctgtcctacgaagaagaggcgcctgtgatcgtgaag
ccgccgcggcgggcgcggcgaggctgggaggagctgctgctgggcggcctgtcccccgcc
gcctcgcccctccggccgtacttcaacccgcgctccgagttcgaggagatgaccatcctg
tacgacatctggaacgaaggcatcgacgacgaagacatacggcttctgcagatcacgtat
gagaagatgctccagcaggataacggcaacgactggctcaacgacacgctgtgggtcaac
catcctcttactaacatcccgagggtgaagaaaaggagacgagacgacggcatgagagat
cacatgaccggctgcgcgcgaagcgagggatactacaagatcgacaagaaggacaagatc
aagtacctccagagcacgaagctgcagttggaggagacgccgtttgacacgcagggtatg
agtattcctgcgcaggtccacgcctccaccagagccggctcggagcggcgctcggagcag
cggcggttgttgtcctcgttcgcgtgtgacagtgacctgctgaagttcaaccagctgaag
ttccgtaagaaaaggatccgattctgcaagtcgcacatccacgactggggtctgtttgct
atggagcccatcgccgcagatgaaatggtgatagagtacgtgggacaaaacatcagacag
gtgatcgcggacatgcgggagaagcgctacgaggaggagggcatcggtagcagctacatg
ttccgcgttgaccacgacacgatcatagatgccacgaagtgtggcaacttcgcccgtttc
atcaaccacagctgcaatcccaactgttatgcaaaggtcatcacagtggagtctcaaaag
aagatcgtgatctactccagacagcccattaatgtcaacgaggagatcacctacgactac
aagttccccatcgaggacgagaagatcccctgtttgtgtggggcggagaactgtcgggga
acgctgaattaa
DBGET
integrated database retrieval system
